Gene annotation
Transcriptome id Sobic.010G063200.2,Sobic.010G063200.1
Synonym Sb10g005450
Functional annotation zinc finger family protein, putative, expressed
UniProt A0A194YHN7 , A0A194YHM1
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF118
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G15580 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os06g08250.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a049802
Brachypodium KQK19316 , KQK19315
Barley HORVU7Hr1G029720.9 , HORVU7Hr1G029720.8 , HORVU7Hr1G029720.3 , HORVU7Hr1G029720.2 , HORVU7Hr1G029720.4 , HORVU7Hr1G029720.7 , HORVU7Hr1G029720.10 , HORVU7Hr1G029720.1 , HORVU7Hr1G029720.5 , HORVU7Hr1G029720.6
Wheat TraesCS6D02G344900 , TraesCS6D02G344900 , TraesCS7A02G144900 , TraesCS7A02G144900 , TraesCS7B02G047200 , TraesCS6A02G361600 , TraesCS6A02G361600 , TraesCS7D02G146300 , TraesCSU02G147000
Populus -


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cDNA sequences
Sobic.010G063200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G189000 expressed protein -
2 Sobic.009G023401 - -
3 Sobic.004G063200 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
4 Sobic.001G102300 homeobox domain containing protein, expressed -
5 Sobic.007G014600 transferase family protein, putative, expressed -
6 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
7 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
8 Sobic.003G108600 heat shock protein DnaJ, putative, expressed -
9 Sobic.006G065900 expressed protein -
10 Sobic.010G214000 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
11 Sobic.006G060800 basic proline-rich protein, putative, expressed -
12 Sobic.003G410900 CRAL/TRIO domain containing protein, expressed -
13 Sobic.002G362100 expressed protein -
14 Sobic.008G152200 DC1 domain-containing protein, putative, expressed -
15 Sobic.004G359200 bZIP transcription factor domain containing protein, expressed -
16 Sobic.001G525900 homeobox domain containing protein, expressed -
17 Sobic.005G207000 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
18 Sobic.004G096100 expressed protein -
19 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
20 Sobic.001G300201 - -


