Gene annotation
Transcriptome id Sobic.005G119100.1
Synonym PP2-B1, AtPP2-B1
Functional annotation OsFBX70 - F-box domain containing protein, expressed
UniProt A0A1B6PRX8
Pfam PF14299
Panther DB PTHR32278 PTHR32278:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02360 : phloem protein 2-B10
RAP-DB (Rice) LOC_Os02g56840.1 : OsFBX70 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU1Hr1G052750.1 , HORVU2Hr1G104500.2 , HORVU2Hr1G104500.3 , HORVU2Hr1G104500.1 , HORVU2Hr1G104500.6 , HORVU2Hr1G104500.7 , HORVU2Hr1G104500.4 , HORVU2Hr1G104500.5 , HORVU2Hr1G104500.8 , HORVU2Hr1G104500.9 , HORVU4Hr1G021480.1 , HORVU6Hr1G090010.2 , HORVU2Hr1G104500.10 , HORVU2Hr1G104500.12 , HORVU2Hr1G104500.13 , HORVU2Hr1G104500.14 , HORVU6Hr1G090000.1 , HORVU6Hr1G090000.2 , HORVU6Hr1G090000.4
Wheat TraesCSU02G197600 , TraesCS6A02G384000 , TraesCS6A02G384000 , TraesCS5D02G035000 , TraesCS5D02G035000 , TraesCS6B02G423200 , TraesCS6B02G423400 , TraesCSU02G190600 , TraesCS6D02G368900 , TraesCS6A02G383900 , TraesCS6D02G369000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G207000 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
2 Sobic.003G339900 expressed protein -
3 Sobic.007G025900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
4 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -
5 Sobic.007G129201 - -
6 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
7 Sobic.003G376200 expressed protein -
8 Sobic.004G092000 expressed protein -
9 Sobic.006G065900 expressed protein -
10 Sobic.009G150000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.005G072200 lipase, putative, expressed -
12 Sobic.006G279400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
13 Sobic.002G073900 expressed protein -
14 Sobic.004G019100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K15086: (3S)-linalool synthase
15 Sobic.005G012200 STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
16 Sobic.002G322800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
17 Sobic.009G252100 expressed protein -
18 Sobic.002G201900 transporter family protein, putative, expressed -
19 Sobic.001G351100 LOL3, putative, expressed -
20 Sobic.010G171900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase (Os)(PubMedID : 27208977)@L-ascorbate oxidase precursor, putative, expressed -


Gene co-expression network
sample Sobic005G119100 Sobic005G119100 Sobic005G207000 Sobic005G207000 Sobic005G119100--Sobic005G207000 Sobic003G339900 Sobic003G339900 Sobic005G119100--Sobic003G339900 Sobic007G025900 Sobic007G025900 Sobic005G119100--Sobic007G025900 Sobic004G099700 Sobic004G099700 Sobic005G119100--Sobic004G099700 Sobic007G129201 Sobic007G129201 Sobic005G119100--Sobic007G129201 Sobic008G060300 Sobic008G060300 Sobic005G119100--Sobic008G060300 Sobic003G376200 Sobic003G376200 Sobic005G119100--Sobic003G376200 Sobic004G092000 Sobic004G092000 Sobic005G119100--Sobic004G092000 Sobic006G065900 Sobic006G065900 Sobic005G119100--Sobic006G065900 Sobic005G207000--Sobic005G119100 Sobic009G252100 Sobic009G252100 Sobic005G207000--Sobic009G252100 Sobic004G019100 Sobic004G019100 Sobic005G207000--Sobic004G019100 Sobic001G291500 Sobic001G291500 Sobic005G207000--Sobic001G291500 Sobic002G265400 Sobic002G265400 Sobic005G207000--Sobic002G265400 Sobic007G037800 Sobic007G037800 Sobic005G207000--Sobic007G037800 Sobic005G207000--Sobic007G129201 Sobic005G207000--Sobic008G060300 Sobic006G005400 Sobic006G005400 Sobic005G207000--Sobic006G005400 Sobic003G339900--Sobic005G119100 Sobic003G339900--Sobic004G092000 Sobic003G339900--Sobic007G025900 Sobic002G257100 Sobic002G257100 Sobic003G339900--Sobic002G257100 