Gene annotation
Transcriptome id Sobic.004G144700.1
Synonym ATMRP4, Sb04g018530, MRP4, EST3
Functional annotation ABC transporter family protein, putative, expressed
UniProt C5XRP4
Pfam -
Panther DB PTHR24223 PTHR24223:SF215
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47800 : multidrug resistance-associated protein 4
RAP-DB (Rice) LOC_Os04g13220.1 : ABC transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a012426
Brachypodium KQJ81850
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G144700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G015100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
2 Sobic.005G055900 expressed protein -
3 Sobic.008G060150 - -
4 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.001G066600 mTERF domain containing protein, expressed -
6 Sobic.009G171300 PX domain containing protein, expressed -
7 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
8 Sobic.010G189300 Chorophyll a/b binding protein 8(PubMedID : 26186930)@photosystem I light harvesting complex gene 3(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08909: light-harvesting complex I chlorophyll a/b binding protein 3
9 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
10 Sobic.002G327800 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.005G099700 expressed protein -
12 Sobic.004G272600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
13 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
14 Sobic.001G070500 Photosystem I reaction center subunit III(PubMedID : 26186930)@photosystem I subunit F(PubMedID : 26465154)@photosystem I subunit F(PubMedID : 26465154)@Photosystem I subunit F(PubMedID : 29017446)@photosystem I reaction center subunit III, chloroplast precursor, putative, expressed K02694: photosystem I subunit III
15 Sobic.010G194001 - -
16 Sobic.003G369000 - -
17 Sobic.005G111200 PB1 domain containing protein, expressed -
18 Sobic.009G229700 Photosystem I reaction center subunit VI(PubMedID : 26186930)@expressed protein K02695: photosystem I subunit VI
19 Sobic.001G169200 "domain confirmed by Pfam database, expression induced by BR treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
20 Sobic.004G097500 - -


Gene co-expression network
sample Sobic004G144700 Sobic004G144700 Sobic008G015100 Sobic008G015100 Sobic004G144700--Sobic008G015100 Sobic005G055900 Sobic005G055900 Sobic004G144700--Sobic005G055900 Sobic008G060150 Sobic008G060150 Sobic004G144700--Sobic008G060150 Sobic003G163700 Sobic003G163700 Sobic004G144700--Sobic003G163700 Sobic001G066600 Sobic001G066600 Sobic004G144700--Sobic001G066600 Sobic009G171300 Sobic009G171300 Sobic004G144700--Sobic009G171300 Sobic001G435500 Sobic001G435500 Sobic004G144700--Sobic001G435500 Sobic010G189300 Sobic010G189300 Sobic004G144700--Sobic010G189300 Sobic003G088800 Sobic003G088800 Sobic004G144700--Sobic003G088800 Sobic008G015100--Sobic010G189300 Sobic004G272600 Sobic004G272600 Sobic008G015100--Sobic004G272600 Sobic001G070500 Sobic001G070500 Sobic008G015100--Sobic001G070500 Sobic008G015100--Sobic001G435500 Sobic007G136900 Sobic007G136900 Sobic008G015100--Sobic007G136900 Sobic005G099700 Sobic005G099700 Sobic008G015100--Sobic005G099700 Sobic007G223500 Sobic007G223500 Sobic008G015100--Sobic007G223500 Sobic008G101400 Sobic008G101400 Sobic008G015100--Sobic008G101400 Sobic005G111200 Sobic005G111200 Sobic008G015100--Sobic005G111200 