Gene annotation
Transcriptome id Sobic.009G195300.1
Synonym Sb09g025370
Functional annotation DUF803 domain containing, putative, expressed
UniProt C5Z0W5
Pfam PF05653
Panther DB PTHR12570 PTHR12570:SF19
NCBI CDD KOG2922; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015693magnesium ion transport GO:0015095magnesium ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT1G71900 : Protein of unknown function (DUF803)
RAP-DB (Rice) LOC_Os05g43790.1 : DUF803 domain containing, putative, expressed
MaizeGDB (Corn) Zm00025a044212
Brachypodium KQK05433 , KQK05432 , KQK05431 , KQK05430 , KQK05434 , KQJ85527 , KQK05428 , KQK05429 , KQK05425 , KQK05426 , KQK05427 , PNT70926 , PNT70927
Barley HORVU2Hr1G127500.14 , HORVU1Hr1G077020.19 , HORVU1Hr1G077020.18 , HORVU1Hr1G077020.17 , HORVU1Hr1G077020.16 , HORVU1Hr1G077020.15 , HORVU1Hr1G077020.14 , HORVU1Hr1G077020.13 , HORVU1Hr1G077020.12 , HORVU1Hr1G077020.11 , HORVU1Hr1G077020.10 , HORVU2Hr1G127500.5 , HORVU2Hr1G127500.4 , HORVU2Hr1G127500.7 , HORVU2Hr1G127500.3 , HORVU1Hr1G077020.24 , HORVU1Hr1G077020.25 , HORVU1Hr1G077020.23 , HORVU1Hr1G077020.20 , HORVU1Hr1G077020.21 , HORVU1Hr1G077020.7 , HORVU1Hr1G077020.6 , HORVU1Hr1G077020.5 , HORVU1Hr1G077020.4 , HORVU1Hr1G077020.3 , HORVU1Hr1G077020.2 , HORVU1Hr1G077020.1 , HORVU2Hr1G127500.11 , HORVU1Hr1G077020.9 , HORVU1Hr1G077020.8
Wheat TraesCS1A02G333200 , TraesCS1A02G333200 , TraesCS1A02G333200 , TraesCS2D02G567600 , TraesCS1A02G333200 , TraesCS2B02G617600 , TraesCS2A02G557600
Populus -


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cDNA sequences
Sobic.009G195300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
2 Sobic.004G347900 protein kinase APK1A, chloroplast precursor, putative, expressed -
3 Sobic.008G189400 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.003G424400 Spotted leaf protein(PubMedID : 24906815)@armadillo repeat-containing protein, putative, expressed K08332: vacuolar protein 8
5 Sobic.006G025300 white-brown complex homolog protein, putative, expressed -
6 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
7 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
8 Sobic.003G361500 zinc finger family protein, putative, expressed -
9 Sobic.008G139700 bromodomain associated family protein, expressed K14649: transcription initiation factor TFIID subunit 8
10 Sobic.008G188700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
11 Sobic.001G351700 calmodulin-binding transcription activator, putative, expressed -
12 Sobic.001G420700 clathrin assembly protein, putative, expressed -
13 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
14 Sobic.006G109300 protein binding protein, putative, expressed -
15 Sobic.003G328600 proline-rich family protein, putative, expressed -
16 Sobic.001G472600 gibberellin response modulator protein, putative, expressed -
17 Sobic.001G463000 syntaxin 6, N-terminal domain containing protein, expressed -
18 Sobic.006G032900 endonuclease/exonuclease/phosphatase family protein, putative, expressed -
19 Sobic.001G425800 src homology-3 domain protein 3, putative, expressed -
20 Sobic.006G055400 hydroxyproline-rich glycoprotein family protein, putative, expressed -


