Gene annotation
Transcriptome id Sobic.005G210000.1
Synonym ATARI7, ARI7
Functional annotation expressed protein
UniProt C5Y7J0
Pfam PF01485
Panther DB PTHR11685 PTHR11685:SF131
NCBI CDD KOG1815; Predicted E3 ubiquitin ligase
KEGG Orthology K11968; ariadne-1
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT2G31510 : IBR domain-containing protein
RAP-DB (Rice) LOC_Os09g38630.1 : expressed protein
MaizeGDB (Corn) Zm00025a013708 , Zm00025a029172 , Zm00025a015947
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.005G210000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G070800 gamma-glutamyltranspeptidase 1 precursor, putative, expressed K18592: GGT1_5, gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase
2 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
3 Sobic.001G237000 lectin-like receptor kinase, putative, expressed -
4 Sobic.004G174900 - -
5 Sobic.009G000200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
6 Sobic.009G138200 inactive receptor kinase At1g27190 precursor, putative, expressed -
7 Sobic.003G370200 ion channel DMI1, chloroplast precursor, putative, expressed -
8 Sobic.003G233600 aspartyl aminopeptidase, putative, expressed K01267: aspartyl aminopeptidase
9 Sobic.001G381200 vacuolar-sorting receptor precursor, putative, expressed -
10 Sobic.003G263300 Protein kinase domain containing protein, expressed -
11 Sobic.002G301800 GRAS family transcription factor domain containing protein, expressed -
12 Sobic.002G155301 - -
13 Sobic.004G028600 receptor-like protein kinase 5 precursor, putative, expressed -
14 Sobic.003G086900 C2 domain containing protein, putative, expressed -
15 Sobic.002G073900 expressed protein -
16 Sobic.001G079200 STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
17 Sobic.002G119700 ankyrin repeat domain containing protein, expressed -
18 Sobic.009G016600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
20 Sobic.001G190300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@loricrin, putative, expressed -


Gene co-expression network
sample Sobic005G210000 Sobic005G210000 Sobic003G070800 Sobic003G070800 Sobic005G210000--Sobic003G070800 Sobic010G123400 Sobic010G123400 Sobic005G210000--Sobic010G123400 Sobic001G237000 Sobic001G237000 Sobic005G210000--Sobic001G237000 Sobic004G174900 Sobic004G174900 Sobic005G210000--Sobic004G174900 Sobic009G000200 Sobic009G000200 Sobic005G210000--Sobic009G000200 Sobic009G138200 Sobic009G138200 Sobic005G210000--Sobic009G138200 Sobic003G370200 Sobic003G370200 Sobic005G210000--Sobic003G370200 Sobic003G233600 Sobic003G233600 Sobic005G210000--Sobic003G233600 Sobic001G381200 Sobic001G381200 Sobic005G210000--Sobic001G381200 Sobic010G018100 Sobic010G018100 Sobic003G070800--Sobic010G018100 Sobic003G404200 Sobic003G404200 Sobic003G070800--Sobic003G404200 Sobic003G070800--Sobic005G210000 Sobic005G203800 Sobic005G203800 Sobic003G070800--Sobic005G203800 Sobic001G320200 Sobic001G320200 Sobic003G070800--Sobic001G320200 Sobic009G133600 Sobic009G133600 Sobic003G070800--Sobic009G133600 Sobic003G317400 Sobic003G317400 Sobic003G070800--Sobic003G317400 Sobic003G070800--Sobic009G000200 Sobic006G247100 Sobic006G247100 Sobic003G070800--Sobic006G247100 Sobic003G273600 Sobic003G273600 Sobic010G123400--Sobic003G273600 Sobic002G166300 Sobic002G166300 Sobic010G123400--Sobic002G166300 Sobic003G376400 Sobic003G376400 Sobic010G123400--Sobic003G376400 Sobic002G339500 Sobic002G339500 Sobic010G123400--Sobic002G339500 Sobic006G222100 Sobic006G222100 Sobic010G123400--Sobic006G222100 Sobic010G123400--Sobic003G233600 Sobic009G017400 Sobic009G017400 Sobic010G123400--Sobic009G017400 Sobic001G079200 Sobic001G079200 Sobic010G123400--Sobic001G079200 Sobic010G084000 Sobic010G084000 Sobic010G123400--Sobic010G084000 Sobic005G061033 Sobic005G061033 Sobic001G237000--Sobic005G061033 