Gene annotation
Transcriptome id Sobic.002G281700.1
Synonym Sb02g031460
Functional annotation eukaryotic aspartyl protease domain containing protein, expressed
UniProt C5X6X8
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF232
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT4G35880 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os09g37012.1 : eukaryotic aspartyl protease domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049297 , Zm00025a018504
Brachypodium PNT75320 , KQJ91268 , KQJ91269 , PNT75319 , KQK16726
Barley HORVU2Hr1G010520.10 , HORVU2Hr1G010520.11 , HORVU2Hr1G010520.12 , HORVU2Hr1G010520.13 , HORVU2Hr1G010520.15 , HORVU2Hr1G010520.16 , HORVU2Hr1G010520.17 , HORVU2Hr1G010520.18 , HORVU2Hr1G010520.19 , HORVU5Hr1G084490.10 , HORVU5Hr1G084490.11 , HORVU2Hr1G010520.24 , HORVU2Hr1G010520.21 , HORVU2Hr1G010520.20 , HORVU2Hr1G010520.22 , HORVU2Hr1G010520.2 , HORVU2Hr1G010520.1 , HORVU2Hr1G010520.7 , HORVU2Hr1G010520.8 , HORVU2Hr1G010520.9 , HORVU5Hr1G084490.8 , HORVU5Hr1G084490.9 , HORVU5Hr1G084490.4 , HORVU5Hr1G084490.5 , HORVU5Hr1G084490.6 , HORVU5Hr1G084490.7 , HORVU5Hr1G084490.1 , HORVU5Hr1G084490.2 , HORVU5Hr1G084490.3 , HORVU7Hr1G118020.1 , HORVU7Hr1G118020.3 , HORVU7Hr1G118020.2 , HORVU7Hr1G118020.4 , HORVU7Hr1G118020.7 , HORVU7Hr1G118020.8 , HORVU7Hr1G118020.5
Wheat TraesCS2B02G079700 , TraesCS2A02G067500 , TraesCS7A02G537200 , TraesCS5B02G334700 , TraesCS5D02G340300 , TraesCS5A02G335500 , TraesCS5A02G335500 , TraesCS7D02G524300 , TraesCS2D02G065800 , TraesCS2D02G065800
Populus -


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cDNA sequences
Sobic.002G281700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G342600 PDI, putative, expressed K17609: nucleoredoxin
2 Sobic.006G218700 tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.008G096100 expressed protein -
4 Sobic.006G052500 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed K00164: OGDH, 2-oxoglutarate dehydrogenase E1 component
5 Sobic.009G195300 DUF803 domain containing, putative, expressed -
6 Sobic.007G026100 Divergent PAP2 family domain containing protein, expressed K09775: uncharacterized protein
7 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
9 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
10 Sobic.006G267700 fiber protein Fb34, putative, expressed -
11 Sobic.008G188700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
12 Sobic.001G420700 clathrin assembly protein, putative, expressed -
13 Sobic.009G147000 potassium channel AKT1, putative, expressed -
14 Sobic.004G198000 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
15 Sobic.006G025300 white-brown complex homolog protein, putative, expressed -
16 Sobic.009G134600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed K14493: gibberellin receptor GID1
17 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
18 Sobic.003G044200 C2 domain containing protein, putative, expressed -
19 Sobic.002G055900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@Transcriptional repressor(PubMedID : 30367619)@Negative regulator of ABA(PubMedID : 30367619)@OsIAA24 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
20 Sobic.002G292600 phytoene synthase(PubMedID : 22672222)@carotenoid biosynthesi(PubMedID : 18162592)@PSY3 expression influences root carotenogenesis and defines a potential bottleneck upstream of NCED(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase


