Gene annotation
Transcriptome id Sobic.004G189900.1
Synonym Sb04g023810, SERK1, ATSERK1
Functional annotation BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
UniProt C5XVP5
Pfam PF00560 PF08263 PF00069
Panther DB PTHR27001 PTHR27001:SF224
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K13418; somatic embryogenesis receptor kinase 1
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G71830 : somatic embryogenesis receptor-like kinase 1
RAP-DB (Rice) LOC_Os04g38480.1 : BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020793 , Zm00025a031713
Brachypodium KQJ95194 , PNT61220 , KQJ82949 , KQK00013
Barley HORVU6Hr1G049080.15 , HORVU6Hr1G049080.14 , HORVU6Hr1G049080.13 , HORVU6Hr1G049080.12 , HORVU6Hr1G049080.11 , HORVU6Hr1G049080.10 , HORVU2Hr1G080020.6 , HORVU2Hr1G080020.7 , HORVU2Hr1G080020.4 , HORVU2Hr1G080020.2 , HORVU6Hr1G049080.7 , HORVU6Hr1G049080.6 , HORVU6Hr1G049080.9 , HORVU6Hr1G049080.8 , HORVU2Hr1G080020.5 , HORVU2Hr1G080020.3 , HORVU2Hr1G080020.8 , HORVU2Hr1G080020.9
Wheat TraesCS6D02G186900 , TraesCS6D02G186900 , TraesCS6D02G186900 , TraesCS2D02G321400 , TraesCS2B02G340700 , TraesCS6B02G223700 , TraesCS6B02G223700 , TraesCS6B02G223700 , TraesCS6A02G203600 , TraesCS6A02G203600 , TraesCS6A02G203600 , TraesCS6A02G203600 , TraesCS2A02G343100
Populus PNT35597 , PNT27772 , PNT27771


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cDNA sequences
Sobic.004G189900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
2 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
3 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
4 Sobic.010G184600 Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
5 Sobic.004G183800 AAA family ATPase, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
6 Sobic.004G181700 calmodulin binding protein, putative, expressed -
7 Sobic.002G137000 protein kinase, putative, expressed -
8 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
9 Sobic.003G014300 expressed protein -
10 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
11 Sobic.008G022300 OsWAK116 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
12 Sobic.008G144800 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
13 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
14 Sobic.003G007700 ethylene-responsive protein related, putative, expressed -
15 Sobic.002G193100 expressed protein -
16 Sobic.010G030300 serine threonine kinase, putative, expressed -
17 Sobic.009G082000 TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.002G362100 expressed protein -
19 Sobic.002G040800 CAMK_CAMK_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.002G137100 protein kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic004G189900 Sobic004G189900 Sobic008G146900 Sobic008G146900 Sobic004G189900--Sobic008G146900 Sobic010G207500 Sobic010G207500 Sobic004G189900--Sobic010G207500 Sobic009G017400 Sobic009G017400 Sobic004G189900--Sobic009G017400 Sobic010G184600 Sobic010G184600 Sobic004G189900--Sobic010G184600 Sobic004G183800 Sobic004G183800 Sobic004G189900--Sobic004G183800 Sobic004G181700 Sobic004G181700 Sobic004G189900--Sobic004G181700 Sobic002G137000 Sobic002G137000 Sobic004G189900--Sobic002G137000 Sobic001G351400 Sobic001G351400 Sobic004G189900--Sobic001G351400 Sobic003G014300 Sobic003G014300 Sobic004G189900--Sobic003G014300 Sobic008G146900--Sobic010G184600 Sobic002G276100 Sobic002G276100 Sobic008G146900--Sobic002G276100 Sobic001G159400 Sobic001G159400 Sobic008G146900--Sobic001G159400 Sobic010G196500 Sobic010G196500 Sobic008G146900--Sobic010G196500 Sobic008G146900--Sobic004G181700 Sobic008G144800 Sobic008G144800 Sobic008G146900--Sobic008G144800 Sobic008G146900--Sobic004G189900 Sobic002G193100 Sobic002G193100 Sobic008G146900--Sobic002G193100 Sobic008G146900--Sobic003G014300 Sobic002G025700 Sobic002G025700 Sobic010G207500--Sobic002G025700 Sobic006G201100 Sobic006G201100 Sobic010G207500--Sobic006G201100 