Gene annotation
Transcriptome id Sobic.001G154500.2,Sobic.001G154500.1
Synonym Sb01g013430, NF-YA6, Nuclear Factor Y, SbNF-YA1
Functional annotation tentative name (PubMedID : 31536532)
nuclear transcription factor Y subunit, putative, expressed
UniProt A0A1B6QJ65 , A0A1Z5S5R3
Pfam PF02045
Panther DB PTHR12632 PTHR12632:SF9
NCBI CDD -
KEGG Orthology K08064; NFYA, nuclear transcription factor Y, alpha
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G14020 : nuclear factor Y, subunit A6
RAP-DB (Rice) LOC_Os03g44540.1,LOC_Os12g42400.2 : nuclear transcription factor Y subunit, putative, expressed
MaizeGDB (Corn) Zm00025a017247 , Zm00025a007247
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G425800 src homology-3 domain protein 3, putative, expressed -
2 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
3 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
4 Sobic.010G076300 - -
5 Sobic.010G223700 MYB transcription factor, putative, expressed -
6 Sobic.001G226700 WD repeat-containing protein, putative, expressed -
7 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
8 Sobic.010G068500 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
9 Sobic.002G110300 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@UBX domain-containing protein, putative, expressed -
10 Sobic.003G035100 no apical meristem protein, putative, expressed -
11 Sobic.009G066900 DnaK family protein, putative, expressed K09489: heat shock 70kDa protein 4
12 Sobic.009G108700 -(PubMedID : 26976818)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
13 Sobic.006G119800 leucine rich repeat containing protein, expressed -
14 Sobic.001G262700 hhH-GPD superfamily base excision DNA repair protein, putative, expressed -
15 Sobic.006G184500 RING-H2 finger protein, putative, expressed -
16 Sobic.001G262900 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K10801: methyl-CpG-binding domain protein 4
17 Sobic.001G110900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
19 Sobic.002G400200 CS domain containing protein, putative, expressed -
20 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3


Gene co-expression network
sample Sobic001G154500 Sobic001G154500 Sobic001G425800 Sobic001G425800 Sobic001G154500--Sobic001G425800 Sobic002G134600 Sobic002G134600 Sobic001G154500--Sobic002G134600 Sobic007G006900 Sobic007G006900 Sobic001G154500--Sobic007G006900 Sobic010G076300 Sobic010G076300 Sobic001G154500--Sobic010G076300 Sobic010G223700 Sobic010G223700 Sobic001G154500--Sobic010G223700 Sobic001G226700 Sobic001G226700 Sobic001G154500--Sobic001G226700 Sobic003G309200 Sobic003G309200 Sobic001G154500--Sobic003G309200 Sobic010G068500 Sobic010G068500 Sobic001G154500--Sobic010G068500 Sobic002G110300 Sobic002G110300 Sobic001G154500--Sobic002G110300 Sobic001G425800--Sobic002G134600 Sobic001G425800--Sobic010G223700 Sobic001G425800--Sobic007G006900 Sobic008G046500 Sobic008G046500 Sobic001G425800--Sobic008G046500 Sobic010G249100 Sobic010G249100 Sobic001G425800--Sobic010G249100 Sobic001G425800--Sobic001G226700 Sobic002G257200 Sobic002G257200 Sobic001G425800--Sobic002G257200 Sobic004G146800 Sobic004G146800 Sobic001G425800--Sobic004G146800 Sobic008G124900 Sobic008G124900 Sobic001G425800--Sobic008G124900 Sobic002G134600--Sobic003G309200 Sobic002G134600--Sobic007G006900 Sobic002G134600--Sobic001G226700 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic001G362200 