Gene co-expression network
sample Sobic002G281700 Sobic002G281700 Sobic001G342600 Sobic001G342600 Sobic002G281700--Sobic001G342600 Sobic006G218700 Sobic006G218700 Sobic002G281700--Sobic006G218700 Sobic008G096100 Sobic008G096100 Sobic002G281700--Sobic008G096100 Sobic006G052500 Sobic006G052500 Sobic002G281700--Sobic006G052500 Sobic009G195300 Sobic009G195300 Sobic002G281700--Sobic009G195300 Sobic007G026100 Sobic007G026100 Sobic002G281700--Sobic007G026100 Sobic003G116700 Sobic003G116700 Sobic002G281700--Sobic003G116700 Sobic003G119800 Sobic003G119800 Sobic002G281700--Sobic003G119800 Sobic001G138300 Sobic001G138300 Sobic002G281700--Sobic001G138300 Sobic006G025300 Sobic006G025300 Sobic001G342600--Sobic006G025300 Sobic007G178200 Sobic007G178200 Sobic001G342600--Sobic007G178200 Sobic006G191100 Sobic006G191100 Sobic001G342600--Sobic006G191100 Sobic003G056500 Sobic003G056500 Sobic001G342600--Sobic003G056500 Sobic003G278700 Sobic003G278700 Sobic001G342600--Sobic003G278700 Sobic005G094200 Sobic005G094200 Sobic001G342600--Sobic005G094200 Sobic006G267700 Sobic006G267700 Sobic001G342600--Sobic006G267700 Sobic002G359000 Sobic002G359000 Sobic001G342600--Sobic002G359000 Sobic002G306000 Sobic002G306000 Sobic001G342600--Sobic002G306000 Sobic009G134600 Sobic009G134600 Sobic006G218700--Sobic009G134600 Sobic003G396000 Sobic003G396000 Sobic006G218700--Sobic003G396000 Sobic003G044200 Sobic003G044200 Sobic006G218700--Sobic003G044200 Sobic006G218700--Sobic003G119800 Sobic003G379700 Sobic003G379700 Sobic006G218700--Sobic003G379700 Sobic001G076000 Sobic001G076000 Sobic006G218700--Sobic001G076000 Sobic009G167600 Sobic009G167600 Sobic006G218700--Sobic009G167600 Sobic006G218700--Sobic003G056500 Sobic003G376700 Sobic003G376700 Sobic006G218700--Sobic003G376700 Sobic008G041700 Sobic008G041700 Sobic008G096100--Sobic008G041700 Sobic008G153600 Sobic008G153600 Sobic008G096100--Sobic008G153600 Sobic004G198000 Sobic004G198000 Sobic008G096100--Sobic004G198000 Sobic008G136200 Sobic008G136200 Sobic008G096100--Sobic008G136200 Sobic007G191100 Sobic007G191100 Sobic008G096100--Sobic007G191100 Sobic001G464100 Sobic001G464100 Sobic008G096100--Sobic001G464100 Sobic007G205800 Sobic007G205800 Sobic008G096100--Sobic007G205800 SobicK016900 SobicK016900 Sobic008G096100--SobicK016900 Sobic004G150400 Sobic004G150400 Sobic008G096100--Sobic004G150400 Sobic002G310200 Sobic002G310200 Sobic006G052500--Sobic002G310200 Sobic009G219000 Sobic009G219000 Sobic006G052500--Sobic009G219000 Sobic009G042700 Sobic009G042700 Sobic006G052500--Sobic009G042700 Sobic002G067600 Sobic002G067600 Sobic006G052500--Sobic002G067600 Sobic007G203500 Sobic007G203500 Sobic006G052500--Sobic007G203500 Sobic006G052800 Sobic006G052800 Sobic006G052500--Sobic006G052800 Sobic010G053800 Sobic010G053800 Sobic006G052500--Sobic010G053800 Sobic007G134600 Sobic007G134600 Sobic006G052500--Sobic007G134600 Sobic010G056000 Sobic010G056000 Sobic006G052500--Sobic010G056000 Sobic009G195300--Sobic003G119800 Sobic004G347900 Sobic004G347900 Sobic009G195300--Sobic004G347900 Sobic008G189400 Sobic008G189400 Sobic009G195300--Sobic008G189400 Sobic003G424400 Sobic003G424400 Sobic009G195300--Sobic003G424400 Sobic009G195300--Sobic006G025300 Sobic007G006900 Sobic007G006900 Sobic009G195300--Sobic007G006900 Sobic002G134600 Sobic002G134600 Sobic009G195300--Sobic002G134600 Sobic003G361500 Sobic003G361500 Sobic009G195300--Sobic003G361500 Sobic008G139700 Sobic008G139700 Sobic009G195300--Sobic008G139700 Sobic008G188700 Sobic008G188700 Sobic007G026100--Sobic008G188700 Sobic004G231400 Sobic004G231400 Sobic007G026100--Sobic004G231400 Sobic004G079100 Sobic004G079100 Sobic007G026100--Sobic004G079100 Sobic003G332401 Sobic003G332401 Sobic007G026100--Sobic003G332401 Sobic004G274700 Sobic004G274700 Sobic007G026100--Sobic004G274700 Sobic005G046100 Sobic005G046100 Sobic007G026100--Sobic005G046100 Sobic001G478300 Sobic001G478300 Sobic007G026100--Sobic001G478300 Sobic001G149700 Sobic001G149700 Sobic007G026100--Sobic001G149700 Sobic006G160600 Sobic006G160600 Sobic007G026100--Sobic006G160600 Sobic001G206000 Sobic001G206000 Sobic003G116700--Sobic001G206000 Sobic003G116700--Sobic001G149700 Sobic001G441600 Sobic001G441600 Sobic003G116700--Sobic001G441600 Sobic007G079700 Sobic007G079700 Sobic003G116700--Sobic007G079700 Sobic004G014000 Sobic004G014000 Sobic003G116700--Sobic004G014000 Sobic007G126200 Sobic007G126200 Sobic003G116700--Sobic007G126200 Sobic009G065000 Sobic009G065000 Sobic003G116700--Sobic009G065000 Sobic010G055500 Sobic010G055500 Sobic003G116700--Sobic010G055500 Sobic001G078500 Sobic001G078500 Sobic003G116700--Sobic001G078500 Sobic003G119800--Sobic009G134600 Sobic003G119800--Sobic008G189400 Sobic001G290200 Sobic001G290200 Sobic003G119800--Sobic001G290200 Sobic003G119800--Sobic009G195300 Sobic004G031600 Sobic004G031600 Sobic003G119800--Sobic004G031600 Sobic001G463000 Sobic001G463000 Sobic003G119800--Sobic001G463000 Sobic001G472600 Sobic001G472600 Sobic003G119800--Sobic001G472600 Sobic009G230700 Sobic009G230700 Sobic003G119800--Sobic009G230700 Sobic003G119800--Sobic009G167600 Sobic001G138300--Sobic004G079100 Sobic003G350600 Sobic003G350600 Sobic001G138300--Sobic003G350600 Sobic001G430800 Sobic001G430800 Sobic001G138300--Sobic001G430800 Sobic001G138300--Sobic004G231400 Sobic001G054200 Sobic001G054200 Sobic001G138300--Sobic001G054200 Sobic006G212100 Sobic006G212100 Sobic001G138300--Sobic006G212100 Sobic001G138300--Sobic001G441600 Sobic006G263900 Sobic006G263900 Sobic001G138300--Sobic006G263900 Sobic002G129000 Sobic002G129000 Sobic001G138300--Sobic002G129000
Octagon: transcription factors


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