Gene annotation
Transcriptome id Sobic.010G089700.1,Sobic.010G089700.2
Synonym Sb10g007780, SbERF103, RAP2.4,ethylene response factor 103
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Not investigated (PubMedID : 23766026)
ethylene-responsive transcription factor, putative, expressed
UniProt C5Z6Z4
Pfam PF00847
Panther DB PTHR31657 PTHR31657:SF6
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G78080 : related to AP2 4
RAP-DB (Rice) LOC_Os06g11860.1 : ethylene-responsive transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a004010 , Zm00025a046712 , Zm00025a044642 , Zm00025a022123 , Zm00025a033171 , Zm00025a049497
Brachypodium KQJ90021 , KQK17300 , KQK01869 , KQK18916 , KQJ98221 , PNT67305 , KQJ83714
Barley HORVU6Hr1G060220.6 , HORVU6Hr1G060220.7 , HORVU6Hr1G060220.4 , HORVU6Hr1G060220.5 , HORVU6Hr1G060220.3 , HORVU6Hr1G060220.2 , HORVU6Hr1G060220.1 , HORVU7Hr1G037180.2 , HORVU7Hr1G037180.3 , HORVU7Hr1G037180.1 , HORVU6Hr1G074970.3 , HORVU6Hr1G074970.2 , HORVU6Hr1G074970.1 , HORVU6Hr1G074970.4 , HORVU5Hr1G058270.1 , HORVU5Hr1G058270.2 , HORVU5Hr1G058270.5 , HORVU5Hr1G058270.4 , HORVU5Hr1G058270.6
Wheat TraesCS5D02G200900 , TraesCS5B02G193200
Populus -


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cDNA sequences
Sobic.010G089700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G028500 zinc finger family protein, putative, expressed -
2 Sobic.004G281300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
3 Sobic.004G006500 expressed protein -
4 Sobic.004G092000 expressed protein -
5 Sobic.009G032400 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
6 Sobic.002G137800 gibberellin 20 oxidase 2, putative, expressed -
7 Sobic.002G418900 expressed protein -
8 Sobic.001G095750 - -
9 Sobic.007G124100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
10 Sobic.007G196400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
11 Sobic.001G131200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@PB1 domain containing protein, expressed -
12 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
13 Sobic.002G301800 GRAS family transcription factor domain containing protein, expressed -
14 Sobic.003G422700 amino acid permease family protein, putative, expressed -
15 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
16 Sobic.001G236400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.008G187800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GCRP4 - Glycine and cysteine rich family protein precursor, expressed -
18 Sobic.004G028600 receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
20 Sobic.001G450500 STE_MEK_ste7_MAP2K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -


