Gene annotation
Transcriptome id Sobic.001G190300.1
Synonym Sb01g016740
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
loricrin, putative, expressed
UniProt A0A1Z5S6D2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g20040.1 : loricrin, putative, expressed
MaizeGDB (Corn) Zm00025a006258
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G190300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G059300 PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
2 Sobic.007G034000 expressed protein -
3 Sobic.007G092700 - -
4 Sobic.006G082000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSub41 - Putative Subtilisin homologue, expressed -
5 Sobic.006G143000 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
6 Sobic.004G028600 receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
8 Sobic.009G016600 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.009G226600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wax synthase, putative, expressed -
10 Sobic.001G359500 cytochrome P450, putative, expressed -
11 Sobic.005G210000 expressed protein K11968: ariadne-1
12 Sobic.003G010300 cytochrome P450, putative, expressed -
13 Sobic.003G109100 decarboxylase, putative, expressed K01634: SGPL1, sphinganine-1-phosphate aldolase
14 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
15 Sobic.002G130000 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
16 Sobic.004G063400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GDU1, putative, expressed -
17 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.004G226100 RIPER1 - Ripening-related family protein precursor, expressed -
19 Sobic.001G469500 transporter family protein, putative, expressed -
20 Sobic.007G084300 kelch repeat protein, putative, expressed -


Gene co-expression network
sample Sobic001G190300 Sobic001G190300 Sobic004G059300 Sobic004G059300 Sobic001G190300--Sobic004G059300 Sobic007G034000 Sobic007G034000 Sobic001G190300--Sobic007G034000 Sobic007G092700 Sobic007G092700 Sobic001G190300--Sobic007G092700 Sobic006G082000 Sobic006G082000 Sobic001G190300--Sobic006G082000 Sobic006G143000 Sobic006G143000 Sobic001G190300--Sobic006G143000 Sobic004G028600 Sobic004G028600 Sobic001G190300--Sobic004G028600 Sobic008G074400 Sobic008G074400 Sobic001G190300--Sobic008G074400 Sobic009G016600 Sobic009G016600 Sobic001G190300--Sobic009G016600 Sobic009G226600 Sobic009G226600 Sobic001G190300--Sobic009G226600 Sobic007G063300 Sobic007G063300 Sobic004G059300--Sobic007G063300 Sobic004G059300--Sobic006G143000 Sobic007G084300 Sobic007G084300 Sobic004G059300--Sobic007G084300 Sobic004G059300--Sobic001G190300 Sobic001G016700 Sobic001G016700 Sobic004G059300--Sobic001G016700 Sobic001G248300 Sobic001G248300 Sobic004G059300--Sobic001G248300 Sobic003G086900 Sobic003G086900 Sobic004G059300--Sobic003G086900 Sobic006G030600 Sobic006G030600 Sobic004G059300--Sobic006G030600 Sobic007G165600 Sobic007G165600 Sobic004G059300--Sobic007G165600 Sobic007G034000--Sobic007G092700 Sobic006G181300 Sobic006G181300 Sobic007G034000--Sobic006G181300 Sobic002G210800 Sobic002G210800 Sobic007G034000--Sobic002G210800 Sobic001G359500 Sobic001G359500 Sobic007G034000--Sobic001G359500 Sobic001G069900 Sobic001G069900 Sobic007G034000--Sobic001G069900 Sobic007G034000--Sobic006G082000 Sobic005G221000 Sobic005G221000 