Gene annotation
Transcriptome id Sobic.010G068500.2,Sobic.010G068500.1
Synonym Sb10g005970, ATCNGC17, CNGC17
Functional annotation cyclic nucleotide-gated ion channel 14, putative, expressed
UniProt A0A194YIT0 , C5Z5V7
Pfam PF00027 PF00520
Panther DB PTHR10217 PTHR10217:SF531
NCBI CDD -
KEGG Orthology K05391; cyclic nucleotide gated channel, plant
Gene Ontology GO:0016020; membrane GO:0006811ion transport GO:0005216ion channel activity


Orthologs (automatic annotation)
TAIR AT4G30360 : cyclic nucleotide-gated channel 17
RAP-DB (Rice) LOC_Os06g08850.1 : cyclic nucleotide-gated ion channel 14, putative, expressed
MaizeGDB (Corn) Zm00025a049725
Brachypodium KQK19207
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
2 Sobic.006G119800 leucine rich repeat containing protein, expressed -
3 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
4 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
5 Sobic.003G010400 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
6 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
7 Sobic.001G162100 WRKY94, expressed -
8 Sobic.001G425800 src homology-3 domain protein 3, putative, expressed -
9 Sobic.001G516100 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
10 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
11 Sobic.003G407200 calmodulin-binding transcription activator, putative, expressed -
12 Sobic.007G019800 expressed protein -
13 Sobic.003G076500 MYB family transcription factor, putative, expressed -
14 Sobic.001G541100 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
15 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
16 Sobic.006G209400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
17 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
18 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
19 Sobic.008G189400 NBS-LRR disease resistance protein, putative, expressed -
20 Sobic.001G015800 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'


