Gene annotation
Transcriptome id Sobic.006G025300.2,Sobic.006G025300.1,Sobic.006G025300.3
Synonym Sb06g002300
Functional annotation white-brown complex homolog protein, putative, expressed
UniProt A0A1B6PJP0 , A0A1Z5RBT2 , C5YCR2
Pfam PF00005 PF01061 PF00005
Panther DB PTHR19241 PTHR19241:SF217
NCBI CDD KOG0061; Transporter, ABC superfamily (Breast cancer resistance protein)
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0016887ATPase activity GO:0005524ATP binding GO:0016887ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT2G37010 : non-intrinsic ABC protein 12
RAP-DB (Rice) LOC_Os04g11820.1 : white-brown complex homolog protein, putative, expressed
MaizeGDB (Corn) Zm00025a012455 , Zm00025a055621
Brachypodium -
Barley -
Wheat TraesCS2D02G048800 , TraesCS2A02G049700 , TraesCS2A02G049700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G342600 PDI, putative, expressed K17609: nucleoredoxin
2 Sobic.009G195300 DUF803 domain containing, putative, expressed -
3 Sobic.003G424400 Spotted leaf protein(PubMedID : 24906815)@armadillo repeat-containing protein, putative, expressed K08332: vacuolar protein 8
4 Sobic.010G068500 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
5 Sobic.001G312900 transporter family protein, putative, expressed -
6 Sobic.006G052500 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed K00164: OGDH, 2-oxoglutarate dehydrogenase E1 component
7 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.003G422700 amino acid permease family protein, putative, expressed -
9 Sobic.003G272400 DUF292 domain containing protein, expressed -
10 Sobic.002G281700 eukaryotic aspartyl protease domain containing protein, expressed -
11 Sobic.002G359000 formin, putative, expressed -
12 Sobic.003G372800 expressed protein -
13 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
14 Sobic.001G154500 tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
15 Sobic.008G189400 NBS-LRR disease resistance protein, putative, expressed -
16 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
17 Sobic.010G054500 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
18 Sobic.007G136700 YGL010w, putative, expressed -
19 Sobic.002G306000 calmodulin-binding transcription activator 5, putative, expressed -
20 Sobic.009G042700 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -


Gene co-expression network
sample Sobic006G025300 Sobic006G025300 Sobic001G342600 Sobic001G342600 Sobic006G025300--Sobic001G342600 Sobic009G195300 Sobic009G195300 Sobic006G025300--Sobic009G195300 Sobic003G424400 Sobic003G424400 Sobic006G025300--Sobic003G424400 Sobic010G068500 Sobic010G068500 Sobic006G025300--Sobic010G068500 Sobic001G312900 Sobic001G312900 Sobic006G025300--Sobic001G312900 Sobic006G052500 Sobic006G052500 Sobic006G025300--Sobic006G052500 Sobic001G110900 Sobic001G110900 Sobic006G025300--Sobic001G110900 Sobic003G422700 Sobic003G422700 Sobic006G025300--Sobic003G422700 Sobic003G272400 Sobic003G272400 Sobic006G025300--Sobic003G272400 Sobic001G342600--Sobic006G025300 Sobic007G178200 Sobic007G178200 Sobic001G342600--Sobic007G178200 Sobic006G191100 Sobic006G191100 Sobic001G342600--Sobic006G191100 Sobic003G056500 Sobic003G056500 Sobic001G342600--Sobic003G056500 Sobic003G278700 Sobic003G278700 Sobic001G342600--Sobic003G278700 Sobic005G094200 Sobic005G094200 Sobic001G342600--Sobic005G094200 Sobic006G267700 Sobic006G267700 Sobic001G342600--Sobic006G267700 Sobic002G359000 Sobic002G359000 Sobic001G342600--Sobic002G359000 Sobic002G306000 Sobic002G306000 Sobic001G342600--Sobic002G306000 Sobic003G119800 Sobic003G119800 Sobic009G195300--Sobic003G119800 Sobic004G347900 Sobic004G347900 Sobic009G195300--Sobic004G347900 Sobic008G189400 Sobic008G189400 Sobic009G195300--Sobic008G189400 Sobic009G195300--Sobic003G424400 Sobic009G195300--Sobic006G025300 Sobic007G006900 Sobic007G006900 Sobic009G195300--Sobic007G006900 