Gene annotation
Transcriptome id Sobic.005G207000.6,Sobic.005G207000.3,Sobic.005G207000.1,Sobic.005G207000.2,Sobic.005G207000.4,Sobic.005G207000.5
Synonym CRK39
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6PTR5 , A0A1B6PTR4 , A0A1Z5RKH8 , A0A1Z5RKQ7 , A0A1B6PTS8
Pfam PF00069 PF07714
Panther DB PTHR27002 PTHR27002:SF115
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04733; interleukin-1 receptor-associated kinase 4
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G04540 : cysteine-rich RLK (RECEPTOR-like protein kinase) 36,cysteine-rich RLK (RECEPTOR-like protein kinase) 39,Leucine-rich repeat protein kinase family protein,cysteine-rich RLK (RECEPTOR-like protein kinase) 26
RAP-DB (Rice) LOC_Os12g14699.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G119100 OsFBX70 - F-box domain containing protein, expressed -
2 Sobic.009G252100 expressed protein -
3 Sobic.004G019100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K15086: (3S)-linalool synthase
4 Sobic.001G291500 - -
5 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
6 Sobic.007G037800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.007G129201 - -
8 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
9 Sobic.006G005400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -
10 Sobic.006G007100 cysteine proteinase At4g11310 precursor, putative, expressed -
11 Sobic.001G432500 expressed protein -
12 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
13 Sobic.008G060200 receptor-like protein kinase 5 precursor, putative, expressed -
14 Sobic.005G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K08249: hydroxymandelonitrile lyase
15 Sobic.009G150000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G388400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
18 Sobic.005G219100 patatin, putative, expressed -
19 Sobic.006G007600 polyphenol oxidase, putative, expressed -
20 Sobic.002G371900 DC1 domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G207000 Sobic005G207000 Sobic005G119100 Sobic005G119100 Sobic005G207000--Sobic005G119100 Sobic009G252100 Sobic009G252100 Sobic005G207000--Sobic009G252100 Sobic004G019100 Sobic004G019100 Sobic005G207000--Sobic004G019100 Sobic001G291500 Sobic001G291500 Sobic005G207000--Sobic001G291500 Sobic002G265400 Sobic002G265400 Sobic005G207000--Sobic002G265400 Sobic007G037800 Sobic007G037800 Sobic005G207000--Sobic007G037800 Sobic007G129201 Sobic007G129201 Sobic005G207000--Sobic007G129201 Sobic008G060300 Sobic008G060300 Sobic005G207000--Sobic008G060300 Sobic006G005400 Sobic006G005400 Sobic005G207000--Sobic006G005400 Sobic005G119100--Sobic005G207000 Sobic003G339900 Sobic003G339900 Sobic005G119100--Sobic003G339900 Sobic007G025900 Sobic007G025900 Sobic005G119100--Sobic007G025900 Sobic004G099700 Sobic004G099700 Sobic005G119100--Sobic004G099700 Sobic005G119100--Sobic007G129201 Sobic005G119100--Sobic008G060300 Sobic003G376200 Sobic003G376200 Sobic005G119100--Sobic003G376200 Sobic004G092000 Sobic004G092000 Sobic005G119100--Sobic004G092000 Sobic006G065900 Sobic006G065900 Sobic005G119100--Sobic006G065900 Sobic001G201800 Sobic001G201800 Sobic009G252100--Sobic001G201800 Sobic005G193600 Sobic005G193600 Sobic009G252100--Sobic005G193600 Sobic009G252100--Sobic008G060300 Sobic002G041800 Sobic002G041800 Sobic009G252100--Sobic002G041800 Sobic009G252100--Sobic007G037800 Sobic004G195800 