Gene annotation
Transcriptome id Sobic.009G171300.1
Synonym Sb09g023240
Functional annotation PX domain containing protein, expressed
UniProt A0A1B6P9S4
Pfam PF04187 PF11891
Panther DB PTHR31620 PTHR31620:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40400 : Protein of unknown function (DUF399 and DUF3411)
RAP-DB (Rice) LOC_Os05g39680.1 : PX domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027023 , Zm00025a037783
Brachypodium PNT71063 , KQK10387
Barley HORVU1Hr1G070330.5 , HORVU3Hr1G088220.20 , HORVU3Hr1G088220.15 , HORVU3Hr1G088220.14 , HORVU1Hr1G070330.8 , HORVU3Hr1G088220.18 , HORVU1Hr1G070330.2 , HORVU1Hr1G070330.3 , HORVU3Hr1G088220.16 , HORVU1Hr1G070330.6 , HORVU1Hr1G070330.7 , HORVU3Hr1G088220.13 , HORVU3Hr1G088220.10 , HORVU1Hr1G070330.4 , HORVU1Hr1G070330.10 , HORVU1Hr1G070330.11 , HORVU1Hr1G070330.12 , HORVU1Hr1G070330.13 , HORVU1Hr1G070330.14 , HORVU1Hr1G070330.15 , HORVU5Hr1G020100.1 , HORVU5Hr1G020100.2 , HORVU5Hr1G020100.3 , HORVU3Hr1G088220.11 , HORVU3Hr1G088220.8 , HORVU3Hr1G088220.4 , HORVU3Hr1G088220.7 , HORVU3Hr1G088220.6 , HORVU3Hr1G088220.12 , HORVU1Hr1G070330.1
Wheat TraesCS3D02G341400 , TraesCS3B02G379700 , TraesCS3B02G379700 , TraesCS3A02G347800 , TraesCS1B02G307600 , TraesCS1A02G298100 , TraesCS1D02G293100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G099700 expressed protein -
2 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
3 Sobic.008G015100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
4 Sobic.004G272600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
5 Sobic.005G111200 PB1 domain containing protein, expressed -
6 Sobic.010G189300 Chorophyll a/b binding protein 8(PubMedID : 26186930)@photosystem I light harvesting complex gene 3(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08909: light-harvesting complex I chlorophyll a/b binding protein 3
7 Sobic.001G066600 mTERF domain containing protein, expressed -
8 Sobic.001G463200 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
9 Sobic.008G101400 - -
10 Sobic.001G070500 Photosystem I reaction center subunit III(PubMedID : 26186930)@photosystem I subunit F(PubMedID : 26465154)@photosystem I subunit F(PubMedID : 26465154)@Photosystem I subunit F(PubMedID : 29017446)@photosystem I reaction center subunit III, chloroplast precursor, putative, expressed K02694: photosystem I subunit III
11 Sobic.004G144700 ABC transporter family protein, putative, expressed -
12 Sobic.005G055900 expressed protein -
13 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
14 Sobic.001G169200 "domain confirmed by Pfam database, expression induced by BR treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
15 Sobic.006G073500 hypothetical protein SORBIDRAFT_06g016090(PubMedID : 26186930)@Photosystem I subunit O PSI-O (At)(PubMedID : 27208977)@membrane protein, putative, expressed K14332: photosystem I subunit PsaO
16 Sobic.002G033900 Photosystem I reaction center subunit psaK(PubMedID : 26186930)@photosystem I reaction center subunit, chloroplast precursor, putative, expressed K02698: photosystem I subunit X
17 Sobic.009G229700 Photosystem I reaction center subunit VI(PubMedID : 26186930)@expressed protein K02695: photosystem I subunit VI
18 Sobic.001G184100 Osmotic stress potassium transporter(PubMedID : 28620409)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
19 Sobic.002G220500 cytochrome P450, putative, expressed -
20 Sobic.004G235200 ATP synthase delta chain(PubMedID : 26186930)@-(PubMedID : 29017446)@ATP synthase F1, delta subunit family protein, putative, expressed K02113: ATPF1D, F-type H+-transporting ATPase subunit delta


Gene co-expression network