Sobic005G055900--Sobic001G435500 Sobic005G055900--Sobic003G088800 Sobic002G337001 Sobic002G337001 Sobic005G055900--Sobic002G337001 Sobic005G055900--Sobic003G163700 Sobic001G275200 Sobic001G275200 Sobic005G055900--Sobic001G275200 Sobic005G055900--Sobic004G144700 Sobic010G128000 Sobic010G128000 Sobic005G055900--Sobic010G128000 Sobic005G203900 Sobic005G203900 Sobic005G055900--Sobic005G203900 Sobic006G135100 Sobic006G135100 Sobic005G055900--Sobic006G135100 Sobic008G060150--Sobic004G144700 Sobic002G215000 Sobic002G215000 Sobic008G060150--Sobic002G215000 Sobic001G201966 Sobic001G201966 Sobic008G060150--Sobic001G201966 Sobic008G105900 Sobic008G105900 Sobic008G060150--Sobic008G105900 Sobic003G074700 Sobic003G074700 Sobic008G060150--Sobic003G074700 Sobic003G114100 Sobic003G114100 Sobic008G060150--Sobic003G114100 Sobic009G010700 Sobic009G010700 Sobic008G060150--Sobic009G010700 Sobic008G131700 Sobic008G131700 Sobic008G060150--Sobic008G131700 Sobic005G063700 Sobic005G063700 Sobic008G060150--Sobic005G063700 Sobic003G163700--Sobic005G099700 Sobic003G163700--Sobic001G435500 Sobic003G163700--Sobic005G111200 Sobic008G117300 Sobic008G117300 Sobic003G163700--Sobic008G117300 Sobic003G163700--Sobic008G015100 Sobic003G163700--Sobic009G171300 Sobic003G163700--Sobic004G272600 Sobic003G163700--Sobic001G066600 Sobic005G204000 Sobic005G204000 Sobic003G163700--Sobic005G204000 Sobic009G229700 Sobic009G229700 Sobic001G066600--Sobic009G229700 Sobic009G165200 Sobic009G165200 Sobic001G066600--Sobic009G165200 Sobic001G066600--Sobic010G189300 Sobic002G033900 Sobic002G033900 Sobic001G066600--Sobic002G033900 Sobic001G066600--Sobic008G117300 Sobic005G152600 Sobic005G152600 Sobic001G066600--Sobic005G152600 Sobic001G066600--Sobic001G070500 Sobic006G073500 Sobic006G073500 Sobic001G066600--Sobic006G073500 Sobic002G352100 Sobic002G352100 Sobic001G066600--Sobic002G352100 Sobic009G171300--Sobic005G099700 Sobic009G171300--Sobic003G163700 Sobic009G171300--Sobic008G015100 Sobic009G171300--Sobic004G272600 Sobic009G171300--Sobic005G111200 Sobic009G171300--Sobic010G189300 Sobic009G171300--Sobic001G066600 Sobic001G463200 Sobic001G463200 Sobic009G171300--Sobic001G463200 Sobic009G171300--Sobic008G101400 Sobic001G435500--Sobic001G070500 Sobic001G435500--Sobic010G189300 Sobic001G435500--Sobic005G099700 Sobic001G435500--Sobic007G136900 Sobic001G435500--Sobic002G033900 Sobic004G056900 Sobic004G056900 Sobic001G435500--Sobic004G056900 Sobic001G435500--Sobic009G229700 Sobic001G435500--Sobic001G066600 Sobic001G435500--Sobic006G073500 Sobic010G189300--Sobic001G070500 Sobic010G189300--Sobic007G136900 Sobic001G046900 Sobic001G046900 Sobic010G189300--Sobic001G046900 Sobic010G189300--Sobic006G073500 Sobic010G189300--Sobic002G352100 Sobic010G189300--Sobic002G033900 Sobic010G189300--Sobic009G229700 Sobic004G235200 Sobic004G235200 Sobic010G189300--Sobic004G235200 Sobic005G087000 Sobic005G087000 Sobic010G189300--Sobic005G087000 Sobic003G088800--Sobic001G275200 Sobic003G088800--Sobic001G435500 Sobic003G088800--Sobic002G337001 Sobic003G088800--Sobic008G015100 Sobic001G019300 Sobic001G019300 Sobic003G088800--Sobic001G019300 Sobic003G088800--Sobic005G055900 Sobic003G088800--Sobic005G203900 Sobic003G369000 Sobic003G369000 Sobic003G088800--Sobic003G369000 Sobic003G088800--Sobic005G099700
Octagon: transcription factors


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