Gene annotation
Transcriptome id Sobic.006G065900.1
Synonym Sb06g015290
Functional annotation expressed protein
UniProt C5YFR7
Pfam -
Panther DB PTHR33270 PTHR33270:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G27830 : -
RAP-DB (Rice) LOC_Os02g32580.1 : expressed protein
MaizeGDB (Corn) Zm00025a011558
Brachypodium -
Barley HORVU2Hr1G072120.3 , HORVU2Hr1G072120.1
Wheat TraesCS2B02G308300 , TraesCS2D02G289800
Populus -


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cDNA sequences
Sobic.006G065900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G025900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
2 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
3 Sobic.004G251300 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
4 Sobic.002G201900 transporter family protein, putative, expressed -
5 Sobic.005G072200 lipase, putative, expressed -
6 Sobic.003G002600 -(PubMedID : 23001790)@GLK2(PubMedID : 24676859)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
7 Sobic.003G359900 C2 domain containing protein, expressed -
8 Sobic.010G063200 zinc finger family protein, putative, expressed -
9 Sobic.005G045200 homeobox domain containing protein, expressed -
10 Sobic.003G246200 DUF1645 domain containing protein, putative, expressed -
11 Sobic.001G525900 homeobox domain containing protein, expressed -
12 Sobic.003G397600 expressed protein -
13 Sobic.010G273700 no apical meristem protein, putative, expressed -
14 Sobic.001G102300 homeobox domain containing protein, expressed -
15 Sobic.005G119100 OsFBX70 - F-box domain containing protein, expressed -
16 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
17 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
18 Sobic.001G351100 LOL3, putative, expressed -
19 Sobic.003G339900 expressed protein -
20 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G065900 Sobic006G065900 Sobic007G025900 Sobic007G025900 Sobic006G065900--Sobic007G025900 Sobic001G351400 Sobic001G351400 Sobic006G065900--Sobic001G351400 Sobic004G251300 Sobic004G251300 Sobic006G065900--Sobic004G251300 Sobic002G201900 Sobic002G201900 Sobic006G065900--Sobic002G201900 Sobic005G072200 Sobic005G072200 Sobic006G065900--Sobic005G072200 Sobic003G002600 Sobic003G002600 Sobic006G065900--Sobic003G002600 Sobic003G359900 Sobic003G359900 Sobic006G065900--Sobic003G359900 Sobic010G063200 Sobic010G063200 Sobic006G065900--Sobic010G063200 Sobic005G045200 Sobic005G045200 Sobic006G065900--Sobic005G045200 Sobic004G099700 Sobic004G099700 Sobic007G025900--Sobic004G099700 Sobic007G025900--Sobic002G201900 Sobic007G025900--Sobic006G065900 Sobic010G273700 Sobic010G273700 Sobic007G025900--Sobic010G273700 Sobic005G119100 Sobic005G119100 Sobic007G025900--Sobic005G119100 Sobic008G060300 Sobic008G060300 Sobic007G025900--Sobic008G060300 Sobic007G025900--Sobic005G045200 Sobic003G366100 Sobic003G366100 Sobic007G025900--Sobic003G366100 Sobic001G404500 Sobic001G404500 Sobic007G025900--Sobic001G404500 Sobic006G258700 Sobic006G258700 Sobic001G351400--Sobic006G258700 Sobic009G189000 Sobic009G189000 Sobic001G351400--Sobic009G189000 Sobic001G102300 Sobic001G102300 Sobic001G351400--Sobic001G102300 Sobic002G362100 Sobic002G362100 Sobic001G351400--Sobic002G362100 Sobic010G207500 Sobic010G207500 Sobic001G351400--Sobic010G207500 Sobic001G351400--Sobic001G404500 Sobic010G184600 Sobic010G184600 Sobic001G351400--Sobic010G184600 Sobic003G410900 Sobic003G410900 Sobic001G351400--Sobic003G410900 Sobic001G525900 Sobic001G525900 Sobic001G351400--Sobic001G525900 