Sobic004G195800 Sobic009G252100--Sobic004G195800 Sobic006G060800 Sobic006G060800 Sobic009G252100--Sobic006G060800 Sobic004G078600 Sobic004G078600 Sobic009G252100--Sobic004G078600 Sobic010G225500 Sobic010G225500 Sobic009G252100--Sobic010G225500 Sobic006G007100 Sobic006G007100 Sobic004G019100--Sobic006G007100 Sobic004G019100--Sobic006G005400 Sobic004G019100--Sobic001G291500 Sobic005G219100 Sobic005G219100 Sobic004G019100--Sobic005G219100 Sobic005G186500 Sobic005G186500 Sobic004G019100--Sobic005G186500 Sobic006G027500 Sobic006G027500 Sobic004G019100--Sobic006G027500 Sobic006G007600 Sobic006G007600 Sobic004G019100--Sobic006G007600 Sobic005G219000 Sobic005G219000 Sobic004G019100--Sobic005G219000 Sobic003G388400 Sobic003G388400 Sobic004G019100--Sobic003G388400 Sobic001G291500--Sobic006G007100 Sobic001G291500--Sobic005G219100 Sobic001G291500--Sobic005G219000 Sobic001G291500--Sobic006G005400 Sobic001G125700 Sobic001G125700 Sobic001G291500--Sobic001G125700 Sobic006G005500 Sobic006G005500 Sobic001G291500--Sobic006G005500 Sobic006G007300 Sobic006G007300 Sobic001G291500--Sobic006G007300 Sobic001G432500 Sobic001G432500 Sobic001G291500--Sobic001G432500 Sobic008G077800 Sobic008G077800 Sobic001G291500--Sobic008G077800 Sobic001G019300 Sobic001G019300 Sobic002G265400--Sobic001G019300 Sobic004G063200 Sobic004G063200 Sobic002G265400--Sobic004G063200 Sobic005G063900 Sobic005G063900 Sobic002G265400--Sobic005G063900 Sobic002G281000 Sobic002G281000 Sobic002G265400--Sobic002G281000 Sobic001G198700 Sobic001G198700 Sobic002G265400--Sobic001G198700 Sobic005G190900 Sobic005G190900 Sobic002G265400--Sobic005G190900 Sobic009G202400 Sobic009G202400 Sobic002G265400--Sobic009G202400 Sobic002G371900 Sobic002G371900 Sobic002G265400--Sobic002G371900 Sobic002G265400--Sobic009G252100 Sobic007G037800--Sobic009G252100 Sobic007G037800--Sobic009G202400 Sobic004G019400 Sobic004G019400 Sobic007G037800--Sobic004G019400 Sobic004G210601 Sobic004G210601 Sobic007G037800--Sobic004G210601 Sobic008G060200 Sobic008G060200 Sobic007G037800--Sobic008G060200 Sobic007G037800--Sobic008G060300 Sobic005G093300 Sobic005G093300 Sobic007G037800--Sobic005G093300 Sobic007G037800--Sobic007G129201 Sobic005G193500 Sobic005G193500 Sobic007G037800--Sobic005G193500 Sobic007G129201--Sobic008G060300 Sobic007G129201--Sobic009G252100 Sobic007G129201--Sobic005G193600 Sobic003G098700 Sobic003G098700 Sobic007G129201--Sobic003G098700 Sobic007G129201--Sobic005G193500 Sobic007G129201--Sobic007G037800 Sobic007G129201--Sobic009G202400 Sobic007G129201--Sobic006G060800 Sobic007G129201--Sobic004G019100 Sobic008G060300--Sobic006G060800 Sobic008G060300--Sobic009G252100 Sobic008G060300--Sobic005G193600 Sobic008G060300--Sobic001G201800 Sobic002G202700 Sobic002G202700 Sobic008G060300--Sobic002G202700 Sobic008G060300--Sobic007G129201 Sobic008G060300--Sobic005G193500 Sobic008G060300--Sobic004G195800 Sobic003G366100 Sobic003G366100 Sobic008G060300--Sobic003G366100 Sobic006G005400--Sobic006G007100 Sobic006G005400--Sobic005G219100 Sobic006G005400--Sobic001G125700 Sobic006G005400--Sobic005G219000 Sobic006G005400--Sobic006G005500 Sobic006G005400--Sobic006G007600 Sobic009G115400 Sobic009G115400 Sobic006G005400--Sobic009G115400 Sobic006G005400--Sobic003G388400 Sobic006G005400--Sobic001G291500
Octagon: transcription factors


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