Gene annotation
Transcriptome id Sobic.007G081000.1
Synonym
Functional annotation -
UniProt A0A1B6PGG0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G066600 mTERF domain containing protein, expressed -
2 Sobic.003G138550 - -
3 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
4 Sobic.008G117300 Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.004G144700 ABC transporter family protein, putative, expressed -
6 Sobic.004G071750 - -
7 Sobic.005G204000 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
8 Sobic.004G170100 - -
9 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
10 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
11 Sobic.007G080900 MBTB23 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
12 Sobic.005G099700 expressed protein -
13 Sobic.009G229700 Photosystem I reaction center subunit VI(PubMedID : 26186930)@expressed protein K02695: photosystem I subunit VI
14 Sobic.010G189300 Chorophyll a/b binding protein 8(PubMedID : 26186930)@photosystem I light harvesting complex gene 3(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08909: light-harvesting complex I chlorophyll a/b binding protein 3
15 Sobic.007G221400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
16 Sobic.005G152600 - -
17 Sobic.001G260850 - -
18 Sobic.002G048501 - -
19 Sobic.007G090475 - -
20 Sobic.004G272600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic007G081000 Sobic007G081000 Sobic001G066600 Sobic001G066600 Sobic007G081000--Sobic001G066600 Sobic003G138550 Sobic003G138550 Sobic007G081000--Sobic003G138550 Sobic003G163700 Sobic003G163700 Sobic007G081000--Sobic003G163700 Sobic008G117300 Sobic008G117300 Sobic007G081000--Sobic008G117300 Sobic004G144700 Sobic004G144700 Sobic007G081000--Sobic004G144700 Sobic004G071750 Sobic004G071750 Sobic007G081000--Sobic004G071750 Sobic005G204000 Sobic005G204000 Sobic007G081000--Sobic005G204000 Sobic004G170100 Sobic004G170100 Sobic007G081000--Sobic004G170100 Sobic010G128000 Sobic010G128000 Sobic007G081000--Sobic010G128000 Sobic009G229700 Sobic009G229700 Sobic001G066600--Sobic009G229700 Sobic009G165200 Sobic009G165200 Sobic001G066600--Sobic009G165200 Sobic010G189300 Sobic010G189300 Sobic001G066600--Sobic010G189300 Sobic002G033900 Sobic002G033900 Sobic001G066600--Sobic002G033900 Sobic001G066600--Sobic008G117300 Sobic005G152600 Sobic005G152600 Sobic001G066600--Sobic005G152600 Sobic001G070500 Sobic001G070500 Sobic001G066600--Sobic001G070500 Sobic006G073500 Sobic006G073500 Sobic001G066600--Sobic006G073500 Sobic002G352100 Sobic002G352100 Sobic001G066600--Sobic002G352100 Sobic003G138550--Sobic004G170100 Sobic001G160700 Sobic001G160700 Sobic003G138550--Sobic001G160700 Sobic005G099700 Sobic005G099700 Sobic003G163700--Sobic005G099700 Sobic001G435500 Sobic001G435500 Sobic003G163700--Sobic001G435500 Sobic005G111200 Sobic005G111200 Sobic003G163700--Sobic005G111200 Sobic003G163700--Sobic008G117300 Sobic008G015100 Sobic008G015100 Sobic003G163700--Sobic008G015100 Sobic009G171300 Sobic009G171300 Sobic003G163700--Sobic009G171300 Sobic004G272600 Sobic004G272600 Sobic003G163700--Sobic004G272600 Sobic003G163700--Sobic001G066600 Sobic003G163700--Sobic005G204000 Sobic008G117300--Sobic005G204000 Sobic008G117300--Sobic004G071750 Sobic008G117300--Sobic001G066600 Sobic005G203900 Sobic005G203900 Sobic008G117300--Sobic005G203900 Sobic001G260850 Sobic001G260850 Sobic008G117300--Sobic001G260850 Sobic007G221400 Sobic007G221400 Sobic008G117300--Sobic007G221400 Sobic008G117300--Sobic009G165200 Sobic002G048501 Sobic002G048501 Sobic008G117300--Sobic002G048501 Sobic008G117300--Sobic003G163700 Sobic004G144700--Sobic008G015100 Sobic005G055900 Sobic005G055900 Sobic004G144700--Sobic005G055900 Sobic008G060150 Sobic008G060150 Sobic004G144700--Sobic008G060150 Sobic004G144700--Sobic003G163700 Sobic004G144700--Sobic001G066600 Sobic004G144700--Sobic009G171300 Sobic004G144700--Sobic001G435500 Sobic004G144700--Sobic010G189300 Sobic003G088800 Sobic003G088800 Sobic004G144700--Sobic003G088800 Sobic004G071750--Sobic001G160700 Sobic005G204000--Sobic008G117300 Sobic005G204000--Sobic004G071750 Sobic005G204000--Sobic001G160700 Sobic004G170100--Sobic001G160700 Sobic010G128000--Sobic001G435500 Sobic010G128000--Sobic001G066600 Sobic010G128000--Sobic008G117300 Sobic010G128000--Sobic009G229700 Sobic007G090475 Sobic007G090475 Sobic010G128000--Sobic007G090475 Sobic010G128000--Sobic001G070500 Sobic010G128000--Sobic010G189300 Sobic010G128000--Sobic001G260850 Sobic010G128000--Sobic002G033900
Octagon: transcription factors


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