Gene annotation
Transcriptome id Sobic.002G373100.1,Sobic.002G373100.2
Synonym ATSSL4, SSL4
Functional annotation strictosidine synthase, putative, expressed
UniProt A0A1B6QFI5 , A0A1B6QFI2
Pfam PF03088
Panther DB PTHR10426 PTHR10426:SF35
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology GO:0016844; strictosidine synthase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G51420 : strictosidine synthase-like 4,Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os07g42250.1 : strictosidine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a015197
Brachypodium KQK15273 , KQK15272
Barley -
Wheat TraesCS2B02G196500 , TraesCS2D02G177700 , TraesCS2A02G170200 , TraesCS2A02G170200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G084300 kelch repeat protein, putative, expressed -
2 Sobic.008G027200 rp1, putative, expressed -
3 Sobic.006G143000 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
4 Sobic.003G086900 C2 domain containing protein, putative, expressed -
5 Sobic.010G196500 zinc-binding protein, putative, expressed -
6 Sobic.006G213500 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
7 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
8 Sobic.009G082000 TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
10 Sobic.003G162100 membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.001G451700 cytochrome P450 protein, putative, expressed -
12 Sobic.004G189900 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed K13418: somatic embryogenesis receptor kinase 1
13 Sobic.001G381200 vacuolar-sorting receptor precursor, putative, expressed -
14 Sobic.007G105400 ubiquitin-conjugating enzyme, putative, expressed K10579: UBE2M, ubiquitin-conjugating enzyme E2 M
15 Sobic.003G413500 expressed protein -
16 Sobic.003G412700 serine palmitoyltransferase 2, putative, expressed K00654: serine palmitoyltransferase
17 Sobic.001G298700 - -
18 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
19 Sobic.003G039700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
20 Sobic.002G040800 CAMK_CAMK_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic002G373100 Sobic002G373100 Sobic007G084300 Sobic007G084300 Sobic002G373100--Sobic007G084300 Sobic008G027200 Sobic008G027200 Sobic002G373100--Sobic008G027200 Sobic006G143000 Sobic006G143000 Sobic002G373100--Sobic006G143000 Sobic003G086900 Sobic003G086900 Sobic002G373100--Sobic003G086900 Sobic010G196500 Sobic010G196500 Sobic002G373100--Sobic010G196500 Sobic006G213500 Sobic006G213500 Sobic002G373100--Sobic006G213500 Sobic002G273700 Sobic002G273700 Sobic002G373100--Sobic002G273700 Sobic009G082000 Sobic009G082000 Sobic002G373100--Sobic009G082000 Sobic003G308700 Sobic003G308700 Sobic002G373100--Sobic003G308700 Sobic006G030600 Sobic006G030600 Sobic007G084300--Sobic006G030600 Sobic007G084300--Sobic006G143000 Sobic007G084300--Sobic010G196500 Sobic004G034600 Sobic004G034600 Sobic007G084300--Sobic004G034600 Sobic007G084300--Sobic002G373100 Sobic007G084300--Sobic003G086900 Sobic009G016600 Sobic009G016600 Sobic007G084300--Sobic009G016600 Sobic002G249300 Sobic002G249300 Sobic007G084300--Sobic002G249300 Sobic002G193100 Sobic002G193100 Sobic007G084300--Sobic002G193100 Sobic008G027200--Sobic002G373100 Sobic008G027200--Sobic007G084300 Sobic002G072100 Sobic002G072100 Sobic008G027200--Sobic002G072100 Sobic003G080800 Sobic003G080800 Sobic008G027200--Sobic003G080800 Sobic002G118101 Sobic002G118101 Sobic008G027200--Sobic002G118101 Sobic005G045200 Sobic005G045200 Sobic008G027200--Sobic005G045200 Sobic006G060601 Sobic006G060601 Sobic008G027200--Sobic006G060601 