Gene annotation
Transcriptome id Sobic.003G422700.2,Sobic.003G422700.3
Synonym BAT1
Functional annotation amino acid permease family protein, putative, expressed
UniProt A0A1W0W1B0 , A0A1W0W1C2
Pfam PF00324
Panther DB PTHR11785 PTHR11785:SF356
NCBI CDD KOG1289; Amino acid transporters
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT2G01170 : bidirectional amino acid transporter 1
RAP-DB (Rice) LOC_Os01g71740.1 : amino acid permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029022 , Zm00025a026049 , Zm00025a026047 , Zm00025a038470 , Zm00025a028664
Brachypodium KQK11517 , KQK11518 , KQK03895 , KQK08652 , KQK08653 , PNT73590 , PNT72362 , PNT72363 , PNT72361
Barley HORVU3Hr1G105890.2 , HORVU3Hr1G105890.1 , HORVU3Hr1G053090.18 , HORVU3Hr1G053090.14 , HORVU3Hr1G053090.15 , HORVU3Hr1G053090.16 , HORVU3Hr1G053090.17 , HORVU3Hr1G053090.10 , HORVU3Hr1G053090.11 , HORVU3Hr1G053090.12 , HORVU3Hr1G053090.13 , HORVU3Hr1G105870.3 , HORVU3Hr1G105870.8 , HORVU3Hr1G105870.9 , HORVU3Hr1G105870.4 , HORVU3Hr1G105870.5 , HORVU3Hr1G105870.6 , HORVU3Hr1G105870.7 , HORVU3Hr1G105870.1 , HORVU3Hr1G105870.2 , HORVU3Hr1G105920.11 , HORVU3Hr1G105870.14 , HORVU3Hr1G105870.15 , HORVU3Hr1G105870.12 , HORVU3Hr1G105870.13 , HORVU3Hr1G105870.10 , HORVU3Hr1G105870.11 , HORVU3Hr1G105920.6 , HORVU3Hr1G105920.7 , HORVU3Hr1G105920.4 , HORVU3Hr1G105920.3 , HORVU3Hr1G105920.1 , HORVU3Hr1G105920.8 , HORVU3Hr1G105920.9 , HORVU3Hr1G053090.4 , HORVU3Hr1G053090.5 , HORVU3Hr1G053090.1 , HORVU3Hr1G053090.8 , HORVU3Hr1G053090.9
Wheat TraesCS3D02G480000 , TraesCS3B02G532100 , TraesCS3A02G484600 , TraesCS3B02G531900 , TraesCS3D02G219100 , TraesCS3D02G219100 , TraesCS3A02G484700 , TraesCS3B02G111600 , TraesCS3A02G484900 , TraesCSU02G049700 , TraesCS3B02G247500 , TraesCS3B02G247500 , TraesCS3B02G531700 , TraesCS3A02G217200 , TraesCS3A02G217200 , TraesCS3D02G096500 , TraesCS3B02G532305 , TraesCS3D02G479800 , TraesCS3A02G096000 , TraesCS3D02G480100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G351100 LOL3, putative, expressed -
2 Sobic.009G028500 zinc finger family protein, putative, expressed -
3 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
4 Sobic.006G042200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
5 Sobic.004G281300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
6 Sobic.003G424400 Spotted leaf protein(PubMedID : 24906815)@armadillo repeat-containing protein, putative, expressed K08332: vacuolar protein 8
7 Sobic.001G034300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
8 Sobic.009G195300 DUF803 domain containing, putative, expressed -
9 Sobic.008G125600 - -
10 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
11 Sobic.004G267300 bg55, putative, expressed -
12 Sobic.002G417500 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
13 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
14 Sobic.003G272400 DUF292 domain containing protein, expressed -
15 Sobic.009G008100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
16 Sobic.006G025300 white-brown complex homolog protein, putative, expressed -
17 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
18 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.007G080900 MBTB23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.007G134600 agenet domain containing protein, expressed -


Gene co-expression network
sample Sobic003G422700 Sobic003G422700 Sobic001G351100 Sobic001G351100 Sobic003G422700--Sobic001G351100 Sobic009G028500 Sobic009G028500 Sobic003G422700--Sobic009G028500 Sobic003G403500 Sobic003G403500 Sobic003G422700--Sobic003G403500 Sobic006G042200 Sobic006G042200 Sobic003G422700--Sobic006G042200 Sobic004G281300 Sobic004G281300 Sobic003G422700--Sobic004G281300 Sobic003G424400 Sobic003G424400 Sobic003G422700--Sobic003G424400 Sobic001G034300 Sobic001G034300 Sobic003G422700--Sobic001G034300 Sobic009G195300 Sobic009G195300 Sobic003G422700--Sobic009G195300 Sobic008G125600 Sobic008G125600 Sobic003G422700--Sobic008G125600 Sobic005G072200 Sobic005G072200 Sobic001G351100--Sobic005G072200 Sobic001G351100--Sobic003G422700 Sobic001G351100--Sobic006G042200 Sobic004G251300 Sobic004G251300 Sobic001G351100--Sobic004G251300 Sobic004G340800 Sobic004G340800 Sobic001G351100--Sobic004G340800 Sobic002G137800 Sobic002G137800 Sobic001G351100--Sobic002G137800 Sobic002G073900 Sobic002G073900 Sobic001G351100--Sobic002G073900 