Sobic004G300000 Sobic004G300000 Sobic010G207500--Sobic004G300000 Sobic002G362100 Sobic002G362100 Sobic010G207500--Sobic002G362100 Sobic002G046900 Sobic002G046900 Sobic010G207500--Sobic002G046900 Sobic010G035500 Sobic010G035500 Sobic010G207500--Sobic010G035500 Sobic004G164200 Sobic004G164200 Sobic010G207500--Sobic004G164200 Sobic009G141400 Sobic009G141400 Sobic010G207500--Sobic009G141400 Sobic010G207500--Sobic001G351400 Sobic006G199200 Sobic006G199200 Sobic009G017400--Sobic006G199200 Sobic001G493200 Sobic001G493200 Sobic009G017400--Sobic001G493200 Sobic004G021200 Sobic004G021200 Sobic009G017400--Sobic004G021200 Sobic009G017400--Sobic002G276100 Sobic001G281600 Sobic001G281600 Sobic009G017400--Sobic001G281600 Sobic003G266001 Sobic003G266001 Sobic009G017400--Sobic003G266001 Sobic002G313400 Sobic002G313400 Sobic009G017400--Sobic002G313400 Sobic002G122600 Sobic002G122600 Sobic009G017400--Sobic002G122600 Sobic010G205800 Sobic010G205800 Sobic009G017400--Sobic010G205800 Sobic010G184600--Sobic008G146900 Sobic006G258700 Sobic006G258700 Sobic010G184600--Sobic006G258700 Sobic010G184600--Sobic001G351400 Sobic010G184600--Sobic003G014300 Sobic003G343400 Sobic003G343400 Sobic010G184600--Sobic003G343400 Sobic001G418700 Sobic001G418700 Sobic010G184600--Sobic001G418700 Sobic003G007700 Sobic003G007700 Sobic010G184600--Sobic003G007700 Sobic009G034600 Sobic009G034600 Sobic010G184600--Sobic009G034600 Sobic010G184600--Sobic004G189900 Sobic010G189200 Sobic010G189200 Sobic004G183800--Sobic010G189200 Sobic004G210900 Sobic004G210900 Sobic004G183800--Sobic004G210900 Sobic005G175500 Sobic005G175500 Sobic004G183800--Sobic005G175500 Sobic010G109600 Sobic010G109600 Sobic004G183800--Sobic010G109600 Sobic001G043800 Sobic001G043800 Sobic004G183800--Sobic001G043800 Sobic001G300100 Sobic001G300100 Sobic004G183800--Sobic001G300100 Sobic009G193500 Sobic009G193500 Sobic004G183800--Sobic009G193500 Sobic008G063200 Sobic008G063200 Sobic004G183800--Sobic008G063200 Sobic004G183800--Sobic002G276100 Sobic004G317100 Sobic004G317100 Sobic004G181700--Sobic004G317100 Sobic004G181700--Sobic002G276100 Sobic004G181700--Sobic001G159400 Sobic004G181600 Sobic004G181600 Sobic004G181700--Sobic004G181600 Sobic004G181700--Sobic008G146900 Sobic001G191600 Sobic001G191600 Sobic004G181700--Sobic001G191600 Sobic009G097200 Sobic009G097200 Sobic004G181700--Sobic009G097200 Sobic006G086500 Sobic006G086500 Sobic004G181700--Sobic006G086500 Sobic008G172300 Sobic008G172300 Sobic004G181700--Sobic008G172300 Sobic010G094900 Sobic010G094900 Sobic002G137000--Sobic010G094900 Sobic002G137000--Sobic002G276100 Sobic002G137000--Sobic008G146900 Sobic008G130100 Sobic008G130100 Sobic002G137000--Sobic008G130100 Sobic002G168500 Sobic002G168500 Sobic002G137000--Sobic002G168500 Sobic004G026500 Sobic004G026500 Sobic002G137000--Sobic004G026500 Sobic002G345700 Sobic002G345700 Sobic002G137000--Sobic002G345700 Sobic002G137000--Sobic004G181600 Sobic003G381200 Sobic003G381200 Sobic002G137000--Sobic003G381200 Sobic001G351400--Sobic006G258700 Sobic009G189000 Sobic009G189000 Sobic001G351400--Sobic009G189000 Sobic001G102300 Sobic001G102300 Sobic001G351400--Sobic001G102300 Sobic001G351400--Sobic002G362100 Sobic001G351400--Sobic010G207500 Sobic001G404500 Sobic001G404500 Sobic001G351400--Sobic001G404500 Sobic001G351400--Sobic010G184600 Sobic003G410900 Sobic003G410900 Sobic001G351400--Sobic003G410900 Sobic001G525900 Sobic001G525900 Sobic001G351400--Sobic001G525900 Sobic003G014300--Sobic006G258700 Sobic004G298900 Sobic004G298900 Sobic003G014300--Sobic004G298900 Sobic010G269400 Sobic010G269400 Sobic003G014300--Sobic010G269400 Sobic003G014300--Sobic004G300000 Sobic003G037300 Sobic003G037300 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic003G014300--Sobic005G175500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500
Octagon: transcription factors


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