Gene annotation
Transcriptome id Sobic.008G027200.1
Synonym Sb08g002390
Functional annotation rp1, putative, expressed
UniProt Q84YG0 , Q84YF7 , E0Y9Z6 , Q6UJG6
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF627
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os01g57340.1 : rp1, putative, expressed
MaizeGDB (Corn) Zm00025a053792 , Zm00025a053795 , Zm00025a053794 , Zm00025a053796 , Zm00025a053800
Brachypodium PNT72981 , KQK10078 , PNT72980
Barley HORVU7Hr1G001540.44 , HORVU7Hr1G001540.45 , HORVU7Hr1G001540.40 , HORVU7Hr1G001540.41 , HORVU7Hr1G001540.42 , HORVU7Hr1G001540.43 , HORVU3Hr1G076910.14 , HORVU3Hr1G076910.15 , HORVU3Hr1G076910.16 , HORVU3Hr1G076910.10 , HORVU3Hr1G076910.11 , HORVU3Hr1G076910.12 , HORVU3Hr1G076910.13 , HORVU3Hr1G076910.8 , HORVU3Hr1G076910.9 , HORVU3Hr1G076910.6 , HORVU3Hr1G076910.7 , HORVU3Hr1G076910.4 , HORVU3Hr1G076910.5 , HORVU3Hr1G076910.2 , HORVU3Hr1G076910.3 , HORVU3Hr1G076910.1 , HORVU7Hr1G001540.27 , HORVU7Hr1G001540.26 , HORVU7Hr1G001540.9 , HORVU7Hr1G001540.8 , HORVU7Hr1G001540.3 , HORVU7Hr1G001540.2 , HORVU7Hr1G001540.1 , HORVU7Hr1G001540.7 , HORVU7Hr1G001540.6 , HORVU7Hr1G001540.5 , HORVU7Hr1G001540.4 , HORVU7Hr1G001540.19 , HORVU7Hr1G001540.18 , HORVU7Hr1G001540.13 , HORVU7Hr1G001540.12 , HORVU7Hr1G001540.11 , HORVU7Hr1G001540.10 , HORVU7Hr1G001540.17 , HORVU7Hr1G001540.16 , HORVU7Hr1G001540.15 , HORVU7Hr1G001540.14 , HORVU7Hr1G001670.1 , HORVU7Hr1G001670.2 , HORVU7Hr1G001540.22 , HORVU7Hr1G001540.20 , HORVU7Hr1G001540.21 , HORVU7Hr1G001540.24 , HORVU7Hr1G001540.25 , HORVU7Hr1G001540.39 , HORVU7Hr1G001540.38 , HORVU7Hr1G001540.35 , HORVU7Hr1G001540.34 , HORVU7Hr1G001540.37 , HORVU7Hr1G001540.36 , HORVU7Hr1G001540.31 , HORVU7Hr1G001540.30 , HORVU7Hr1G001540.33 , HORVU7Hr1G001540.32 , HORVU7Hr1G001540.23 , HORVU7Hr1G001540.28 , HORVU7Hr1G001540.29
Wheat TraesCS3D02G314300 , TraesCS3D02G314300 , TraesCS3D02G314300 , TraesCS3D02G314300 , TraesCS4A02G475700 , TraesCS4A02G479700 , TraesCS1B02G400800 , TraesCS4A02G477300 , TraesCS7B02G490500 , TraesCS4A02G478800 , TraesCS4A02G479400 , TraesCS4A02G475900 , TraesCS4A02G475400 , TraesCS7D02G012900 , TraesCS4A02G480300
Populus -


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cDNA sequences
Sobic.008G027200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G373100 strictosidine synthase, putative, expressed -
2 Sobic.007G084300 kelch repeat protein, putative, expressed -
3 Sobic.002G072100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G080800 expressed protein -
5 Sobic.002G118101 - -
6 Sobic.005G045200 homeobox domain containing protein, expressed -
7 Sobic.006G060601 - -
8 Sobic.001G053200 expressed protein -
9 Sobic.001G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
10 Sobic.001G451700 cytochrome P450 protein, putative, expressed -
11 Sobic.001G205700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.009G082000 TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.001G413000 ABC transporter family protein, putative, expressed -
14 Sobic.001G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine protease 1 precursor, putative, expressed -
15 Sobic.003G039700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
16 Sobic.009G213800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
17 Sobic.009G019100 expressed protein K13473: chitin elicitor-binding protein
18 Sobic.010G196500 zinc-binding protein, putative, expressed -
19 Sobic.006G143000 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
20 Sobic.007G105400 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M