Sobic001G351100--Sobic003G403500 Sobic007G054100 Sobic007G054100 Sobic001G351100--Sobic007G054100 Sobic004G065900 Sobic004G065900 Sobic009G028500--Sobic004G065900 Sobic004G006500 Sobic004G006500 Sobic009G028500--Sobic004G006500 Sobic010G089700 Sobic010G089700 Sobic009G028500--Sobic010G089700 Sobic002G418900 Sobic002G418900 Sobic009G028500--Sobic002G418900 Sobic002G207300 Sobic002G207300 Sobic009G028500--Sobic002G207300 Sobic002G367900 Sobic002G367900 Sobic009G028500--Sobic002G367900 Sobic001G118900 Sobic001G118900 Sobic009G028500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic009G028500--Sobic009G010400 Sobic002G185200 Sobic002G185200 Sobic009G028500--Sobic002G185200 Sobic002G001000 Sobic002G001000 Sobic003G403500--Sobic002G001000 Sobic001G500800 Sobic001G500800 Sobic003G403500--Sobic001G500800 Sobic003G375900 Sobic003G375900 Sobic003G403500--Sobic003G375900 Sobic002G367100 Sobic002G367100 Sobic003G403500--Sobic002G367100 Sobic003G002600 Sobic003G002600 Sobic003G403500--Sobic003G002600 Sobic004G201700 Sobic004G201700 Sobic003G403500--Sobic004G201700 Sobic004G131900 Sobic004G131900 Sobic003G403500--Sobic004G131900 Sobic002G200700 Sobic002G200700 Sobic003G403500--Sobic002G200700 Sobic003G403500--Sobic004G340800 Sobic004G135300 Sobic004G135300 Sobic006G042200--Sobic004G135300 Sobic006G042200--Sobic007G054100 Sobic001G222250 Sobic001G222250 Sobic006G042200--Sobic001G222250 Sobic004G174900 Sobic004G174900 Sobic006G042200--Sobic004G174900 Sobic006G042200--Sobic008G125600 Sobic004G010101 Sobic004G010101 Sobic006G042200--Sobic004G010101 Sobic009G008100 Sobic009G008100 Sobic006G042200--Sobic009G008100 Sobic006G042200--Sobic002G073900 Sobic002G040800 Sobic002G040800 Sobic006G042200--Sobic002G040800 Sobic004G281300--Sobic010G089700 Sobic004G281300--Sobic006G042200 Sobic004G281300--Sobic009G028500 Sobic002G301800 Sobic002G301800 Sobic004G281300--Sobic002G301800 Sobic004G281300--Sobic003G403500 Sobic004G281300--Sobic003G422700 Sobic004G281300--Sobic001G034300 Sobic004G337500 Sobic004G337500 Sobic004G281300--Sobic004G337500 Sobic004G281300--Sobic001G351100 Sobic003G119800 Sobic003G119800 Sobic003G424400--Sobic003G119800 Sobic009G230700 Sobic009G230700 Sobic003G424400--Sobic009G230700 Sobic001G420700 Sobic001G420700 Sobic003G424400--Sobic001G420700 Sobic003G424400--Sobic009G195300 Sobic009G134600 Sobic009G134600 Sobic003G424400--Sobic009G134600 Sobic008G189400 Sobic008G189400 Sobic003G424400--Sobic008G189400 Sobic007G136700 Sobic007G136700 Sobic003G424400--Sobic007G136700 Sobic006G025300 Sobic006G025300 Sobic003G424400--Sobic006G025300 Sobic007G178200 Sobic007G178200 Sobic003G424400--Sobic007G178200 Sobic001G251200 Sobic001G251200 Sobic001G034300--Sobic001G251200 Sobic004G004200 Sobic004G004200 Sobic001G034300--Sobic004G004200 Sobic002G119700 Sobic002G119700 Sobic001G034300--Sobic002G119700 Sobic009G138200 Sobic009G138200 Sobic001G034300--Sobic009G138200 Sobic003G126300 Sobic003G126300 Sobic001G034300--Sobic003G126300 Sobic001G312900 Sobic001G312900 Sobic001G034300--Sobic001G312900 Sobic004G004300 Sobic004G004300 Sobic001G034300--Sobic004G004300 Sobic003G036800 Sobic003G036800 Sobic001G034300--Sobic003G036800 Sobic002G134600 Sobic002G134600 Sobic001G034300--Sobic002G134600 Sobic009G195300--Sobic003G119800 Sobic004G347900 Sobic004G347900 Sobic009G195300--Sobic004G347900 Sobic009G195300--Sobic008G189400 Sobic009G195300--Sobic003G424400 Sobic009G195300--Sobic006G025300 Sobic007G006900 Sobic007G006900 Sobic009G195300--Sobic007G006900 Sobic009G195300--Sobic002G134600 Sobic003G361500 Sobic003G361500 Sobic009G195300--Sobic003G361500 Sobic008G139700 Sobic008G139700 Sobic009G195300--Sobic008G139700 Sobic008G125501 Sobic008G125501 Sobic008G125600--Sobic008G125501 Sobic008G000900 Sobic008G000900 Sobic008G125600--Sobic008G000900 Sobic003G159450 Sobic003G159450 Sobic008G125600--Sobic003G159450 Sobic001G111900 Sobic001G111900 Sobic008G125600--Sobic001G111900 Sobic003G088700 Sobic003G088700 Sobic008G125600--Sobic003G088700 Sobic007G112900 Sobic007G112900 Sobic008G125600--Sobic007G112900 Sobic004G062800 Sobic004G062800 Sobic008G125600--Sobic004G062800 Sobic010G056000 Sobic010G056000 Sobic008G125600--Sobic010G056000 Sobic001G454401 Sobic001G454401 Sobic008G125600--Sobic001G454401
Octagon: transcription factors


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