Sobic001G339600 Sobic001G339600 Sobic003G339900--Sobic001G339600 Sobic001G314300 Sobic001G314300 Sobic003G339900--Sobic001G314300 Sobic008G142100 Sobic008G142100 Sobic003G339900--Sobic008G142100 Sobic005G072200 Sobic005G072200 Sobic003G339900--Sobic005G072200 Sobic010G273700 Sobic010G273700 Sobic003G339900--Sobic010G273700 Sobic007G025900--Sobic004G099700 Sobic002G201900 Sobic002G201900 Sobic007G025900--Sobic002G201900 Sobic007G025900--Sobic006G065900 Sobic007G025900--Sobic010G273700 Sobic007G025900--Sobic005G119100 Sobic007G025900--Sobic008G060300 Sobic005G045200 Sobic005G045200 Sobic007G025900--Sobic005G045200 Sobic003G366100 Sobic003G366100 Sobic007G025900--Sobic003G366100 Sobic001G404500 Sobic001G404500 Sobic007G025900--Sobic001G404500 Sobic006G123500 Sobic006G123500 Sobic004G099700--Sobic006G123500 Sobic004G099700--Sobic001G404500 Sobic004G099700--Sobic007G025900 Sobic004G099700--Sobic008G060300 Sobic004G063200 Sobic004G063200 Sobic004G099700--Sobic004G063200 Sobic003G410900 Sobic003G410900 Sobic004G099700--Sobic003G410900 Sobic008G065200 Sobic008G065200 Sobic004G099700--Sobic008G065200 Sobic006G164300 Sobic006G164300 Sobic004G099700--Sobic006G164300 Sobic010G193000 Sobic010G193000 Sobic004G099700--Sobic010G193000 Sobic007G129201--Sobic008G060300 Sobic007G129201--Sobic009G252100 Sobic005G193600 Sobic005G193600 Sobic007G129201--Sobic005G193600 Sobic003G098700 Sobic003G098700 Sobic007G129201--Sobic003G098700 Sobic005G193500 Sobic005G193500 Sobic007G129201--Sobic005G193500 Sobic007G129201--Sobic007G037800 Sobic009G202400 Sobic009G202400 Sobic007G129201--Sobic009G202400 Sobic006G060800 Sobic006G060800 Sobic007G129201--Sobic006G060800 Sobic007G129201--Sobic004G019100 Sobic008G060300--Sobic006G060800 Sobic008G060300--Sobic009G252100 Sobic008G060300--Sobic005G193600 Sobic001G201800 Sobic001G201800 Sobic008G060300--Sobic001G201800 Sobic002G202700 Sobic002G202700 Sobic008G060300--Sobic002G202700 Sobic008G060300--Sobic007G129201 Sobic008G060300--Sobic005G193500 Sobic004G195800 Sobic004G195800 Sobic008G060300--Sobic004G195800 Sobic008G060300--Sobic003G366100 Sobic004G220600 Sobic004G220600 Sobic003G376200--Sobic004G220600 Sobic002G216500 Sobic002G216500 Sobic003G376200--Sobic002G216500 Sobic003G376200--Sobic004G092000 Sobic003G291700 Sobic003G291700 Sobic003G376200--Sobic003G291700 Sobic005G218500 Sobic005G218500 Sobic003G376200--Sobic005G218500 Sobic002G209100 Sobic002G209100 Sobic003G376200--Sobic002G209100 Sobic003G376200--Sobic010G273700 Sobic003G376200--Sobic008G060300 Sobic002G195800 Sobic002G195800 Sobic003G376200--Sobic002G195800 Sobic004G092000--Sobic003G376200 Sobic004G092000--Sobic003G339900 Sobic004G092000--Sobic001G339600 Sobic004G092000--Sobic001G314300 Sobic002G073900 Sobic002G073900 Sobic004G092000--Sobic002G073900 Sobic003G138400 Sobic003G138400 Sobic004G092000--Sobic003G138400 Sobic009G227800 Sobic009G227800 Sobic004G092000--Sobic009G227800 Sobic002G160600 Sobic002G160600 Sobic004G092000--Sobic002G160600 Sobic010G089700 Sobic010G089700 Sobic004G092000--Sobic010G089700 Sobic006G065900--Sobic007G025900 Sobic001G351400 Sobic001G351400 Sobic006G065900--Sobic001G351400 Sobic004G251300 Sobic004G251300 Sobic006G065900--Sobic004G251300 Sobic006G065900--Sobic002G201900 Sobic006G065900--Sobic005G072200 Sobic003G002600 Sobic003G002600 Sobic006G065900--Sobic003G002600 Sobic003G359900 Sobic003G359900 Sobic006G065900--Sobic003G359900 Sobic010G063200 Sobic010G063200 Sobic006G065900--Sobic010G063200 Sobic006G065900--Sobic005G045200
Octagon: transcription factors


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