Sobic004G251300--Sobic006G065900 Sobic001G351100 Sobic001G351100 Sobic004G251300--Sobic001G351100 Sobic004G251300--Sobic005G072200 Sobic003G397200 Sobic003G397200 Sobic004G251300--Sobic003G397200 Sobic004G251300--Sobic003G002600 Sobic004G251300--Sobic001G102300 Sobic001G212350 Sobic001G212350 Sobic004G251300--Sobic001G212350 Sobic009G195000 Sobic009G195000 Sobic004G251300--Sobic009G195000 Sobic009G008100 Sobic009G008100 Sobic004G251300--Sobic009G008100 Sobic002G200700 Sobic002G200700 Sobic002G201900--Sobic002G200700 Sobic002G201900--Sobic007G025900 Sobic006G130000 Sobic006G130000 Sobic002G201900--Sobic006G130000 Sobic003G246200 Sobic003G246200 Sobic002G201900--Sobic003G246200 Sobic002G201900--Sobic006G065900 Sobic006G064200 Sobic006G064200 Sobic002G201900--Sobic006G064200 Sobic003G397600 Sobic003G397600 Sobic002G201900--Sobic003G397600 Sobic003G224100 Sobic003G224100 Sobic002G201900--Sobic003G224100 Sobic007G141700 Sobic007G141700 Sobic002G201900--Sobic007G141700 Sobic005G072200--Sobic003G359900 Sobic006G052200 Sobic006G052200 Sobic005G072200--Sobic006G052200 Sobic002G073900 Sobic002G073900 Sobic005G072200--Sobic002G073900 Sobic010G080300 Sobic010G080300 Sobic005G072200--Sobic010G080300 Sobic009G190800 Sobic009G190800 Sobic005G072200--Sobic009G190800 Sobic005G072200--Sobic001G351100 Sobic003G402200 Sobic003G402200 Sobic005G072200--Sobic003G402200 Sobic004G096100 Sobic004G096100 Sobic005G072200--Sobic004G096100 Sobic001G314900 Sobic001G314900 Sobic005G072200--Sobic001G314900 Sobic003G162100 Sobic003G162100 Sobic003G002600--Sobic003G162100 Sobic003G403500 Sobic003G403500 Sobic003G002600--Sobic003G403500 Sobic001G236400 Sobic001G236400 Sobic003G002600--Sobic001G236400 Sobic004G131900 Sobic004G131900 Sobic003G002600--Sobic004G131900 Sobic005G012200 Sobic005G012200 Sobic003G002600--Sobic005G012200 Sobic003G002600--Sobic006G065900 Sobic003G002600--Sobic002G201900 Sobic003G002600--Sobic004G251300 Sobic001G414000 Sobic001G414000 Sobic003G002600--Sobic001G414000 Sobic003G359900--Sobic005G072200 Sobic003G359900--Sobic009G190800 Sobic004G227300 Sobic004G227300 Sobic003G359900--Sobic004G227300 Sobic001G261597 Sobic001G261597 Sobic003G359900--Sobic001G261597 Sobic009G205600 Sobic009G205600 Sobic003G359900--Sobic009G205600 Sobic004G214100 Sobic004G214100 Sobic003G359900--Sobic004G214100 Sobic003G261900 Sobic003G261900 Sobic003G359900--Sobic003G261900 Sobic003G359900--Sobic006G065900 Sobic002G271600 Sobic002G271600 Sobic003G359900--Sobic002G271600 Sobic010G063200--Sobic009G189000 Sobic009G023401 Sobic009G023401 Sobic010G063200--Sobic009G023401 Sobic004G063200 Sobic004G063200 Sobic010G063200--Sobic004G063200 Sobic010G063200--Sobic001G102300 Sobic007G014600 Sobic007G014600 Sobic010G063200--Sobic007G014600 Sobic010G063200--Sobic001G351400 Sobic010G063200--Sobic001G404500 Sobic003G108600 Sobic003G108600 Sobic010G063200--Sobic003G108600 Sobic010G063200--Sobic006G065900 Sobic003G378301 Sobic003G378301 Sobic005G045200--Sobic003G378301 Sobic004G068800 Sobic004G068800 Sobic005G045200--Sobic004G068800 Sobic006G060800 Sobic006G060800 Sobic005G045200--Sobic006G060800 Sobic010G130800 Sobic010G130800 Sobic005G045200--Sobic010G130800 Sobic004G217700 Sobic004G217700 Sobic005G045200--Sobic004G217700 Sobic005G045200--Sobic003G366100 Sobic001G145050 Sobic001G145050 Sobic005G045200--Sobic001G145050 Sobic005G045200--Sobic007G025900 Sobic005G045200--Sobic003G410900
Octagon: transcription factors


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