Gene annotation
Transcriptome id Sobic.007G080900.1
Synonym BPM2, ATBPM2, Sb07g006500
Functional annotation MBTB23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt A0A1B6PGK7
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF154
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G06190 : BTB-POZ and MATH domain 2
RAP-DB (Rice) LOC_Os08g13070.1 : MBTB23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G081000 - -
2 Sobic.003G422700 amino acid permease family protein, putative, expressed -
3 Sobic.008G094300 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
4 Sobic.006G106700 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
5 Sobic.010G197700 cytochrome P450, putative, expressed -
6 Sobic.010G054500 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
7 Sobic.010G133200 - -
8 Sobic.003G138550 - -
9 Sobic.007G124100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
10 Sobic.008G052500 receptor-like kinase, putative, expressed -
11 Sobic.008G161700 homocysteine S-methyltransferase protein, putative, expressed K00547: mmuM, homocysteine S-methyltransferase
12 Sobic.004G326900 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
13 Sobic.003G006800 expressed protein -
14 Sobic.001G210250 - -
15 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
16 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
17 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
18 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
19 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -
20 Sobic.001G210200 RIPER9 - Ripening-related family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic007G080900 Sobic007G080900 Sobic007G081000 Sobic007G081000 Sobic007G080900--Sobic007G081000 Sobic003G422700 Sobic003G422700 Sobic007G080900--Sobic003G422700 Sobic008G094300 Sobic008G094300 Sobic007G080900--Sobic008G094300 Sobic006G106700 Sobic006G106700 Sobic007G080900--Sobic006G106700 Sobic010G197700 Sobic010G197700 Sobic007G080900--Sobic010G197700 Sobic010G054500 Sobic010G054500 Sobic007G080900--Sobic010G054500 Sobic010G133200 Sobic010G133200 Sobic007G080900--Sobic010G133200 Sobic003G138550 Sobic003G138550 Sobic007G080900--Sobic003G138550 Sobic007G124100 Sobic007G124100 Sobic007G080900--Sobic007G124100 Sobic001G066600 Sobic001G066600 Sobic007G081000--Sobic001G066600 Sobic007G081000--Sobic003G138550 Sobic003G163700 Sobic003G163700 Sobic007G081000--Sobic003G163700 Sobic008G117300 Sobic008G117300 Sobic007G081000--Sobic008G117300 Sobic004G144700 Sobic004G144700 Sobic007G081000--Sobic004G144700 Sobic004G071750 Sobic004G071750 Sobic007G081000--Sobic004G071750 Sobic005G204000 Sobic005G204000 Sobic007G081000--Sobic005G204000 Sobic004G170100 Sobic004G170100 Sobic007G081000--Sobic004G170100 Sobic010G128000 Sobic010G128000 Sobic007G081000--Sobic010G128000 Sobic001G351100 Sobic001G351100 Sobic003G422700--Sobic001G351100 Sobic009G028500 Sobic009G028500 Sobic003G422700--Sobic009G028500 Sobic003G403500 Sobic003G403500 Sobic003G422700--Sobic003G403500 Sobic006G042200 Sobic006G042200 Sobic003G422700--Sobic006G042200 Sobic004G281300 Sobic004G281300 Sobic003G422700--Sobic004G281300 Sobic003G424400 Sobic003G424400 Sobic003G422700--Sobic003G424400 Sobic001G034300 Sobic001G034300 Sobic003G422700--Sobic001G034300 Sobic009G195300 Sobic009G195300 Sobic003G422700--Sobic009G195300 Sobic008G125600 Sobic008G125600 