Gene annotation
Transcriptome id Sobic.004G028600.1,Sobic.004G028600.3,Sobic.004G028600.2
Synonym Sb04g002520
Functional annotation receptor-like protein kinase 5 precursor, putative, expressed
UniProt A0A1Z5RKM5 , C5XTT4 , A0A1Z5RL50
Pfam PF00069 PF07714
Panther DB PTHR27000 PTHR27000:SF155 PTHR27000 PTHR27000:SF78
NCBI CDD KOG1187; Serine/threonine protein kinase KOG3087Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G25930 : Protein kinase family protein with leucine-rich repeat domain,Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os02g13430.1,LOC_Os06g36270.2 : receptor-like protein kinase 5 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020124 , Zm00025a025101 , Zm00025a051047 , Zm00025a000606 , Zm00025a042309
Brachypodium PNT66774 , KQJ95380 , KQJ94124 , KQJ85665 , KQJ95378
Barley HORVU5Hr1G001920.3 , HORVU5Hr1G001920.2 , HORVU5Hr1G001920.1
Wheat TraesCSU02G256100 , TraesCSU02G256200 , TraesCS7D02G365800 , TraesCS7A02G356900 , TraesCS7A02G013100 , TraesCS4A02G483000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
2 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
3 Sobic.007G085001 - K02937: RP-L7e, large subunit ribosomal protein L7e
4 Sobic.001G469500 transporter family protein, putative, expressed -
5 Sobic.002G249200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin efflux carrier component, putative, expressed -
6 Sobic.001G190300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@loricrin, putative, expressed -
7 Sobic.004G068800 cytochrome P450 71D10, putative, expressed -
8 Sobic.007G092700 - -
9 Sobic.004G281300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
10 Sobic.002G373100 strictosidine synthase, putative, expressed -
11 Sobic.008G027200 rp1, putative, expressed -
12 Sobic.002G301800 GRAS family transcription factor domain containing protein, expressed -
13 Sobic.003G413500 expressed protein -
14 Sobic.005G210000 expressed protein K11968: ariadne-1
15 Sobic.008G187800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GCRP4 - Glycine and cysteine rich family protein precursor, expressed -
16 Sobic.007G135000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
17 Sobic.005G209500 expressed protein -
18 Sobic.006G258800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
19 Sobic.001G488700 sucrose transporter 2(PubMedID : 26465154)@sucrose transporter 2(PubMedID : 26465154)@sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
20 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase


Gene co-expression network
sample Sobic004G028600 Sobic004G028600 Sobic003G363100 Sobic003G363100 Sobic004G028600--Sobic003G363100 Sobic010G089700 Sobic010G089700 Sobic004G028600--Sobic010G089700 Sobic007G085001 Sobic007G085001 Sobic004G028600--Sobic007G085001 Sobic001G469500 Sobic001G469500 Sobic004G028600--Sobic001G469500 Sobic002G249200 Sobic002G249200 Sobic004G028600--Sobic002G249200 Sobic001G190300 Sobic001G190300 Sobic004G028600--Sobic001G190300 Sobic004G068800 Sobic004G068800 Sobic004G028600--Sobic004G068800 Sobic007G092700 Sobic007G092700 Sobic004G028600--Sobic007G092700 Sobic004G281300 Sobic004G281300 Sobic004G028600--Sobic004G281300 Sobic003G363100--Sobic001G469500 Sobic005G217200 Sobic005G217200 Sobic003G363100--Sobic005G217200 Sobic010G018100 Sobic010G018100 Sobic003G363100--Sobic010G018100 Sobic009G000200 Sobic009G000200 Sobic003G363100--Sobic009G000200 Sobic008G189200 Sobic008G189200 Sobic003G363100--Sobic008G189200 Sobic007G135000 Sobic007G135000 Sobic003G363100--Sobic007G135000 Sobic003G363100--Sobic004G028600 Sobic002G274800 Sobic002G274800 Sobic003G363100--Sobic002G274800 Sobic003G276000 Sobic003G276000 Sobic003G363100--Sobic003G276000 Sobic009G028500 Sobic009G028500 Sobic010G089700--Sobic009G028500 Sobic010G089700--Sobic004G281300 Sobic004G006500 Sobic004G006500 Sobic010G089700--Sobic004G006500 Sobic004G092000 Sobic004G092000 Sobic010G089700--Sobic004G092000 Sobic009G032400 Sobic009G032400 Sobic010G089700--Sobic009G032400 Sobic002G137800 Sobic002G137800 Sobic010G089700--Sobic002G137800 