Sobic001G237000--Sobic005G210000 Sobic008G190900 Sobic008G190900 Sobic001G237000--Sobic008G190900 Sobic001G298500 Sobic001G298500 Sobic001G237000--Sobic001G298500 Sobic009G236300 Sobic009G236300 Sobic001G237000--Sobic009G236300 Sobic001G237000--Sobic009G000200 Sobic005G061000 Sobic005G061000 Sobic001G237000--Sobic005G061000 Sobic002G225300 Sobic002G225300 Sobic001G237000--Sobic002G225300 Sobic006G061300 Sobic006G061300 Sobic001G237000--Sobic006G061300 Sobic006G042200 Sobic006G042200 Sobic004G174900--Sobic006G042200 Sobic009G233300 Sobic009G233300 Sobic004G174900--Sobic009G233300 Sobic002G073900 Sobic002G073900 Sobic004G174900--Sobic002G073900 Sobic008G080200 Sobic008G080200 Sobic004G174900--Sobic008G080200 Sobic001G351100 Sobic001G351100 Sobic004G174900--Sobic001G351100 Sobic002G137800 Sobic002G137800 Sobic004G174900--Sobic002G137800 Sobic001G362200 Sobic001G362200 Sobic004G174900--Sobic001G362200 Sobic006G119800 Sobic006G119800 Sobic004G174900--Sobic006G119800 Sobic001G284800 Sobic001G284800 Sobic004G174900--Sobic001G284800 Sobic009G079300 Sobic009G079300 Sobic009G000200--Sobic009G079300 Sobic003G316300 Sobic003G316300 Sobic009G000200--Sobic003G316300 Sobic001G386400 Sobic001G386400 Sobic009G000200--Sobic001G386400 Sobic009G000200--Sobic001G298500 Sobic006G002600 Sobic006G002600 Sobic009G000200--Sobic006G002600 Sobic008G189200 Sobic008G189200 Sobic009G000200--Sobic008G189200 Sobic004G125900 Sobic004G125900 Sobic009G000200--Sobic004G125900 Sobic001G180900 Sobic001G180900 Sobic009G000200--Sobic001G180900 Sobic006G149600 Sobic006G149600 Sobic009G000200--Sobic006G149600 Sobic010G130000 Sobic010G130000 Sobic009G138200--Sobic010G130000 Sobic002G119700 Sobic002G119700 Sobic009G138200--Sobic002G119700 Sobic009G138100 Sobic009G138100 Sobic009G138200--Sobic009G138100 Sobic001G034300 Sobic001G034300 Sobic009G138200--Sobic001G034300 Sobic009G138200--Sobic001G180900 Sobic001G503300 Sobic001G503300 Sobic009G138200--Sobic001G503300 Sobic002G134600 Sobic002G134600 Sobic009G138200--Sobic002G134600 Sobic006G034000 Sobic006G034000 Sobic009G138200--Sobic006G034000 Sobic002G301800 Sobic002G301800 Sobic009G138200--Sobic002G301800 Sobic010G256800 Sobic010G256800 Sobic003G370200--Sobic010G256800 Sobic003G370200--Sobic010G084000 Sobic006G237400 Sobic006G237400 Sobic003G370200--Sobic006G237400 Sobic003G126600 Sobic003G126600 Sobic003G370200--Sobic003G126600 Sobic008G133400 Sobic008G133400 Sobic003G370200--Sobic008G133400 Sobic010G106900 Sobic010G106900 Sobic003G370200--Sobic010G106900 Sobic001G000200 Sobic001G000200 Sobic003G370200--Sobic001G000200 Sobic009G257800 Sobic009G257800 Sobic003G370200--Sobic009G257800 Sobic001G235900 Sobic001G235900 Sobic003G370200--Sobic001G235900 Sobic004G127700 Sobic004G127700 Sobic003G233600--Sobic004G127700 Sobic003G233600--Sobic002G166300 Sobic009G199200 Sobic009G199200 Sobic003G233600--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic003G233600--Sobic010G205800 Sobic003G233600--Sobic001G079200 Sobic003G233600--Sobic001G000200 Sobic004G296400 Sobic004G296400 Sobic003G233600--Sobic004G296400 Sobic003G233600--Sobic003G273600 Sobic004G136300 Sobic004G136300 Sobic003G233600--Sobic004G136300 Sobic003G229300 Sobic003G229300 Sobic001G381200--Sobic003G229300 Sobic010G196500 Sobic010G196500 Sobic001G381200--Sobic010G196500 Sobic003G343500 Sobic003G343500 Sobic001G381200--Sobic003G343500 Sobic002G193100 Sobic002G193100 Sobic001G381200--Sobic002G193100 Sobic001G500800 Sobic001G500800 Sobic001G381200--Sobic001G500800 Sobic003G086900 Sobic003G086900 Sobic001G381200--Sobic003G086900 Sobic004G169000 Sobic004G169000 Sobic001G381200--Sobic004G169000 Sobic001G476700 Sobic001G476700 Sobic001G381200--Sobic001G476700 Sobic004G118200 Sobic004G118200 Sobic001G381200--Sobic004G118200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.