Gene co-expression network
sample Sobic010G089700 Sobic010G089700 Sobic009G028500 Sobic009G028500 Sobic010G089700--Sobic009G028500 Sobic004G281300 Sobic004G281300 Sobic010G089700--Sobic004G281300 Sobic004G006500 Sobic004G006500 Sobic010G089700--Sobic004G006500 Sobic004G092000 Sobic004G092000 Sobic010G089700--Sobic004G092000 Sobic009G032400 Sobic009G032400 Sobic010G089700--Sobic009G032400 Sobic002G137800 Sobic002G137800 Sobic010G089700--Sobic002G137800 Sobic002G418900 Sobic002G418900 Sobic010G089700--Sobic002G418900 Sobic001G095750 Sobic001G095750 Sobic010G089700--Sobic001G095750 Sobic007G124100 Sobic007G124100 Sobic010G089700--Sobic007G124100 Sobic004G065900 Sobic004G065900 Sobic009G028500--Sobic004G065900 Sobic009G028500--Sobic004G006500 Sobic009G028500--Sobic010G089700 Sobic009G028500--Sobic002G418900 Sobic002G207300 Sobic002G207300 Sobic009G028500--Sobic002G207300 Sobic002G367900 Sobic002G367900 Sobic009G028500--Sobic002G367900 Sobic001G118900 Sobic001G118900 Sobic009G028500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic009G028500--Sobic009G010400 Sobic002G185200 Sobic002G185200 Sobic009G028500--Sobic002G185200 Sobic004G281300--Sobic010G089700 Sobic006G042200 Sobic006G042200 Sobic004G281300--Sobic006G042200 Sobic004G281300--Sobic009G028500 Sobic002G301800 Sobic002G301800 Sobic004G281300--Sobic002G301800 Sobic003G403500 Sobic003G403500 Sobic004G281300--Sobic003G403500 Sobic003G422700 Sobic003G422700 Sobic004G281300--Sobic003G422700 Sobic001G034300 Sobic001G034300 Sobic004G281300--Sobic001G034300 Sobic004G337500 Sobic004G337500 Sobic004G281300--Sobic004G337500 Sobic001G351100 Sobic001G351100 Sobic004G281300--Sobic001G351100 Sobic004G006500--Sobic002G185200 Sobic004G006500--Sobic002G418900 Sobic004G006500--Sobic001G118900 Sobic004G006500--Sobic009G010400 Sobic004G006500--Sobic009G028500 Sobic004G006500--Sobic004G065900 Sobic002G195800 Sobic002G195800 Sobic004G006500--Sobic002G195800 Sobic006G114200 Sobic006G114200 Sobic004G006500--Sobic006G114200 Sobic004G086800 Sobic004G086800 Sobic004G006500--Sobic004G086800 Sobic003G376200 Sobic003G376200 Sobic004G092000--Sobic003G376200 Sobic003G339900 Sobic003G339900 Sobic004G092000--Sobic003G339900 Sobic001G339600 Sobic001G339600 Sobic004G092000--Sobic001G339600 Sobic001G314300 Sobic001G314300 Sobic004G092000--Sobic001G314300 Sobic002G073900 Sobic002G073900 Sobic004G092000--Sobic002G073900 Sobic003G138400 Sobic003G138400 Sobic004G092000--Sobic003G138400 Sobic009G227800 Sobic009G227800 Sobic004G092000--Sobic009G227800 Sobic002G160600 Sobic002G160600 Sobic004G092000--Sobic002G160600 Sobic004G092000--Sobic010G089700 Sobic003G413500 Sobic003G413500 Sobic009G032400--Sobic003G413500 Sobic001G387600 Sobic001G387600 Sobic009G032400--Sobic001G387600 Sobic002G431600 Sobic002G431600 Sobic009G032400--Sobic002G431600 Sobic003G076500 Sobic003G076500 Sobic009G032400--Sobic003G076500 Sobic009G032400--Sobic001G351100 Sobic009G032400--Sobic002G073900 Sobic009G032400--Sobic010G089700 Sobic010G009400 Sobic010G009400 Sobic009G032400--Sobic010G009400 Sobic009G138200 Sobic009G138200 Sobic009G032400--Sobic009G138200 Sobic002G137800--Sobic001G095750 Sobic002G137800--Sobic001G118900 Sobic004G340800 Sobic004G340800 Sobic002G137800--Sobic004G340800 Sobic002G137800--Sobic001G351100 Sobic006G205200 Sobic006G205200 Sobic002G137800--Sobic006G205200 Sobic001G161200 Sobic001G161200 Sobic002G137800--Sobic001G161200 Sobic003G109832 Sobic003G109832 Sobic002G137800--Sobic003G109832 Sobic002G137800--Sobic003G138400 Sobic002G137800--Sobic009G028500 Sobic002G418900--Sobic004G006500 Sobic002G418900--Sobic002G185200 Sobic002G418900--Sobic001G118900 Sobic002G418900--Sobic004G065900 Sobic002G418900--Sobic009G028500 Sobic002G418900--Sobic002G367900 Sobic002G418900--Sobic002G207300 Sobic007G143400 Sobic007G143400 Sobic002G418900--Sobic007G143400 Sobic001G131200 Sobic001G131200 Sobic002G418900--Sobic001G131200 Sobic001G095750--Sobic001G118900 Sobic003G131500 Sobic003G131500 Sobic001G095750--Sobic003G131500 Sobic002G189000 Sobic002G189000 Sobic001G095750--Sobic002G189000 Sobic001G095750--Sobic001G314300 Sobic001G095750--Sobic002G137800 Sobic001G095750--Sobic006G114200 Sobic003G234800 Sobic003G234800 Sobic001G095750--Sobic003G234800 Sobic005G087800 Sobic005G087800 Sobic001G095750--Sobic005G087800 Sobic001G095750--Sobic001G161200 Sobic007G124100--Sobic002G207300 Sobic007G139900 Sobic007G139900 Sobic007G124100--Sobic007G139900 Sobic007G124100--Sobic001G118900 Sobic007G124100--Sobic002G367900 Sobic007G124100--Sobic001G161200 Sobic007G124100--Sobic004G065900 Sobic007G124100--Sobic009G028500 Sobic004G176900 Sobic004G176900 Sobic007G124100--Sobic004G176900 Sobic007G124100--Sobic003G131500
Octagon: transcription factors


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