Gene co-expression network
sample Sobic008G027200 Sobic008G027200 Sobic002G373100 Sobic002G373100 Sobic008G027200--Sobic002G373100 Sobic007G084300 Sobic007G084300 Sobic008G027200--Sobic007G084300 Sobic002G072100 Sobic002G072100 Sobic008G027200--Sobic002G072100 Sobic003G080800 Sobic003G080800 Sobic008G027200--Sobic003G080800 Sobic002G118101 Sobic002G118101 Sobic008G027200--Sobic002G118101 Sobic005G045200 Sobic005G045200 Sobic008G027200--Sobic005G045200 Sobic006G060601 Sobic006G060601 Sobic008G027200--Sobic006G060601 Sobic001G053200 Sobic001G053200 Sobic008G027200--Sobic001G053200 Sobic001G275500 Sobic001G275500 Sobic008G027200--Sobic001G275500 Sobic002G373100--Sobic007G084300 Sobic002G373100--Sobic008G027200 Sobic006G143000 Sobic006G143000 Sobic002G373100--Sobic006G143000 Sobic003G086900 Sobic003G086900 Sobic002G373100--Sobic003G086900 Sobic010G196500 Sobic010G196500 Sobic002G373100--Sobic010G196500 Sobic006G213500 Sobic006G213500 Sobic002G373100--Sobic006G213500 Sobic002G273700 Sobic002G273700 Sobic002G373100--Sobic002G273700 Sobic009G082000 Sobic009G082000 Sobic002G373100--Sobic009G082000 Sobic003G308700 Sobic003G308700 Sobic002G373100--Sobic003G308700 Sobic006G030600 Sobic006G030600 Sobic007G084300--Sobic006G030600 Sobic007G084300--Sobic006G143000 Sobic007G084300--Sobic010G196500 Sobic004G034600 Sobic004G034600 Sobic007G084300--Sobic004G034600 Sobic007G084300--Sobic002G373100 Sobic007G084300--Sobic003G086900 Sobic009G016600 Sobic009G016600 Sobic007G084300--Sobic009G016600 Sobic002G249300 Sobic002G249300 Sobic007G084300--Sobic002G249300 Sobic002G193100 Sobic002G193100 Sobic007G084300--Sobic002G193100 Sobic001G029200 Sobic001G029200 Sobic002G072100--Sobic001G029200 Sobic001G413000 Sobic001G413000 Sobic002G072100--Sobic001G413000 Sobic010G035500 Sobic010G035500 Sobic002G072100--Sobic010G035500 Sobic010G272800 Sobic010G272800 Sobic002G072100--Sobic010G272800 Sobic006G259600 Sobic006G259600 Sobic002G072100--Sobic006G259600 Sobic008G081900 Sobic008G081900 Sobic002G072100--Sobic008G081900 Sobic002G072100--Sobic008G027200 Sobic001G086800 Sobic001G086800 Sobic002G072100--Sobic001G086800 Sobic003G129600 Sobic003G129600 Sobic002G072100--Sobic003G129600 Sobic003G080700 Sobic003G080700 Sobic003G080800--Sobic003G080700 Sobic010G205700 Sobic010G205700 Sobic003G080800--Sobic010G205700 Sobic003G014300 Sobic003G014300 Sobic003G080800--Sobic003G014300 Sobic008G065200 Sobic008G065200 Sobic003G080800--Sobic008G065200 Sobic005G175500 Sobic005G175500 Sobic003G080800--Sobic005G175500 Sobic003G080800--Sobic001G413000 Sobic003G080800--Sobic006G060601 Sobic009G019100 Sobic009G019100 Sobic003G080800--Sobic009G019100 Sobic004G300000 Sobic004G300000 Sobic003G080800--Sobic004G300000 Sobic002G118101--Sobic001G053200 Sobic002G321800 Sobic002G321800 Sobic002G118101--Sobic002G321800 Sobic008G089800 Sobic008G089800 Sobic002G118101--Sobic008G089800 Sobic002G118101--Sobic008G027200 Sobic004G044900 Sobic004G044900 Sobic002G118101--Sobic004G044900 Sobic002G118101--Sobic007G084300 Sobic002G118101--Sobic003G080800 Sobic002G017500 Sobic002G017500 Sobic002G118101--Sobic002G017500 Sobic002G118101--Sobic001G413000 Sobic003G378301 Sobic003G378301 Sobic005G045200--Sobic003G378301 Sobic004G068800 Sobic004G068800 Sobic005G045200--Sobic004G068800 Sobic006G060800 Sobic006G060800 Sobic005G045200--Sobic006G060800 Sobic010G130800 Sobic010G130800 Sobic005G045200--Sobic010G130800 Sobic004G217700 Sobic004G217700 Sobic005G045200--Sobic004G217700 Sobic003G366100 Sobic003G366100 Sobic005G045200--Sobic003G366100 Sobic001G145050 Sobic001G145050 Sobic005G045200--Sobic001G145050 Sobic007G025900 Sobic007G025900 Sobic005G045200--Sobic007G025900 Sobic003G410900 Sobic003G410900 Sobic005G045200--Sobic003G410900 Sobic009G213800 Sobic009G213800 Sobic006G060601--Sobic009G213800 Sobic010G077400 Sobic010G077400 Sobic006G060601--Sobic010G077400 Sobic006G060601--Sobic001G275500 Sobic006G060601--Sobic005G175500 Sobic003G422800 Sobic003G422800 Sobic006G060601--Sobic003G422800 Sobic010G207500 Sobic010G207500 Sobic006G060601--Sobic010G207500 Sobic003G359500 Sobic003G359500 Sobic006G060601--Sobic003G359500 Sobic006G060601--Sobic009G019100 Sobic002G025700 Sobic002G025700 Sobic006G060601--Sobic002G025700 Sobic001G053200--Sobic004G034600 Sobic005G133600 Sobic005G133600 Sobic001G053200--Sobic005G133600 Sobic001G223550 Sobic001G223550 Sobic001G053200--Sobic001G223550 Sobic003G174301 Sobic003G174301 Sobic001G053200--Sobic003G174301 Sobic001G053200--Sobic002G249300 Sobic001G053200--Sobic002G321800 Sobic005G149700 Sobic005G149700 Sobic001G053200--Sobic005G149700 Sobic006G175800 Sobic006G175800 Sobic001G053200--Sobic006G175800 Sobic003G160100 Sobic003G160100 Sobic001G053200--Sobic003G160100 Sobic001G275500--Sobic009G213800 Sobic001G275500--Sobic006G060601 Sobic001G275500--Sobic009G019100 Sobic001G275500--Sobic003G359500 Sobic002G217200 Sobic002G217200 Sobic001G275500--Sobic002G217200 Sobic001G275500--Sobic002G072100 Sobic001G275500--Sobic006G030600 Sobic001G275500--Sobic001G029200 Sobic001G275500--Sobic007G084300
Octagon: transcription factors


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