Sobic001G053200 Sobic001G053200 Sobic008G027200--Sobic001G053200 Sobic001G275500 Sobic001G275500 Sobic008G027200--Sobic001G275500 Sobic006G143000--Sobic007G084300 Sobic006G143000--Sobic009G016600 Sobic006G143000--Sobic003G086900 Sobic006G143000--Sobic006G030600 Sobic006G143000--Sobic002G373100 Sobic006G143000--Sobic010G196500 Sobic007G063300 Sobic007G063300 Sobic006G143000--Sobic007G063300 Sobic004G059300 Sobic004G059300 Sobic006G143000--Sobic004G059300 Sobic008G146900 Sobic008G146900 Sobic006G143000--Sobic008G146900 Sobic007G193700 Sobic007G193700 Sobic003G086900--Sobic007G193700 Sobic006G225900 Sobic006G225900 Sobic003G086900--Sobic006G225900 Sobic003G086900--Sobic010G196500 Sobic004G174200 Sobic004G174200 Sobic003G086900--Sobic004G174200 Sobic001G016700 Sobic001G016700 Sobic003G086900--Sobic001G016700 Sobic001G390800 Sobic001G390800 Sobic003G086900--Sobic001G390800 Sobic001G268200 Sobic001G268200 Sobic003G086900--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic003G086900--Sobic001G121200 Sobic003G422500 Sobic003G422500 Sobic003G086900--Sobic003G422500 Sobic001G488700 Sobic001G488700 Sobic010G196500--Sobic001G488700 Sobic001G500800 Sobic001G500800 Sobic010G196500--Sobic001G500800 Sobic010G196500--Sobic003G086900 Sobic010G196500--Sobic002G193100 Sobic010G196500--Sobic007G084300 Sobic002G386100 Sobic002G386100 Sobic010G196500--Sobic002G386100 Sobic010G196500--Sobic008G146900 Sobic001G381200 Sobic001G381200 Sobic010G196500--Sobic001G381200 Sobic002G187700 Sobic002G187700 Sobic010G196500--Sobic002G187700 Sobic006G213500--Sobic010G196500 Sobic006G213500--Sobic001G500800 Sobic006G213500--Sobic002G193100 Sobic007G169300 Sobic007G169300 Sobic006G213500--Sobic007G169300 Sobic006G213500--Sobic001G381200 Sobic003G343500 Sobic003G343500 Sobic006G213500--Sobic003G343500 Sobic002G116800 Sobic002G116800 Sobic006G213500--Sobic002G116800 Sobic006G213500--Sobic007G084300 Sobic006G213500--Sobic001G488700 Sobic007G054100 Sobic007G054100 Sobic002G273700--Sobic007G054100 Sobic002G273700--Sobic003G308700 Sobic004G340700 Sobic004G340700 Sobic002G273700--Sobic004G340700 Sobic002G273700--Sobic002G373100 Sobic002G040800 Sobic002G040800 Sobic002G273700--Sobic002G040800 Sobic008G001400 Sobic008G001400 Sobic002G273700--Sobic008G001400 Sobic007G120401 Sobic007G120401 Sobic002G273700--Sobic007G120401 Sobic009G082200 Sobic009G082200 Sobic002G273700--Sobic009G082200 Sobic006G042200 Sobic006G042200 Sobic002G273700--Sobic006G042200 Sobic001G413000 Sobic001G413000 Sobic009G082000--Sobic001G413000 Sobic008G081300 Sobic008G081300 Sobic009G082000--Sobic008G081300 Sobic009G082000--Sobic010G196500 Sobic005G075100 Sobic005G075100 Sobic009G082000--Sobic005G075100 Sobic002G001000 Sobic002G001000 Sobic009G082000--Sobic002G001000 Sobic001G081200 Sobic001G081200 Sobic009G082000--Sobic001G081200 Sobic009G082000--Sobic003G086900 Sobic009G082000--Sobic002G193100 Sobic002G339300 Sobic002G339300 Sobic009G082000--Sobic002G339300 Sobic002G073900 Sobic002G073900 Sobic003G308700--Sobic002G073900 Sobic003G308700--Sobic007G054100 Sobic002G174900 Sobic002G174900 Sobic003G308700--Sobic002G174900 Sobic003G308700--Sobic002G273700 Sobic006G172900 Sobic006G172900 Sobic003G308700--Sobic006G172900 Sobic009G094800 Sobic009G094800 Sobic003G308700--Sobic009G094800 Sobic001G387600 Sobic001G387600 Sobic003G308700--Sobic001G387600 Sobic009G008100 Sobic009G008100 Sobic003G308700--Sobic009G008100 Sobic002G187801 Sobic002G187801 Sobic003G308700--Sobic002G187801
Octagon: transcription factors


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