Gene co-expression network
sample Sobic010G063200 Sobic010G063200 Sobic009G189000 Sobic009G189000 Sobic010G063200--Sobic009G189000 Sobic009G023401 Sobic009G023401 Sobic010G063200--Sobic009G023401 Sobic004G063200 Sobic004G063200 Sobic010G063200--Sobic004G063200 Sobic001G102300 Sobic001G102300 Sobic010G063200--Sobic001G102300 Sobic007G014600 Sobic007G014600 Sobic010G063200--Sobic007G014600 Sobic001G351400 Sobic001G351400 Sobic010G063200--Sobic001G351400 Sobic001G404500 Sobic001G404500 Sobic010G063200--Sobic001G404500 Sobic003G108600 Sobic003G108600 Sobic010G063200--Sobic003G108600 Sobic006G065900 Sobic006G065900 Sobic010G063200--Sobic006G065900 Sobic009G189000--Sobic004G063200 Sobic010G214000 Sobic010G214000 Sobic009G189000--Sobic010G214000 Sobic009G189000--Sobic003G108600 Sobic009G189000--Sobic001G404500 Sobic009G189000--Sobic009G023401 Sobic009G189000--Sobic001G351400 Sobic002G265400 Sobic002G265400 Sobic009G189000--Sobic002G265400 Sobic001G005500 Sobic001G005500 Sobic009G189000--Sobic001G005500 Sobic009G189000--Sobic010G063200 Sobic009G023401--Sobic009G189000 Sobic002G362100 Sobic002G362100 Sobic009G023401--Sobic002G362100 Sobic009G023401--Sobic010G063200 Sobic009G023401--Sobic001G404500 Sobic010G229450 Sobic010G229450 Sobic009G023401--Sobic010G229450 Sobic006G060800 Sobic006G060800 Sobic009G023401--Sobic006G060800 Sobic008G152200 Sobic008G152200 Sobic009G023401--Sobic008G152200 Sobic009G023401--Sobic004G063200 Sobic009G023401--Sobic001G351400 Sobic004G063200--Sobic002G265400 Sobic004G063200--Sobic001G404500 Sobic002G281000 Sobic002G281000 Sobic004G063200--Sobic002G281000 Sobic004G063200--Sobic006G060800 Sobic004G063200--Sobic009G189000 Sobic001G198700 Sobic001G198700 Sobic004G063200--Sobic001G198700 Sobic008G063100 Sobic008G063100 Sobic004G063200--Sobic008G063100 Sobic001G019300 Sobic001G019300 Sobic004G063200--Sobic001G019300 Sobic006G123500 Sobic006G123500 Sobic004G063200--Sobic006G123500 Sobic009G034600 Sobic009G034600 Sobic001G102300--Sobic009G034600 Sobic001G102300--Sobic003G108600 Sobic003G068800 Sobic003G068800 Sobic001G102300--Sobic003G068800 Sobic001G102300--Sobic010G214000 Sobic004G096100 Sobic004G096100 Sobic001G102300--Sobic004G096100 Sobic001G102300--Sobic001G351400 Sobic001G300201 Sobic001G300201 Sobic001G102300--Sobic001G300201 Sobic004G359200 Sobic004G359200 Sobic001G102300--Sobic004G359200 Sobic003G292600 Sobic003G292600 Sobic001G102300--Sobic003G292600 Sobic002G271600 Sobic002G271600 Sobic007G014600--Sobic002G271600 Sobic004G096300 Sobic004G096300 Sobic007G014600--Sobic004G096300 Sobic006G053700 Sobic006G053700 Sobic007G014600--Sobic006G053700 Sobic001G030500 Sobic001G030500 Sobic007G014600--Sobic001G030500 Sobic002G209100 Sobic002G209100 Sobic007G014600--Sobic002G209100 Sobic009G205600 Sobic009G205600 Sobic007G014600--Sobic009G205600 Sobic003G255100 Sobic003G255100 Sobic007G014600--Sobic003G255100 Sobic006G152500 Sobic006G152500 Sobic007G014600--Sobic006G152500 Sobic003G284300 Sobic003G284300 Sobic007G014600--Sobic003G284300 Sobic006G258700 Sobic006G258700 Sobic001G351400--Sobic006G258700 Sobic001G351400--Sobic009G189000 Sobic001G351400--Sobic001G102300 Sobic001G351400--Sobic002G362100 Sobic010G207500 Sobic010G207500 Sobic001G351400--Sobic010G207500 Sobic001G351400--Sobic001G404500 Sobic010G184600 Sobic010G184600 Sobic001G351400--Sobic010G184600 Sobic003G410900 Sobic003G410900 Sobic001G351400--Sobic003G410900 Sobic001G525900 Sobic001G525900 Sobic001G351400--Sobic001G525900 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic001G404500--Sobic002G281000 Sobic001G404500--Sobic008G063100 Sobic001G404500--Sobic001G525900 Sobic001G404500--Sobic003G410900 Sobic004G268500 Sobic004G268500 Sobic001G404500--Sobic004G268500 Sobic001G404500--Sobic009G189000 Sobic004G099700 Sobic004G099700 Sobic001G404500--Sobic004G099700 Sobic003G108600--Sobic010G214000 Sobic003G108600--Sobic009G189000 Sobic003G108600--Sobic003G068800 Sobic003G108600--Sobic001G102300 Sobic010G225600 Sobic010G225600 Sobic003G108600--Sobic010G225600 Sobic003G108600--Sobic006G258700 Sobic006G135100 Sobic006G135100 Sobic003G108600--Sobic006G135100 Sobic004G113800 Sobic004G113800 Sobic003G108600--Sobic004G113800 Sobic001G418700 Sobic001G418700 Sobic003G108600--Sobic001G418700 Sobic007G025900 Sobic007G025900 Sobic006G065900--Sobic007G025900 Sobic006G065900--Sobic001G351400 Sobic004G251300 Sobic004G251300 Sobic006G065900--Sobic004G251300 Sobic002G201900 Sobic002G201900 Sobic006G065900--Sobic002G201900 Sobic005G072200 Sobic005G072200 Sobic006G065900--Sobic005G072200 Sobic003G002600 Sobic003G002600 Sobic006G065900--Sobic003G002600 Sobic003G359900 Sobic003G359900 Sobic006G065900--Sobic003G359900 Sobic006G065900--Sobic010G063200 Sobic005G045200 Sobic005G045200 Sobic006G065900--Sobic005G045200
Octagon: transcription factors


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