Gene annotation
Transcriptome id Sobic.007G089300.1
Synonym CRK12
Functional annotation TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt C5YJI1
Pfam PF01657 PF00069
Panther DB PTHR27002 PTHR27002:SF19
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G11530 : cysteine-rich RLK (RECEPTOR-like protein kinase) 34
RAP-DB (Rice) LOC_Os04g12080.1 : TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a047740
Brachypodium KQK10029
Barley -
Wheat TraesCS5A02G465700 , TraesCS5D02G478700 , TraesCS2A02G145100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G362001 Probable serine/threonineprotein kinase PBL15(PubMedID : 31721651) -
2 Sobic.006G060800 basic proline-rich protein, putative, expressed -
3 Sobic.003G310200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
4 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
5 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
6 Sobic.003G366100 expressed protein -
7 Sobic.010G130800 Acyl activating enzyme 1 AAE1 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed K00666: fatty-acyl-CoA synthase
8 Sobic.005G193600 3 Ketoacyl CoA synthetase 2 KCS2 (fatty acid elongase) (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
9 Sobic.008G181801 - -
10 Sobic.005G085500 - -
11 Sobic.006G246200 protein kinase, putative, expressed -
12 Sobic.002G225600 alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
13 Sobic.002G173900 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
14 Sobic.010G193000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
16 Sobic.009G037200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
17 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
18 Sobic.001G136300 nodulin family protein, putative, expressed -
19 Sobic.003G096500 protein kinase domain containing protein, expressed -
20 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3


Gene co-expression network
sample Sobic007G089300 Sobic007G089300 Sobic001G362001 Sobic001G362001 Sobic007G089300--Sobic001G362001 Sobic006G060800 Sobic006G060800 Sobic007G089300--Sobic006G060800 Sobic003G310200 Sobic003G310200 Sobic007G089300--Sobic003G310200 Sobic002G041800 Sobic002G041800 Sobic007G089300--Sobic002G041800 Sobic008G060300 Sobic008G060300 Sobic007G089300--Sobic008G060300 Sobic003G366100 Sobic003G366100 Sobic007G089300--Sobic003G366100 Sobic010G130800 Sobic010G130800 Sobic007G089300--Sobic010G130800 Sobic005G193600 Sobic005G193600 Sobic007G089300--Sobic005G193600 Sobic008G181801 Sobic008G181801 Sobic007G089300--Sobic008G181801 Sobic006G246200 Sobic006G246200 Sobic001G362001--Sobic006G246200 Sobic001G362001--Sobic007G089300 Sobic009G121600 Sobic009G121600 Sobic001G362001--Sobic009G121600 Sobic005G226100 Sobic005G226100 Sobic001G362001--Sobic005G226100 Sobic001G362001--Sobic008G181801 Sobic001G381300 Sobic001G381300 Sobic001G362001--Sobic001G381300 Sobic009G241500 Sobic009G241500 Sobic001G362001--Sobic009G241500 Sobic005G082700 Sobic005G082700 Sobic001G362001--Sobic005G082700 Sobic005G085500 Sobic005G085500 Sobic001G362001--Sobic005G085500 Sobic006G060800--Sobic008G060300 Sobic009G252100 Sobic009G252100 Sobic006G060800--Sobic009G252100 Sobic006G060800--Sobic002G041800 Sobic004G063200 Sobic004G063200 Sobic006G060800--Sobic004G063200 Sobic001G201800 Sobic001G201800 Sobic006G060800--Sobic001G201800 Sobic004G078600 Sobic004G078600 Sobic006G060800--Sobic004G078600 Sobic006G060800--Sobic007G089300 Sobic001G145050 Sobic001G145050 Sobic006G060800--Sobic001G145050 Sobic002G366100 Sobic002G366100 Sobic006G060800--Sobic002G366100 SobicK044407 SobicK044407 Sobic003G310200--SobicK044407 Sobic001G012000 Sobic001G012000 Sobic003G310200--Sobic001G012000 Sobic003G378301 Sobic003G378301 Sobic003G310200--Sobic003G378301 Sobic001G056400 Sobic001G056400 Sobic003G310200--Sobic001G056400 Sobic003G310200--Sobic008G181801 Sobic006G045000 Sobic006G045000 Sobic003G310200--Sobic006G045000 Sobic002G423600 Sobic002G423600 Sobic003G310200--Sobic002G423600 Sobic004G217700 Sobic004G217700 Sobic003G310200--Sobic004G217700 Sobic003G310200--Sobic010G130800 Sobic002G041800--Sobic005G085500 Sobic002G041800--Sobic004G078600 Sobic002G041800--Sobic002G423600 Sobic004G195800 Sobic004G195800 Sobic002G041800--Sobic004G195800 Sobic002G041800--Sobic009G252100 Sobic002G041800--Sobic004G217700 Sobic002G209100 Sobic002G209100 Sobic002G041800--Sobic002G209100 Sobic002G041800--Sobic006G060800 Sobic002G041800--Sobic001G201800 Sobic008G060300--Sobic006G060800 Sobic008G060300--Sobic009G252100 Sobic008G060300--Sobic005G193600 Sobic008G060300--Sobic001G201800 Sobic002G202700 Sobic002G202700 Sobic008G060300--Sobic002G202700 Sobic007G129201 Sobic007G129201 Sobic008G060300--Sobic007G129201 Sobic005G193500 Sobic005G193500 Sobic008G060300--Sobic005G193500 Sobic008G060300--Sobic004G195800 Sobic008G060300--Sobic003G366100 Sobic003G366100--Sobic008G060300 Sobic003G366100--Sobic003G310200 Sobic003G366100--Sobic007G089300 Sobic002G173900 Sobic002G173900 Sobic003G366100--Sobic002G173900 Sobic003G366100--Sobic005G193600 Sobic003G366100--Sobic002G202700 Sobic003G366100--Sobic001G012000 Sobic003G366100--Sobic003G378301 Sobic003G366100--Sobic010G130800 Sobic010G130800--Sobic003G310200 Sobic010G130800--Sobic003G378301 Sobic010G130800--Sobic008G060300 Sobic010G130800--Sobic006G060800 Sobic001G448300 Sobic001G448300 Sobic010G130800--Sobic001G448300 Sobic010G130800--Sobic007G089300 Sobic010G130800--Sobic001G056400 Sobic010G130800--Sobic001G012000 Sobic003G096500 Sobic003G096500 Sobic010G130800--Sobic003G096500 Sobic005G193600--Sobic009G252100 Sobic005G193600--Sobic008G060300 Sobic005G193600--Sobic001G012000 Sobic005G193600--Sobic001G201800 Sobic005G193600--Sobic008G181801 Sobic006G229500 Sobic006G229500 Sobic005G193600--Sobic006G229500 Sobic005G193600--SobicK044407 Sobic005G193600--Sobic001G381300 Sobic005G193600--Sobic005G193500 Sobic008G181801--SobicK044407 Sobic008G181801--Sobic009G241500 Sobic008G181801--Sobic001G012000 Sobic008G181801--Sobic006G045000 Sobic008G181801--Sobic005G226100 Sobic008G181801--Sobic005G085500 Sobic008G181801--Sobic003G310200 Sobic008G181801--Sobic005G082700 Sobic003G037100 Sobic003G037100 Sobic008G181801--Sobic003G037100
Octagon: transcription factors


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