Sobic001G362200 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic002G134600--Sobic010G076300 Sobic007G006900--Sobic002G134600 Sobic007G006900--Sobic001G425800 Sobic003G328600 Sobic003G328600 Sobic007G006900--Sobic003G328600 Sobic007G006900--Sobic001G362200 Sobic002G400200 Sobic002G400200 Sobic007G006900--Sobic002G400200 Sobic007G006900--Sobic010G249100 Sobic002G067600 Sobic002G067600 Sobic007G006900--Sobic002G067600 Sobic009G238850 Sobic009G238850 Sobic007G006900--Sobic009G238850 Sobic003G119800 Sobic003G119800 Sobic007G006900--Sobic003G119800 Sobic001G191600 Sobic001G191600 Sobic010G076300--Sobic001G191600 Sobic010G076300--Sobic002G134600 Sobic010G076300--Sobic010G223700 Sobic010G076300--Sobic001G226700 Sobic003G109700 Sobic003G109700 Sobic010G076300--Sobic003G109700 Sobic009G103600 Sobic009G103600 Sobic010G076300--Sobic009G103600 Sobic001G222250 Sobic001G222250 Sobic010G076300--Sobic001G222250 Sobic001G298600 Sobic001G298600 Sobic010G076300--Sobic001G298600 Sobic010G076300--Sobic002G294800 Sobic010G223700--Sobic003G309200 Sobic003G221900 Sobic003G221900 Sobic010G223700--Sobic003G221900 Sobic010G223700--Sobic001G122832 Sobic010G025300 Sobic010G025300 Sobic010G223700--Sobic010G025300 Sobic010G223700--Sobic001G425800 Sobic001G389100 Sobic001G389100 Sobic010G223700--Sobic001G389100 Sobic004G117900 Sobic004G117900 Sobic010G223700--Sobic004G117900 Sobic003G411900 Sobic003G411900 Sobic010G223700--Sobic003G411900 Sobic003G131400 Sobic003G131400 Sobic010G223700--Sobic003G131400 Sobic001G226700--Sobic002G294800 Sobic001G226700--Sobic002G134600 Sobic010G265300 Sobic010G265300 Sobic001G226700--Sobic010G265300 Sobic001G226700--Sobic001G362200 Sobic001G226700--Sobic008G046500 Sobic007G165900 Sobic007G165900 Sobic001G226700--Sobic007G165900 Sobic004G246900 Sobic004G246900 Sobic001G226700--Sobic004G246900 Sobic006G032900 Sobic006G032900 Sobic001G226700--Sobic006G032900 Sobic010G143800 Sobic010G143800 Sobic001G226700--Sobic010G143800 Sobic003G309200--Sobic010G223700 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic003G309200--Sobic008G124900 Sobic003G309200--Sobic003G221900 Sobic006G033200 Sobic006G033200 Sobic003G309200--Sobic006G033200 Sobic002G383600 Sobic002G383600 Sobic003G309200--Sobic002G383600 Sobic010G130000 Sobic010G130000 Sobic003G309200--Sobic010G130000 Sobic003G309200--Sobic001G389100 Sobic010G068500--Sobic009G219000 Sobic006G119800 Sobic006G119800 Sobic010G068500--Sobic006G119800 Sobic010G068500--Sobic002G134600 Sobic010G068500--Sobic003G309200 Sobic003G010400 Sobic003G010400 Sobic010G068500--Sobic003G010400 Sobic006G225600 Sobic006G225600 Sobic010G068500--Sobic006G225600 Sobic001G162100 Sobic001G162100 Sobic010G068500--Sobic001G162100 Sobic010G068500--Sobic001G425800 Sobic001G516100 Sobic001G516100 Sobic010G068500--Sobic001G516100 Sobic007G037301 Sobic007G037301 Sobic002G110300--Sobic007G037301 Sobic001G095500 Sobic001G095500 Sobic002G110300--Sobic001G095500 Sobic009G183000 Sobic009G183000 Sobic002G110300--Sobic009G183000 Sobic010G089100 Sobic010G089100 Sobic002G110300--Sobic010G089100 Sobic001G083800 Sobic001G083800 Sobic002G110300--Sobic001G083800 Sobic004G226600 Sobic004G226600 Sobic002G110300--Sobic004G226600 Sobic002G110300--Sobic003G119800 Sobic002G110300--Sobic007G006900 Sobic002G110300--Sobic002G134600
Octagon: transcription factors


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