Sobic002G134600 Sobic002G134600 Sobic009G195300--Sobic002G134600 Sobic003G361500 Sobic003G361500 Sobic009G195300--Sobic003G361500 Sobic008G139700 Sobic008G139700 Sobic009G195300--Sobic008G139700 Sobic003G424400--Sobic003G119800 Sobic009G230700 Sobic009G230700 Sobic003G424400--Sobic009G230700 Sobic001G420700 Sobic001G420700 Sobic003G424400--Sobic001G420700 Sobic003G424400--Sobic009G195300 Sobic009G134600 Sobic009G134600 Sobic003G424400--Sobic009G134600 Sobic003G424400--Sobic008G189400 Sobic007G136700 Sobic007G136700 Sobic003G424400--Sobic007G136700 Sobic003G424400--Sobic006G025300 Sobic003G424400--Sobic007G178200 Sobic009G219000 Sobic009G219000 Sobic010G068500--Sobic009G219000 Sobic006G119800 Sobic006G119800 Sobic010G068500--Sobic006G119800 Sobic010G068500--Sobic002G134600 Sobic003G309200 Sobic003G309200 Sobic010G068500--Sobic003G309200 Sobic003G010400 Sobic003G010400 Sobic010G068500--Sobic003G010400 Sobic006G225600 Sobic006G225600 Sobic010G068500--Sobic006G225600 Sobic001G162100 Sobic001G162100 Sobic010G068500--Sobic001G162100 Sobic001G425800 Sobic001G425800 Sobic010G068500--Sobic001G425800 Sobic001G516100 Sobic001G516100 Sobic010G068500--Sobic001G516100 Sobic001G362200 Sobic001G362200 Sobic001G312900--Sobic001G362200 Sobic003G109700 Sobic003G109700 Sobic001G312900--Sobic003G109700 Sobic001G312900--Sobic002G134600 Sobic004G004300 Sobic004G004300 Sobic001G312900--Sobic004G004300 Sobic002G350600 Sobic002G350600 Sobic001G312900--Sobic002G350600 Sobic006G280000 Sobic006G280000 Sobic001G312900--Sobic006G280000 Sobic009G042700 Sobic009G042700 Sobic001G312900--Sobic009G042700 Sobic001G312900--Sobic006G052500 Sobic003G331400 Sobic003G331400 Sobic001G312900--Sobic003G331400 Sobic002G310200 Sobic002G310200 Sobic006G052500--Sobic002G310200 Sobic006G052500--Sobic009G219000 Sobic006G052500--Sobic009G042700 Sobic002G067600 Sobic002G067600 Sobic006G052500--Sobic002G067600 Sobic007G203500 Sobic007G203500 Sobic006G052500--Sobic007G203500 Sobic006G052800 Sobic006G052800 Sobic006G052500--Sobic006G052800 Sobic010G053800 Sobic010G053800 Sobic006G052500--Sobic010G053800 Sobic007G134600 Sobic007G134600 Sobic006G052500--Sobic007G134600 Sobic010G056000 Sobic010G056000 Sobic006G052500--Sobic010G056000 Sobic006G220300 Sobic006G220300 Sobic001G110900--Sobic006G220300 Sobic001G110900--Sobic003G272400 Sobic001G140200 Sobic001G140200 Sobic001G110900--Sobic001G140200 Sobic003G198150 Sobic003G198150 Sobic001G110900--Sobic003G198150 Sobic010G233450 Sobic010G233450 Sobic001G110900--Sobic010G233450 Sobic002G110200 Sobic002G110200 Sobic001G110900--Sobic002G110200 Sobic001G509400 Sobic001G509400 Sobic001G110900--Sobic001G509400 Sobic002G013900 Sobic002G013900 Sobic001G110900--Sobic002G013900 Sobic005G209500 Sobic005G209500 Sobic001G110900--Sobic005G209500 Sobic001G351100 Sobic001G351100 Sobic003G422700--Sobic001G351100 Sobic009G028500 Sobic009G028500 Sobic003G422700--Sobic009G028500 Sobic003G403500 Sobic003G403500 Sobic003G422700--Sobic003G403500 Sobic006G042200 Sobic006G042200 Sobic003G422700--Sobic006G042200 Sobic004G281300 Sobic004G281300 Sobic003G422700--Sobic004G281300 Sobic003G422700--Sobic003G424400 Sobic001G034300 Sobic001G034300 Sobic003G422700--Sobic001G034300 Sobic003G422700--Sobic009G195300 Sobic008G125600 Sobic008G125600 Sobic003G422700--Sobic008G125600 Sobic004G353600 Sobic004G353600 Sobic003G272400--Sobic004G353600 Sobic003G281900 Sobic003G281900 Sobic003G272400--Sobic003G281900 Sobic003G252400 Sobic003G252400 Sobic003G272400--Sobic003G252400 Sobic003G272400--Sobic002G306000 Sobic010G260300 Sobic010G260300 Sobic003G272400--Sobic010G260300 Sobic003G126300 Sobic003G126300 Sobic003G272400--Sobic003G126300 Sobic006G207900 Sobic006G207900 Sobic003G272400--Sobic006G207900 Sobic003G272400--Sobic001G110900 Sobic004G309600 Sobic004G309600 Sobic003G272400--Sobic004G309600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.