Sobic003G422700--Sobic008G125600 Sobic006G102400 Sobic006G102400 Sobic008G094300--Sobic006G102400 Sobic004G289600 Sobic004G289600 Sobic008G094300--Sobic004G289600 Sobic009G197200 Sobic009G197200 Sobic008G094300--Sobic009G197200 Sobic008G094300--Sobic008G125600 Sobic003G020600 Sobic003G020600 Sobic008G094300--Sobic003G020600 Sobic001G497200 Sobic001G497200 Sobic008G094300--Sobic001G497200 Sobic005G077400 Sobic005G077400 Sobic008G094300--Sobic005G077400 Sobic006G068400 Sobic006G068400 Sobic008G094300--Sobic006G068400 Sobic008G105900 Sobic008G105900 Sobic008G094300--Sobic008G105900 Sobic006G106700--Sobic010G197700 Sobic004G267300 Sobic004G267300 Sobic006G106700--Sobic004G267300 Sobic003G121900 Sobic003G121900 Sobic006G106700--Sobic003G121900 Sobic001G278600 Sobic001G278600 Sobic006G106700--Sobic001G278600 Sobic006G167900 Sobic006G167900 Sobic006G106700--Sobic006G167900 Sobic006G181400 Sobic006G181400 Sobic006G106700--Sobic006G181400 Sobic005G051300 Sobic005G051300 Sobic006G106700--Sobic005G051300 Sobic006G106700--Sobic007G080900 Sobic002G281700 Sobic002G281700 Sobic006G106700--Sobic002G281700 Sobic010G197700--Sobic001G278600 Sobic008G065400 Sobic008G065400 Sobic010G197700--Sobic008G065400 Sobic008G052500 Sobic008G052500 Sobic010G197700--Sobic008G052500 Sobic010G197700--Sobic010G054500 Sobic001G140200 Sobic001G140200 Sobic010G197700--Sobic001G140200 Sobic003G374500 Sobic003G374500 Sobic010G197700--Sobic003G374500 Sobic007G064250 Sobic007G064250 Sobic010G197700--Sobic007G064250 Sobic003G266700 Sobic003G266700 Sobic010G197700--Sobic003G266700 Sobic008G065800 Sobic008G065800 Sobic010G197700--Sobic008G065800 Sobic010G054500--Sobic008G052500 Sobic010G054500--Sobic001G140200 Sobic005G016900 Sobic005G016900 Sobic010G054500--Sobic005G016900 Sobic007G143100 Sobic007G143100 Sobic010G054500--Sobic007G143100 Sobic007G073750 Sobic007G073750 Sobic010G054500--Sobic007G073750 Sobic007G143200 Sobic007G143200 Sobic010G054500--Sobic007G143200 Sobic009G076700 Sobic009G076700 Sobic010G054500--Sobic009G076700 Sobic007G169600 Sobic007G169600 Sobic010G054500--Sobic007G169600 Sobic002G325600 Sobic002G325600 Sobic010G054500--Sobic002G325600 Sobic010G133200--Sobic006G102400 Sobic001G217700 Sobic001G217700 Sobic010G133200--Sobic001G217700 Sobic009G146800 Sobic009G146800 Sobic010G133200--Sobic009G146800 Sobic010G133200--Sobic004G144700 Sobic003G052300 Sobic003G052300 Sobic010G133200--Sobic003G052300 Sobic001G201966 Sobic001G201966 Sobic010G133200--Sobic001G201966 Sobic010G164200 Sobic010G164200 Sobic010G133200--Sobic010G164200 Sobic001G240800 Sobic001G240800 Sobic010G133200--Sobic001G240800 Sobic004G260800 Sobic004G260800 Sobic010G133200--Sobic004G260800 Sobic003G138550--Sobic004G170100 Sobic001G160700 Sobic001G160700 Sobic003G138550--Sobic001G160700 Sobic002G207300 Sobic002G207300 Sobic007G124100--Sobic002G207300 Sobic007G139900 Sobic007G139900 Sobic007G124100--Sobic007G139900 Sobic001G118900 Sobic001G118900 Sobic007G124100--Sobic001G118900 Sobic002G367900 Sobic002G367900 Sobic007G124100--Sobic002G367900 Sobic001G161200 Sobic001G161200 Sobic007G124100--Sobic001G161200 Sobic004G065900 Sobic004G065900 Sobic007G124100--Sobic004G065900 Sobic007G124100--Sobic009G028500 Sobic004G176900 Sobic004G176900 Sobic007G124100--Sobic004G176900 Sobic003G131500 Sobic003G131500 Sobic007G124100--Sobic003G131500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.