Gene co-expression network
sample Sobic010G068500 Sobic010G068500 Sobic009G219000 Sobic009G219000 Sobic010G068500--Sobic009G219000 Sobic006G119800 Sobic006G119800 Sobic010G068500--Sobic006G119800 Sobic002G134600 Sobic002G134600 Sobic010G068500--Sobic002G134600 Sobic003G309200 Sobic003G309200 Sobic010G068500--Sobic003G309200 Sobic003G010400 Sobic003G010400 Sobic010G068500--Sobic003G010400 Sobic006G225600 Sobic006G225600 Sobic010G068500--Sobic006G225600 Sobic001G162100 Sobic001G162100 Sobic010G068500--Sobic001G162100 Sobic001G425800 Sobic001G425800 Sobic010G068500--Sobic001G425800 Sobic001G516100 Sobic001G516100 Sobic010G068500--Sobic001G516100 Sobic001G541100 Sobic001G541100 Sobic009G219000--Sobic001G541100 Sobic001G323000 Sobic001G323000 Sobic009G219000--Sobic001G323000 Sobic001G261456 Sobic001G261456 Sobic009G219000--Sobic001G261456 Sobic008G046500 Sobic008G046500 Sobic009G219000--Sobic008G046500 Sobic001G466700 Sobic001G466700 Sobic009G219000--Sobic001G466700 Sobic004G274400 Sobic004G274400 Sobic009G219000--Sobic004G274400 Sobic009G138100 Sobic009G138100 Sobic009G219000--Sobic009G138100 Sobic001G105500 Sobic001G105500 Sobic009G219000--Sobic001G105500 Sobic001G371200 Sobic001G371200 Sobic009G219000--Sobic001G371200 Sobic001G281600 Sobic001G281600 Sobic006G119800--Sobic001G281600 Sobic001G387600 Sobic001G387600 Sobic006G119800--Sobic001G387600 Sobic004G121100 Sobic004G121100 Sobic006G119800--Sobic004G121100 Sobic007G019800 Sobic007G019800 Sobic006G119800--Sobic007G019800 Sobic006G273200 Sobic006G273200 Sobic006G119800--Sobic006G273200 Sobic006G119800--Sobic010G068500 Sobic004G301900 Sobic004G301900 Sobic006G119800--Sobic004G301900 Sobic004G119100 Sobic004G119100 Sobic006G119800--Sobic004G119100 Sobic009G233300 Sobic009G233300 Sobic006G119800--Sobic009G233300 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic001G226700 Sobic001G226700 Sobic002G134600--Sobic001G226700 Sobic002G134600--Sobic001G425800 Sobic002G294800 Sobic002G294800 Sobic002G134600--Sobic002G294800 Sobic001G362200 Sobic001G362200 Sobic002G134600--Sobic001G362200 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic010G223700 Sobic010G223700 Sobic003G309200--Sobic010G223700 Sobic003G309200--Sobic002G134600 Sobic001G262700 Sobic001G262700 Sobic003G309200--Sobic001G262700 Sobic008G124900 Sobic008G124900 Sobic003G309200--Sobic008G124900 Sobic003G221900 Sobic003G221900 Sobic003G309200--Sobic003G221900 Sobic006G033200 Sobic006G033200 Sobic003G309200--Sobic006G033200 Sobic002G383600 Sobic002G383600 Sobic003G309200--Sobic002G383600 Sobic010G130000 Sobic010G130000 Sobic003G309200--Sobic010G130000 Sobic001G389100 Sobic001G389100 Sobic003G309200--Sobic001G389100 Sobic002G161800 Sobic002G161800 Sobic003G010400--Sobic002G161800 Sobic003G010400--Sobic008G046500 Sobic003G264200 Sobic003G264200 Sobic003G010400--Sobic003G264200 Sobic010G251000 Sobic010G251000 Sobic003G010400--Sobic010G251000 Sobic003G010400--Sobic007G019800 Sobic009G005900 Sobic009G005900 Sobic003G010400--Sobic009G005900 Sobic003G010400--Sobic010G068500 Sobic001G080700 Sobic001G080700 Sobic003G010400--Sobic001G080700 Sobic001G007000 Sobic001G007000 Sobic003G010400--Sobic001G007000 Sobic004G234900 Sobic004G234900 Sobic006G225600--Sobic004G234900 Sobic002G251700 Sobic002G251700 Sobic006G225600--Sobic002G251700 Sobic006G225600--Sobic001G162100 Sobic001G098200 Sobic001G098200 Sobic006G225600--Sobic001G098200 Sobic003G295400 Sobic003G295400 Sobic006G225600--Sobic003G295400 Sobic002G122700 Sobic002G122700 Sobic006G225600--Sobic002G122700 Sobic006G225600--Sobic004G274400 Sobic001G051200 Sobic001G051200 Sobic006G225600--Sobic001G051200 Sobic001G434900 Sobic001G434900 Sobic006G225600--Sobic001G434900 Sobic001G162100--Sobic006G225600 Sobic001G162100--Sobic004G234900 Sobic009G059700 Sobic009G059700 Sobic001G162100--Sobic009G059700 Sobic008G016900 Sobic008G016900 Sobic001G162100--Sobic008G016900 Sobic010G062800 Sobic010G062800 Sobic001G162100--Sobic010G062800 Sobic001G162100--Sobic002G122700 Sobic001G162100--Sobic001G434900 Sobic001G162100--Sobic001G098200 Sobic009G219900 Sobic009G219900 Sobic001G162100--Sobic009G219900 Sobic001G425800--Sobic002G134600 Sobic001G425800--Sobic010G223700 Sobic001G425800--Sobic007G006900 Sobic001G425800--Sobic008G046500 Sobic010G249100 Sobic010G249100 Sobic001G425800--Sobic010G249100 Sobic001G425800--Sobic001G226700 Sobic002G257200 Sobic002G257200 Sobic001G425800--Sobic002G257200 Sobic004G146800 Sobic004G146800 Sobic001G425800--Sobic004G146800 Sobic001G425800--Sobic008G124900 Sobic004G031600 Sobic004G031600 Sobic001G516100--Sobic004G031600 Sobic001G103200 Sobic001G103200 Sobic001G516100--Sobic001G103200 Sobic003G367300 Sobic003G367300 Sobic001G516100--Sobic003G367300 Sobic004G271700 Sobic004G271700 Sobic001G516100--Sobic004G271700 Sobic002G330300 Sobic002G330300 Sobic001G516100--Sobic002G330300 Sobic002G293300 Sobic002G293300 Sobic001G516100--Sobic002G293300 Sobic001G516100--Sobic001G541100 Sobic003G002400 Sobic003G002400 Sobic001G516100--Sobic003G002400 Sobic001G516100--Sobic004G274400
Octagon: transcription factors


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