Gene co-expression network
sample Sobic009G195300 Sobic009G195300 Sobic003G119800 Sobic003G119800 Sobic009G195300--Sobic003G119800 Sobic004G347900 Sobic004G347900 Sobic009G195300--Sobic004G347900 Sobic008G189400 Sobic008G189400 Sobic009G195300--Sobic008G189400 Sobic003G424400 Sobic003G424400 Sobic009G195300--Sobic003G424400 Sobic006G025300 Sobic006G025300 Sobic009G195300--Sobic006G025300 Sobic007G006900 Sobic007G006900 Sobic009G195300--Sobic007G006900 Sobic002G134600 Sobic002G134600 Sobic009G195300--Sobic002G134600 Sobic003G361500 Sobic003G361500 Sobic009G195300--Sobic003G361500 Sobic008G139700 Sobic008G139700 Sobic009G195300--Sobic008G139700 Sobic009G134600 Sobic009G134600 Sobic003G119800--Sobic009G134600 Sobic003G119800--Sobic008G189400 Sobic001G290200 Sobic001G290200 Sobic003G119800--Sobic001G290200 Sobic003G119800--Sobic009G195300 Sobic004G031600 Sobic004G031600 Sobic003G119800--Sobic004G031600 Sobic001G463000 Sobic001G463000 Sobic003G119800--Sobic001G463000 Sobic001G472600 Sobic001G472600 Sobic003G119800--Sobic001G472600 Sobic009G230700 Sobic009G230700 Sobic003G119800--Sobic009G230700 Sobic009G167600 Sobic009G167600 Sobic003G119800--Sobic009G167600 Sobic004G347900--Sobic009G195300 Sobic003G317200 Sobic003G317200 Sobic004G347900--Sobic003G317200 Sobic001G420700 Sobic001G420700 Sobic004G347900--Sobic001G420700 Sobic002G272600 Sobic002G272600 Sobic004G347900--Sobic002G272600 Sobic004G347900--Sobic009G230700 Sobic004G347900--Sobic003G119800 Sobic008G142700 Sobic008G142700 Sobic004G347900--Sobic008G142700 Sobic004G347900--Sobic003G361500 Sobic001G441600 Sobic001G441600 Sobic004G347900--Sobic001G441600 Sobic008G189400--Sobic003G119800 Sobic009G137800 Sobic009G137800 Sobic008G189400--Sobic009G137800 Sobic010G056000 Sobic010G056000 Sobic008G189400--Sobic010G056000 Sobic006G273200 Sobic006G273200 Sobic008G189400--Sobic006G273200 Sobic001G351700 Sobic001G351700 Sobic008G189400--Sobic001G351700 Sobic002G365100 Sobic002G365100 Sobic008G189400--Sobic002G365100 Sobic007G145200 Sobic007G145200 Sobic008G189400--Sobic007G145200 Sobic008G189400--Sobic009G195300 Sobic008G025900 Sobic008G025900 Sobic008G189400--Sobic008G025900 Sobic003G424400--Sobic003G119800 Sobic003G424400--Sobic009G230700 Sobic003G424400--Sobic001G420700 Sobic003G424400--Sobic009G195300 Sobic003G424400--Sobic009G134600 Sobic003G424400--Sobic008G189400 Sobic007G136700 Sobic007G136700 Sobic003G424400--Sobic007G136700 Sobic003G424400--Sobic006G025300 Sobic007G178200 Sobic007G178200 Sobic003G424400--Sobic007G178200 Sobic001G342600 Sobic001G342600 Sobic006G025300--Sobic001G342600 Sobic006G025300--Sobic009G195300 Sobic006G025300--Sobic003G424400 Sobic010G068500 Sobic010G068500 Sobic006G025300--Sobic010G068500 Sobic001G312900 Sobic001G312900 Sobic006G025300--Sobic001G312900 Sobic006G052500 Sobic006G052500 Sobic006G025300--Sobic006G052500 Sobic001G110900 Sobic001G110900 Sobic006G025300--Sobic001G110900 Sobic003G422700 Sobic003G422700 Sobic006G025300--Sobic003G422700 Sobic003G272400 Sobic003G272400 Sobic006G025300--Sobic003G272400 Sobic007G006900--Sobic002G134600 Sobic001G425800 Sobic001G425800 Sobic007G006900--Sobic001G425800 Sobic003G328600 Sobic003G328600 Sobic007G006900--Sobic003G328600 Sobic001G362200 Sobic001G362200 Sobic007G006900--Sobic001G362200 Sobic002G400200 Sobic002G400200 Sobic007G006900--Sobic002G400200 Sobic010G249100 Sobic010G249100 Sobic007G006900--Sobic010G249100 Sobic002G067600 Sobic002G067600 Sobic007G006900--Sobic002G067600 Sobic009G238850 Sobic009G238850 Sobic007G006900--Sobic009G238850 Sobic007G006900--Sobic003G119800 Sobic003G309200 Sobic003G309200 Sobic002G134600--Sobic003G309200 Sobic002G134600--Sobic007G006900 Sobic001G226700 Sobic001G226700 Sobic002G134600--Sobic001G226700 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic008G046600 Sobic008G046600 Sobic003G361500--Sobic008G046600 Sobic006G109300 Sobic006G109300 Sobic003G361500--Sobic006G109300 Sobic001G294700 Sobic001G294700 Sobic003G361500--Sobic001G294700 Sobic004G319300 Sobic004G319300 Sobic003G361500--Sobic004G319300 Sobic009G252800 Sobic009G252800 Sobic003G361500--Sobic009G252800 Sobic004G059000 Sobic004G059000 Sobic003G361500--Sobic004G059000 Sobic007G152101 Sobic007G152101 Sobic003G361500--Sobic007G152101 Sobic003G361500--Sobic008G142700 Sobic006G207500 Sobic006G207500 Sobic003G361500--Sobic006G207500 Sobic002G313500 Sobic002G313500 Sobic008G139700--Sobic002G313500 Sobic010G017800 Sobic010G017800 Sobic008G139700--Sobic010G017800 Sobic001G080000 Sobic001G080000 Sobic008G139700--Sobic001G080000 Sobic001G143500 Sobic001G143500 Sobic008G139700--Sobic001G143500 Sobic002G180000 Sobic002G180000 Sobic008G139700--Sobic002G180000 Sobic003G045400 Sobic003G045400 Sobic008G139700--Sobic003G045400 Sobic007G205000 Sobic007G205000 Sobic008G139700--Sobic007G205000 Sobic006G267300 Sobic006G267300 Sobic008G139700--Sobic006G267300 Sobic010G105600 Sobic010G105600 Sobic008G139700--Sobic010G105600
Octagon: transcription factors


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