Gene annotation
Transcriptome id Sobic.005G082700.2
Synonym Sb05g006650
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
NADP-dependent oxidoreductase, putative, expressed
UniProt A0A1Z5RI82
Pfam PF00107 PF16884
Panther DB PTHR11695 PTHR11695:SF572
NCBI CDD KOG1196; Predicted NAD-dependent oxidoreductase
KEGG Orthology K07119; PTGR3, prostaglandin reductase 3
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G03080 : Zinc-binding dehydrogenase family protein
RAP-DB (Rice) LOC_Os11g14910.1 : NADP-dependent oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a051273 , Zm00025a035375 , Zm00025a029568 , Zm00025a015602
Brachypodium PNT65294
Barley HORVU7Hr1G083970.1 , HORVU2Hr1G010250.1 , HORVU2Hr1G010250.2
Wheat TraesCS5B02G303700 , TraesCS5D02G103800 , TraesCS7A02G374800 , TraesCS7D02G348600 , TraesCS2A02G069900 , TraesCS5A02G303300 , TraesCS4A02G229900 , TraesCS7B02G252600 , TraesCS5B02G303800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G241500 expressed protein -
2 Sobic.006G246200 protein kinase, putative, expressed -
3 Sobic.008G181801 - -
4 Sobic.001G136300 nodulin family protein, putative, expressed -
5 Sobic.005G226100 ZOS11-10 - C2H2 zinc finger protein, expressed -
6 Sobic.005G133166 - -
7 Sobic.004G052500 - -
8 Sobic.008G183300 thaumatin, putative, expressed -
9 Sobic.003G037100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
12 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
13 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
14 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
15 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
16 Sobic.002G269032 - -
17 Sobic.002G241250 - -
18 Sobic.009G121600 cytochrome P450 86A2, putative, expressed -
19 Sobic.K044407 - -
20 Sobic.001G362001 Probable serine/threonineprotein kinase PBL15(PubMedID : 31721651) -


Gene co-expression network
sample Sobic005G082700 Sobic005G082700 Sobic009G241500 Sobic009G241500 Sobic005G082700--Sobic009G241500 Sobic006G246200 Sobic006G246200 Sobic005G082700--Sobic006G246200 Sobic008G181801 Sobic008G181801 Sobic005G082700--Sobic008G181801 Sobic001G136300 Sobic001G136300 Sobic005G082700--Sobic001G136300 Sobic005G226100 Sobic005G226100 Sobic005G082700--Sobic005G226100 Sobic005G133166 Sobic005G133166 Sobic005G082700--Sobic005G133166 Sobic004G052500 Sobic004G052500 Sobic005G082700--Sobic004G052500 Sobic008G183300 Sobic008G183300 Sobic005G082700--Sobic008G183300 Sobic003G037100 Sobic003G037100 Sobic005G082700--Sobic003G037100 Sobic009G241500--Sobic008G181801 Sobic009G241500--Sobic005G082700 Sobic009G241500--Sobic005G226100 Sobic009G241500--Sobic006G246200 Sobic001G259500 Sobic001G259500 Sobic009G241500--Sobic001G259500 Sobic006G246200--Sobic009G241500 Sobic006G246200--Sobic001G136300 Sobic006G246200--Sobic005G082700 Sobic001G362001 Sobic001G362001 Sobic006G246200--Sobic001G362001 Sobic006G168000 Sobic006G168000 Sobic006G246200--Sobic006G168000 Sobic004G181200 Sobic004G181200 Sobic006G246200--Sobic004G181200 Sobic009G121600 Sobic009G121600 Sobic006G246200--Sobic009G121600 Sobic006G246200--Sobic005G226100 Sobic002G241250 Sobic002G241250 Sobic006G246200--Sobic002G241250 SobicK044407 SobicK044407 Sobic008G181801--SobicK044407 Sobic008G181801--Sobic009G241500 Sobic001G012000 Sobic001G012000 Sobic008G181801--Sobic001G012000 Sobic006G045000 Sobic006G045000 Sobic008G181801--Sobic006G045000 Sobic008G181801--Sobic005G226100 Sobic005G085500 Sobic005G085500 Sobic008G181801--Sobic005G085500 Sobic003G310200 Sobic003G310200 Sobic008G181801--Sobic003G310200 Sobic008G181801--Sobic005G082700 Sobic008G181801--Sobic003G037100 Sobic001G136300--Sobic006G246200 Sobic001G136300--Sobic005G082700 Sobic001G136300--Sobic009G241500 Sobic006G113900 Sobic006G113900 Sobic001G136300--Sobic006G113900 Sobic007G157100 Sobic007G157100 Sobic001G136300--Sobic007G157100 Sobic001G381300 Sobic001G381300 Sobic001G136300--Sobic001G381300 Sobic001G146500 Sobic001G146500 Sobic001G136300--Sobic001G146500 Sobic001G136300--Sobic005G226100 Sobic008G162201 Sobic008G162201 Sobic001G136300--Sobic008G162201 Sobic005G226100--Sobic008G181801 Sobic005G226100--Sobic009G241500 Sobic005G226100--Sobic003G037100 Sobic005G226100--Sobic001G381300 Sobic002G269032 Sobic002G269032 Sobic005G226100--Sobic002G269032 Sobic005G226100--Sobic009G121600 Sobic005G226100--Sobic005G082700 Sobic005G226100--Sobic006G246200 Sobic005G226100--Sobic001G259500 Sobic005G133166--Sobic005G082700 Sobic005G133166--SobicK044407 Sobic005G133166--Sobic008G181801 Sobic005G133166--Sobic001G012000 Sobic010G210700 Sobic010G210700 Sobic005G133166--Sobic010G210700 Sobic002G173900 Sobic002G173900 Sobic005G133166--Sobic002G173900 Sobic005G133166--Sobic005G085500 Sobic005G133166--Sobic006G045000 Sobic005G133166--Sobic006G168000 Sobic004G052500--Sobic008G183300 Sobic004G052500--Sobic001G259500 Sobic001G018400 Sobic001G018400 Sobic004G052500--Sobic001G018400 Sobic004G052500--Sobic005G082700 Sobic004G052500--Sobic001G146500 Sobic008G183300--Sobic004G052500 Sobic008G183300--Sobic001G259500 Sobic008G183300--Sobic005G082700 Sobic006G113400 Sobic006G113400 Sobic008G183300--Sobic006G113400 Sobic008G183300--Sobic006G246200 Sobic003G037100--Sobic005G226100 Sobic003G037100--Sobic002G269032 Sobic003G037100--Sobic008G181801 Sobic003G037100--Sobic009G241500 Sobic003G037100--Sobic001G259500
Octagon: transcription factors


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