Gene annotation
Transcriptome id Sobic.007G134600.4,Sobic.007G134600.1,Sobic.007G134600.3,Sobic.007G134600.5
Synonym Sb07g021050
Functional annotation agenet domain containing protein, expressed
UniProt C5YL61 , A0A1Z5R9V4 , A0A1B6PHN7
Pfam PF01426 PF05641
Panther DB PTHR31917 PTHR31917:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003682; chromatin binding


Orthologs (automatic annotation)
TAIR AT1G68580 : agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein
RAP-DB (Rice) LOC_Os08g33420.1 : agenet domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052236 , Zm00025a037061 , Zm00025a005975 , Zm00025a022327 , Zm00025a052414 , Zm00025a012929 , Zm00025a031109 , Zm00025a041424 , Zm00025a055696
Brachypodium KQJ98369 , KQJ98370
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G134600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G310200 expressed protein -
2 Sobic.009G215800 OsFBX173 - F-box domain containing protein, expressed -
3 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
4 Sobic.010G056000 GAGA-binding protein, putative, expressed -
5 Sobic.001G351700 calmodulin-binding transcription activator, putative, expressed -
6 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
7 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
8 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
9 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
10 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
11 Sobic.004G267300 bg55, putative, expressed -
12 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
13 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
14 Sobic.007G096000 expressed protein -
15 Sobic.006G258500 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
16 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
17 Sobic.004G205600 bromodomain domain containing protein, expressed -
18 Sobic.001G315100 TKL_IRAK_CrRLK1L-1.16 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
19 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
20 Sobic.003G176600 expressed protein -