Sobic002G418900 Sobic002G418900 Sobic010G089700--Sobic002G418900 Sobic001G095750 Sobic001G095750 Sobic010G089700--Sobic001G095750 Sobic007G124100 Sobic007G124100 Sobic010G089700--Sobic007G124100 Sobic001G236400 Sobic001G236400 Sobic007G085001--Sobic001G236400 Sobic010G262500 Sobic010G262500 Sobic007G085001--Sobic010G262500 Sobic002G119700 Sobic002G119700 Sobic007G085001--Sobic002G119700 Sobic007G085001--Sobic004G028600 Sobic003G112800 Sobic003G112800 Sobic007G085001--Sobic003G112800 Sobic005G209500 Sobic005G209500 Sobic007G085001--Sobic005G209500 Sobic006G056800 Sobic006G056800 Sobic007G085001--Sobic006G056800 Sobic003G252400 Sobic003G252400 Sobic007G085001--Sobic003G252400 Sobic006G258800 Sobic006G258800 Sobic007G085001--Sobic006G258800 Sobic001G469500--Sobic007G135000 Sobic010G044700 Sobic010G044700 Sobic001G469500--Sobic010G044700 Sobic001G469500--Sobic003G363100 Sobic010G192800 Sobic010G192800 Sobic001G469500--Sobic010G192800 Sobic003G022600 Sobic003G022600 Sobic001G469500--Sobic003G022600 Sobic003G039700 Sobic003G039700 Sobic001G469500--Sobic003G039700 Sobic003G097100 Sobic003G097100 Sobic001G469500--Sobic003G097100 Sobic002G130000 Sobic002G130000 Sobic001G469500--Sobic002G130000 Sobic008G009200 Sobic008G009200 Sobic001G469500--Sobic008G009200 Sobic002G266000 Sobic002G266000 Sobic002G249200--Sobic002G266000 Sobic001G282600 Sobic001G282600 Sobic002G249200--Sobic001G282600 Sobic009G161000 Sobic009G161000 Sobic002G249200--Sobic009G161000 Sobic002G249200--Sobic002G274800 Sobic001G504900 Sobic001G504900 Sobic002G249200--Sobic001G504900 Sobic005G178100 Sobic005G178100 Sobic002G249200--Sobic005G178100 Sobic010G203200 Sobic010G203200 Sobic002G249200--Sobic010G203200 Sobic007G225900 Sobic007G225900 Sobic002G249200--Sobic007G225900 Sobic004G124200 Sobic004G124200 Sobic002G249200--Sobic004G124200 Sobic004G059300 Sobic004G059300 Sobic001G190300--Sobic004G059300 Sobic007G034000 Sobic007G034000 Sobic001G190300--Sobic007G034000 Sobic001G190300--Sobic007G092700 Sobic006G082000 Sobic006G082000 Sobic001G190300--Sobic006G082000 Sobic006G143000 Sobic006G143000 Sobic001G190300--Sobic006G143000 Sobic001G190300--Sobic004G028600 Sobic008G074400 Sobic008G074400 Sobic001G190300--Sobic008G074400 Sobic009G016600 Sobic009G016600 Sobic001G190300--Sobic009G016600 Sobic009G226600 Sobic009G226600 Sobic001G190300--Sobic009G226600 Sobic005G045200 Sobic005G045200 Sobic004G068800--Sobic005G045200 Sobic002G366100 Sobic002G366100 Sobic004G068800--Sobic002G366100 Sobic001G121100 Sobic001G121100 Sobic004G068800--Sobic001G121100 Sobic002G273700 Sobic002G273700 Sobic004G068800--Sobic002G273700 Sobic009G255100 Sobic009G255100 Sobic004G068800--Sobic009G255100 Sobic001G340700 Sobic001G340700 Sobic004G068800--Sobic001G340700 Sobic006G195100 Sobic006G195100 Sobic004G068800--Sobic006G195100 Sobic002G125900 Sobic002G125900 Sobic004G068800--Sobic002G125900 Sobic001G145050 Sobic001G145050 Sobic004G068800--Sobic001G145050 Sobic007G092700--Sobic007G034000 Sobic001G015500 Sobic001G015500 Sobic007G092700--Sobic001G015500 Sobic001G069900 Sobic001G069900 Sobic007G092700--Sobic001G069900 Sobic007G186200 Sobic007G186200 Sobic007G092700--Sobic007G186200 Sobic007G092700--Sobic008G189200 Sobic008G079300 Sobic008G079300 Sobic007G092700--Sobic008G079300 Sobic001G207400 Sobic001G207400 Sobic007G092700--Sobic001G207400 Sobic003G428400 Sobic003G428400 Sobic007G092700--Sobic003G428400 Sobic006G181300 Sobic006G181300 Sobic007G092700--Sobic006G181300 Sobic004G281300--Sobic010G089700 Sobic006G042200 Sobic006G042200 Sobic004G281300--Sobic006G042200 Sobic004G281300--Sobic009G028500 Sobic002G301800 Sobic002G301800 Sobic004G281300--Sobic002G301800 Sobic003G403500 Sobic003G403500 Sobic004G281300--Sobic003G403500 Sobic003G422700 Sobic003G422700 Sobic004G281300--Sobic003G422700 Sobic001G034300 Sobic001G034300 Sobic004G281300--Sobic001G034300 Sobic004G337500 Sobic004G337500 Sobic004G281300--Sobic004G337500 Sobic001G351100 Sobic001G351100 Sobic004G281300--Sobic001G351100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.