Gene annotation
Transcriptome id Sobic.004G092000.1
Synonym Sb04g007530
Functional annotation expressed protein
UniProt A0A1Z5RME4
Pfam -
Panther DB PTHR33120
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g38210.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G092000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G376200 expressed protein -
2 Sobic.003G339900 expressed protein -
3 Sobic.001G339600 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
4 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
5 Sobic.002G073900 expressed protein -
6 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
7 Sobic.009G227800 membrane attack complex component/perforin/complement C9, putative, expressed -
8 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
9 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
10 Sobic.003G423200 NAM, putative, expressed -
11 Sobic.005G090600 peptide transporter PTR2, putative, expressed -
12 Sobic.005G119100 OsFBX70 - F-box domain containing protein, expressed -
13 Sobic.003G109832 - -
14 Sobic.010G273700 no apical meristem protein, putative, expressed -
15 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.004G220600 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
17 Sobic.004G340800 OsFBX70 - F-box domain containing protein, expressed -
18 Sobic.007G025900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
19 Sobic.001G095750 - -
20 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -


Gene co-expression network
sample Sobic004G092000 Sobic004G092000 Sobic003G376200 Sobic003G376200 Sobic004G092000--Sobic003G376200 Sobic003G339900 Sobic003G339900 Sobic004G092000--Sobic003G339900 Sobic001G339600 Sobic001G339600 Sobic004G092000--Sobic001G339600 Sobic001G314300 Sobic001G314300 Sobic004G092000--Sobic001G314300 Sobic002G073900 Sobic002G073900 Sobic004G092000--Sobic002G073900 Sobic003G138400 Sobic003G138400 Sobic004G092000--Sobic003G138400 Sobic009G227800 Sobic009G227800 Sobic004G092000--Sobic009G227800 Sobic002G160600 Sobic002G160600 Sobic004G092000--Sobic002G160600 Sobic010G089700 Sobic010G089700 Sobic004G092000--Sobic010G089700 Sobic004G220600 Sobic004G220600 Sobic003G376200--Sobic004G220600 Sobic002G216500 Sobic002G216500 Sobic003G376200--Sobic002G216500 Sobic003G376200--Sobic004G092000 Sobic003G291700 Sobic003G291700 Sobic003G376200--Sobic003G291700 Sobic005G218500 Sobic005G218500 Sobic003G376200--Sobic005G218500 Sobic002G209100 Sobic002G209100 Sobic003G376200--Sobic002G209100 Sobic010G273700 Sobic010G273700 Sobic003G376200--Sobic010G273700 Sobic008G060300 Sobic008G060300 Sobic003G376200--Sobic008G060300 Sobic002G195800 Sobic002G195800 Sobic003G376200--Sobic002G195800 Sobic005G119100 Sobic005G119100 Sobic003G339900--Sobic005G119100 Sobic003G339900--Sobic004G092000 Sobic007G025900 Sobic007G025900 Sobic003G339900--Sobic007G025900 Sobic002G257100 Sobic002G257100 Sobic003G339900--Sobic002G257100 Sobic003G339900--Sobic001G339600 Sobic003G339900--Sobic001G314300 Sobic008G142100 Sobic008G142100 Sobic003G339900--Sobic008G142100 Sobic005G072200 Sobic005G072200 Sobic003G339900--Sobic005G072200 Sobic003G339900--Sobic010G273700 Sobic001G339600--Sobic004G092000 Sobic001G339600--Sobic003G138400 Sobic010G214200 Sobic010G214200 Sobic001G339600--Sobic010G214200 Sobic001G339600--Sobic003G339900 Sobic001G339600--Sobic008G142100 Sobic001G339600--Sobic002G216500 Sobic001G339600--Sobic004G220600 Sobic001G387000 Sobic001G387000 Sobic001G339600--Sobic001G387000 Sobic001G319100 Sobic001G319100 Sobic001G339600--Sobic001G319100 Sobic006G114200 Sobic006G114200 Sobic001G314300--Sobic006G114200 Sobic001G095750 Sobic001G095750 Sobic001G314300--Sobic001G095750 Sobic003G109832 Sobic003G109832 Sobic001G314300--Sobic003G109832 Sobic001G314300--Sobic009G227800 Sobic001G314700 Sobic001G314700 Sobic001G314300--Sobic001G314700 Sobic001G314300--Sobic004G092000 Sobic001G314300--Sobic010G273700 Sobic002G185200 Sobic002G185200 Sobic001G314300--Sobic002G185200 Sobic001G314300--Sobic003G339900 Sobic003G308700 Sobic003G308700 Sobic002G073900--Sobic003G308700 Sobic002G073900--Sobic005G072200 Sobic006G042200 Sobic006G042200 Sobic002G073900--Sobic006G042200 Sobic007G054100 Sobic007G054100 Sobic002G073900--Sobic007G054100 Sobic001G261597 Sobic001G261597 Sobic002G073900--Sobic001G261597 Sobic002G073900--Sobic004G092000 Sobic009G008100 Sobic009G008100 Sobic002G073900--Sobic009G008100 Sobic004G227300 Sobic004G227300 Sobic002G073900--Sobic004G227300 Sobic010G009400 Sobic010G009400 Sobic002G073900--Sobic010G009400 Sobic003G138400--Sobic010G273700 Sobic003G138400--Sobic004G220600 Sobic004G006500 Sobic004G006500 Sobic003G138400--Sobic004G006500 Sobic003G138400--Sobic001G339600 Sobic003G138400--Sobic009G227800 Sobic004G169900 Sobic004G169900 Sobic003G138400--Sobic004G169900 Sobic003G138400--Sobic004G092000 Sobic003G138400--Sobic002G216500 Sobic009G010400 Sobic009G010400 Sobic003G138400--Sobic009G010400 Sobic009G227800--Sobic010G273700 Sobic009G227800--Sobic003G109832 Sobic009G227800--Sobic001G314300 Sobic009G227800--Sobic003G138400 Sobic009G227800--Sobic004G092000 Sobic009G227800--Sobic003G376200 Sobic009G227800--Sobic004G006500 Sobic009G227800--Sobic002G195800 Sobic009G227800--Sobic001G339600 Sobic007G064800 Sobic007G064800 Sobic002G160600--Sobic007G064800 Sobic006G014700 Sobic006G014700 Sobic002G160600--Sobic006G014700 Sobic002G160600--Sobic005G218500 Sobic002G160600--Sobic002G216500 Sobic001G314800 Sobic001G314800 Sobic002G160600--Sobic001G314800 Sobic008G075400 Sobic008G075400 Sobic002G160600--Sobic008G075400 Sobic004G140000 Sobic004G140000 Sobic002G160600--Sobic004G140000 Sobic006G265000 Sobic006G265000 Sobic002G160600--Sobic006G265000 Sobic007G183100 Sobic007G183100 Sobic002G160600--Sobic007G183100 Sobic009G028500 Sobic009G028500 Sobic010G089700--Sobic009G028500 Sobic004G281300 Sobic004G281300 Sobic010G089700--Sobic004G281300 Sobic010G089700--Sobic004G006500 Sobic010G089700--Sobic004G092000 Sobic009G032400 Sobic009G032400 Sobic010G089700--Sobic009G032400 Sobic002G137800 Sobic002G137800 Sobic010G089700--Sobic002G137800 Sobic002G418900 Sobic002G418900 Sobic010G089700--Sobic002G418900 Sobic010G089700--Sobic001G095750 Sobic007G124100 Sobic007G124100 Sobic010G089700--Sobic007G124100
Octagon: transcription factors


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