sample Sobic009G171300 Sobic009G171300 Sobic005G099700 Sobic005G099700 Sobic009G171300--Sobic005G099700 Sobic003G163700 Sobic003G163700 Sobic009G171300--Sobic003G163700 Sobic008G015100 Sobic008G015100 Sobic009G171300--Sobic008G015100 Sobic004G272600 Sobic004G272600 Sobic009G171300--Sobic004G272600 Sobic005G111200 Sobic005G111200 Sobic009G171300--Sobic005G111200 Sobic010G189300 Sobic010G189300 Sobic009G171300--Sobic010G189300 Sobic001G066600 Sobic001G066600 Sobic009G171300--Sobic001G066600 Sobic001G463200 Sobic001G463200 Sobic009G171300--Sobic001G463200 Sobic008G101400 Sobic008G101400 Sobic009G171300--Sobic008G101400 Sobic001G435500 Sobic001G435500 Sobic005G099700--Sobic001G435500 Sobic001G070500 Sobic001G070500 Sobic005G099700--Sobic001G070500 Sobic005G099700--Sobic010G189300 Sobic005G099700--Sobic003G163700 Sobic005G099700--Sobic004G272600 Sobic002G033900 Sobic002G033900 Sobic005G099700--Sobic002G033900 Sobic005G099700--Sobic001G066600 Sobic006G073500 Sobic006G073500 Sobic005G099700--Sobic006G073500 Sobic009G229700 Sobic009G229700 Sobic005G099700--Sobic009G229700 Sobic003G163700--Sobic005G099700 Sobic003G163700--Sobic001G435500 Sobic003G163700--Sobic005G111200 Sobic008G117300 Sobic008G117300 Sobic003G163700--Sobic008G117300 Sobic003G163700--Sobic008G015100 Sobic003G163700--Sobic009G171300 Sobic003G163700--Sobic004G272600 Sobic003G163700--Sobic001G066600 Sobic005G204000 Sobic005G204000 Sobic003G163700--Sobic005G204000 Sobic008G015100--Sobic010G189300 Sobic008G015100--Sobic004G272600 Sobic008G015100--Sobic001G070500 Sobic008G015100--Sobic001G435500 Sobic007G136900 Sobic007G136900 Sobic008G015100--Sobic007G136900 Sobic008G015100--Sobic005G099700 Sobic007G223500 Sobic007G223500 Sobic008G015100--Sobic007G223500 Sobic008G015100--Sobic008G101400 Sobic008G015100--Sobic005G111200 Sobic004G272600--Sobic001G070500 Sobic004G272600--Sobic010G189300 Sobic003G052500 Sobic003G052500 Sobic004G272600--Sobic003G052500 Sobic004G272600--Sobic002G033900 Sobic004G272600--Sobic006G073500 Sobic004G071800 Sobic004G071800 Sobic004G272600--Sobic004G071800 Sobic004G235200 Sobic004G235200 Sobic004G272600--Sobic004G235200 Sobic004G272600--Sobic008G015100 Sobic004G272600--Sobic009G229700 Sobic005G111200--Sobic003G163700 Sobic005G111200--Sobic008G015100 Sobic005G111200--Sobic001G463200 Sobic005G111200--Sobic004G272600 Sobic010G164200 Sobic010G164200 Sobic005G111200--Sobic010G164200 Sobic005G111200--Sobic009G171300 Sobic008G016250 Sobic008G016250 Sobic005G111200--Sobic008G016250 Sobic001G425400 Sobic001G425400 Sobic005G111200--Sobic001G425400 Sobic005G111200--Sobic005G099700 Sobic010G189300--Sobic001G070500 Sobic010G189300--Sobic007G136900 Sobic001G046900 Sobic001G046900 Sobic010G189300--Sobic001G046900 Sobic010G189300--Sobic006G073500 Sobic002G352100 Sobic002G352100 Sobic010G189300--Sobic002G352100 Sobic010G189300--Sobic002G033900 Sobic010G189300--Sobic009G229700 Sobic010G189300--Sobic004G235200 Sobic005G087000 Sobic005G087000 Sobic010G189300--Sobic005G087000 Sobic001G066600--Sobic009G229700 Sobic009G165200 Sobic009G165200 Sobic001G066600--Sobic009G165200 Sobic001G066600--Sobic010G189300 Sobic001G066600--Sobic002G033900 Sobic001G066600--Sobic008G117300 Sobic005G152600 Sobic005G152600 Sobic001G066600--Sobic005G152600 Sobic001G066600--Sobic001G070500 Sobic001G066600--Sobic006G073500 Sobic001G066600--Sobic002G352100 Sobic001G463200--Sobic004G272600 Sobic008G026800 Sobic008G026800 Sobic001G463200--Sobic008G026800 Sobic004G035601 Sobic004G035601 Sobic001G463200--Sobic004G035601 Sobic002G064000 Sobic002G064000 Sobic001G463200--Sobic002G064000 Sobic006G147300 Sobic006G147300 Sobic001G463200--Sobic006G147300 Sobic006G051300 Sobic006G051300 Sobic001G463200--Sobic006G051300 Sobic001G463200--Sobic005G111200 Sobic001G463200--Sobic008G015100 Sobic008G053200 Sobic008G053200 Sobic001G463200--Sobic008G053200 Sobic008G101400--Sobic008G015100 Sobic004G201700 Sobic004G201700 Sobic008G101400--Sobic004G201700 Sobic008G101400--Sobic010G189300 Sobic002G316700 Sobic002G316700 Sobic008G101400--Sobic002G316700 Sobic009G062500 Sobic009G062500 Sobic008G101400--Sobic009G062500 Sobic009G164300 Sobic009G164300 Sobic008G101400--Sobic009G164300 Sobic008G101400--Sobic007G136900 Sobic008G101400--Sobic007G223500 Sobic008G101400--Sobic001G435500
Octagon: transcription factors


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