Sobic007G034000--Sobic005G221000 Sobic001G015500 Sobic001G015500 Sobic007G034000--Sobic001G015500 Sobic001G504900 Sobic001G504900 Sobic007G034000--Sobic001G504900 Sobic007G092700--Sobic007G034000 Sobic007G092700--Sobic001G015500 Sobic007G092700--Sobic001G069900 Sobic007G186200 Sobic007G186200 Sobic007G092700--Sobic007G186200 Sobic008G189200 Sobic008G189200 Sobic007G092700--Sobic008G189200 Sobic008G079300 Sobic008G079300 Sobic007G092700--Sobic008G079300 Sobic001G207400 Sobic001G207400 Sobic007G092700--Sobic001G207400 Sobic003G428400 Sobic003G428400 Sobic007G092700--Sobic003G428400 Sobic007G092700--Sobic006G181300 Sobic006G082000--Sobic007G034000 Sobic010G212350 Sobic010G212350 Sobic006G082000--Sobic010G212350 Sobic006G082000--Sobic006G181300 Sobic006G082000--Sobic001G190300 Sobic006G082000--Sobic005G221000 Sobic001G316400 Sobic001G316400 Sobic006G082000--Sobic001G316400 Sobic006G082000--Sobic002G210800 Sobic006G082000--Sobic007G092700 Sobic006G082000--Sobic008G074400 Sobic006G143000--Sobic007G084300 Sobic006G143000--Sobic009G016600 Sobic006G143000--Sobic003G086900 Sobic006G143000--Sobic006G030600 Sobic002G373100 Sobic002G373100 Sobic006G143000--Sobic002G373100 Sobic010G196500 Sobic010G196500 Sobic006G143000--Sobic010G196500 Sobic006G143000--Sobic007G063300 Sobic006G143000--Sobic004G059300 Sobic008G146900 Sobic008G146900 Sobic006G143000--Sobic008G146900 Sobic003G363100 Sobic003G363100 Sobic004G028600--Sobic003G363100 Sobic010G089700 Sobic010G089700 Sobic004G028600--Sobic010G089700 Sobic007G085001 Sobic007G085001 Sobic004G028600--Sobic007G085001 Sobic001G469500 Sobic001G469500 Sobic004G028600--Sobic001G469500 Sobic002G249200 Sobic002G249200 Sobic004G028600--Sobic002G249200 Sobic004G028600--Sobic001G190300 Sobic004G068800 Sobic004G068800 Sobic004G028600--Sobic004G068800 Sobic004G028600--Sobic007G092700 Sobic004G281300 Sobic004G281300 Sobic004G028600--Sobic004G281300 Sobic008G074400--Sobic001G316400 Sobic004G225100 Sobic004G225100 Sobic008G074400--Sobic004G225100 Sobic008G074400--Sobic001G069900 Sobic008G074400--Sobic006G181300 Sobic002G338100 Sobic002G338100 Sobic008G074400--Sobic002G338100 Sobic002G087800 Sobic002G087800 Sobic008G074400--Sobic002G087800 Sobic008G074400--Sobic001G359500 Sobic006G091700 Sobic006G091700 Sobic008G074400--Sobic006G091700 Sobic008G074400--Sobic001G504900 Sobic010G192800 Sobic010G192800 Sobic009G016600--Sobic010G192800 Sobic009G016600--Sobic007G084300 Sobic009G211000 Sobic009G211000 Sobic009G016600--Sobic009G211000 Sobic002G249300 Sobic002G249300 Sobic009G016600--Sobic002G249300 Sobic002G165140 Sobic002G165140 Sobic009G016600--Sobic002G165140 Sobic009G016600--Sobic006G143000 Sobic009G016600--Sobic007G063300 Sobic003G174301 Sobic003G174301 Sobic009G016600--Sobic003G174301 Sobic009G016600--Sobic009G226600 Sobic009G226600--Sobic008G079300 Sobic009G226600--Sobic002G087800 Sobic009G207600 Sobic009G207600 Sobic009G226600--Sobic009G207600 Sobic001G474500 Sobic001G474500 Sobic009G226600--Sobic001G474500 Sobic008G182700 Sobic008G182700 Sobic009G226600--Sobic008G182700 Sobic003G184900 Sobic003G184900 Sobic009G226600--Sobic003G184900 Sobic002G324000 Sobic002G324000 Sobic009G226600--Sobic002G324000 Sobic009G226600--Sobic006G181300 Sobic009G226600--Sobic001G359500
Octagon: transcription factors


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