Gene co-expression network
sample Sobic007G134600 Sobic007G134600 Sobic002G310200 Sobic002G310200 Sobic007G134600--Sobic002G310200 Sobic009G215800 Sobic009G215800 Sobic007G134600--Sobic009G215800 Sobic006G237400 Sobic006G237400 Sobic007G134600--Sobic006G237400 Sobic010G056000 Sobic010G056000 Sobic007G134600--Sobic010G056000 Sobic001G351700 Sobic001G351700 Sobic007G134600--Sobic001G351700 Sobic001G222500 Sobic001G222500 Sobic007G134600--Sobic001G222500 Sobic002G157300 Sobic002G157300 Sobic007G134600--Sobic002G157300 Sobic006G273200 Sobic006G273200 Sobic007G134600--Sobic006G273200 Sobic008G067600 Sobic008G067600 Sobic007G134600--Sobic008G067600 Sobic002G310200--Sobic001G222500 Sobic008G047800 Sobic008G047800 Sobic002G310200--Sobic008G047800 Sobic007G217000 Sobic007G217000 Sobic002G310200--Sobic007G217000 Sobic004G084300 Sobic004G084300 Sobic002G310200--Sobic004G084300 Sobic007G096000 Sobic007G096000 Sobic002G310200--Sobic007G096000 Sobic010G101800 Sobic010G101800 Sobic002G310200--Sobic010G101800 Sobic003G443100 Sobic003G443100 Sobic002G310200--Sobic003G443100 Sobic002G310200--Sobic008G067600 Sobic004G067700 Sobic004G067700 Sobic002G310200--Sobic004G067700 Sobic009G065100 Sobic009G065100 Sobic009G215800--Sobic009G065100 Sobic009G215800--Sobic004G084300 Sobic008G136200 Sobic008G136200 Sobic009G215800--Sobic008G136200 Sobic001G281600 Sobic001G281600 Sobic009G215800--Sobic001G281600 Sobic009G215800--Sobic001G222500 Sobic001G107500 Sobic001G107500 Sobic009G215800--Sobic001G107500 Sobic003G084700 Sobic003G084700 Sobic009G215800--Sobic003G084700 Sobic001G407200 Sobic001G407200 Sobic009G215800--Sobic001G407200 Sobic009G215800--Sobic008G067600 Sobic001G497300 Sobic001G497300 Sobic006G237400--Sobic001G497300 Sobic006G237400--Sobic008G047800 Sobic003G029700 Sobic003G029700 Sobic006G237400--Sobic003G029700 Sobic009G249200 Sobic009G249200 Sobic006G237400--Sobic009G249200 Sobic006G237400--Sobic007G217000 Sobic001G253700 Sobic001G253700 Sobic006G237400--Sobic001G253700 Sobic006G237400--Sobic002G310200 Sobic001G474600 Sobic001G474600 Sobic006G237400--Sobic001G474600 Sobic001G220300 Sobic001G220300 Sobic006G237400--Sobic001G220300 Sobic001G111900 Sobic001G111900 Sobic010G056000--Sobic001G111900 Sobic003G084900 Sobic003G084900 Sobic010G056000--Sobic003G084900 Sobic010G028800 Sobic010G028800 Sobic010G056000--Sobic010G028800 Sobic009G127900 Sobic009G127900 Sobic010G056000--Sobic009G127900 Sobic003G087400 Sobic003G087400 Sobic010G056000--Sobic003G087400 Sobic003G187400 Sobic003G187400 Sobic010G056000--Sobic003G187400 Sobic005G077466 Sobic005G077466 Sobic010G056000--Sobic005G077466 Sobic001G094000 Sobic001G094000 Sobic010G056000--Sobic001G094000 Sobic010G056000--Sobic002G157300 Sobic001G351700--Sobic007G134600 Sobic004G267300 Sobic004G267300 Sobic001G351700--Sobic004G267300 Sobic001G290200 Sobic001G290200 Sobic001G351700--Sobic001G290200 Sobic004G021100 Sobic004G021100 Sobic001G351700--Sobic004G021100 Sobic009G056800 Sobic009G056800 Sobic001G351700--Sobic009G056800 Sobic001G306000 Sobic001G306000 Sobic001G351700--Sobic001G306000 Sobic003G433100 Sobic003G433100 Sobic001G351700--Sobic003G433100 Sobic009G172400 Sobic009G172400 Sobic001G351700--Sobic009G172400 Sobic001G371200 Sobic001G371200 Sobic001G351700--Sobic001G371200 Sobic001G222500--Sobic004G084300 Sobic001G222500--Sobic008G047800 Sobic001G155000 Sobic001G155000 Sobic001G222500--Sobic001G155000 Sobic001G222500--Sobic002G310200 Sobic009G126400 Sobic009G126400 Sobic001G222500--Sobic009G126400 Sobic009G040600 Sobic009G040600 Sobic001G222500--Sobic009G040600 Sobic002G006900 Sobic002G006900 Sobic001G222500--Sobic002G006900 Sobic003G052200 Sobic003G052200 Sobic001G222500--Sobic003G052200 Sobic001G222500--Sobic007G096000 Sobic010G026400 Sobic010G026400 Sobic002G157300--Sobic010G026400 Sobic002G157300--Sobic003G187400 Sobic007G011400 Sobic007G011400 Sobic002G157300--Sobic007G011400 Sobic005G149500 Sobic005G149500 Sobic002G157300--Sobic005G149500 Sobic002G157300--Sobic001G094000 Sobic010G260500 Sobic010G260500 Sobic002G157300--Sobic010G260500 Sobic007G185900 Sobic007G185900 Sobic002G157300--Sobic007G185900 Sobic010G263800 Sobic010G263800 Sobic002G157300--Sobic010G263800 Sobic006G173100 Sobic006G173100 Sobic002G157300--Sobic006G173100 Sobic006G273200--Sobic001G497300 Sobic006G273200--Sobic009G065100 Sobic004G205600 Sobic004G205600 Sobic006G273200--Sobic004G205600 Sobic006G273200--Sobic007G096000 Sobic009G233300 Sobic009G233300 Sobic006G273200--Sobic009G233300 Sobic008G062000 Sobic008G062000 Sobic006G273200--Sobic008G062000 Sobic006G273200--Sobic006G237400 Sobic007G205800 Sobic007G205800 Sobic006G273200--Sobic007G205800 Sobic003G176600 Sobic003G176600 Sobic006G273200--Sobic003G176600 Sobic001G090400 Sobic001G090400 Sobic008G067600--Sobic001G090400 Sobic003G445400 Sobic003G445400 Sobic008G067600--Sobic003G445400 Sobic008G067600--Sobic004G084300 Sobic008G067600--Sobic002G157300 Sobic001G315100 Sobic001G315100 Sobic008G067600--Sobic001G315100 Sobic001G512700 Sobic001G512700 Sobic008G067600--Sobic001G512700 Sobic009G000500 Sobic009G000500 Sobic008G067600--Sobic009G000500 Sobic004G057400 Sobic004G057400 Sobic008G067600--Sobic004G057400 Sobic008G067600--Sobic008G047800
Octagon: transcription factors


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