Gene annotation
Transcriptome id Sobic.001G029200.1
Synonym Sb01g002750, NPC1
Functional annotation phosphoesterase family protein, putative, expressed
UniProt C5WU42
Pfam PF04185
Panther DB PTHR31956 PTHR31956:SF9
NCBI CDD -
KEGG Orthology K01114; phospholipase C
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G07230 : non-specific phospholipase C1
RAP-DB (Rice) LOC_Os03g61130.1 : phosphoesterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a016400 , Zm00025a025938 , Zm00025a008875
Brachypodium KQK12366
Barley HORVU5Hr1G115230.1 , HORVU5Hr1G115230.3 , HORVU5Hr1G115230.2 , HORVU5Hr1G115230.4 , HORVU7Hr1G087310.1 , HORVU7Hr1G087600.2
Wheat TraesCS5B02G503200 , TraesCS4A02G369500 , TraesCS5A02G489800 , TraesCS5A02G489800 , TraesCS5D02G504100
Populus -


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cDNA sequences
Sobic.001G029200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
2 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
3 Sobic.009G019100 expressed protein K13473: chitin elicitor-binding protein
4 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
5 Sobic.009G213800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
6 Sobic.007G227700 expressed protein -
7 Sobic.002G193100 expressed protein -
8 Sobic.004G026500 expressed protein -
9 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
10 Sobic.002G137300 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
11 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
12 Sobic.002G072100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.001G072700 expressed protein -
14 Sobic.003G306700 acetamidase, putative, expressed K01455: formamidase
15 Sobic.003G014300 expressed protein -
16 Sobic.002G136100 genetic modifier, putative, expressed -
17 Sobic.008G037800 ACT domain containing protein, expressed -
18 Sobic.006G201100 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
19 Sobic.004G262700 - -
20 Sobic.010G140600 bolA, putative, expressed -


Gene co-expression network
sample Sobic001G029200 Sobic001G029200 Sobic010G035500 Sobic010G035500 Sobic001G029200--Sobic010G035500 Sobic004G300000 Sobic004G300000 Sobic001G029200--Sobic004G300000 Sobic009G019100 Sobic009G019100 Sobic001G029200--Sobic009G019100 Sobic008G081900 Sobic008G081900 Sobic001G029200--Sobic008G081900 Sobic009G213800 Sobic009G213800 Sobic001G029200--Sobic009G213800 Sobic007G227700 Sobic007G227700 Sobic001G029200--Sobic007G227700 Sobic002G193100 Sobic002G193100 Sobic001G029200--Sobic002G193100 Sobic004G026500 Sobic004G026500 Sobic001G029200--Sobic004G026500 Sobic002G339300 Sobic002G339300 Sobic001G029200--Sobic002G339300 Sobic010G035500--Sobic004G300000 Sobic010G035500--Sobic001G029200 Sobic006G214700 Sobic006G214700 Sobic010G035500--Sobic006G214700 Sobic002G025700 Sobic002G025700 Sobic010G035500--Sobic002G025700 Sobic006G201100 Sobic006G201100 Sobic010G035500--Sobic006G201100 Sobic009G141400 Sobic009G141400 Sobic010G035500--Sobic009G141400 Sobic010G035500--Sobic009G019100 Sobic010G035500--Sobic008G081900 Sobic006G193200 Sobic006G193200 Sobic010G035500--Sobic006G193200 Sobic004G300000--Sobic010G035500 Sobic004G300000--Sobic002G025700 Sobic004G300000--Sobic006G193200 Sobic004G300000--Sobic006G214700 Sobic003G108900 Sobic003G108900 Sobic004G300000--Sobic003G108900 Sobic010G197000 Sobic010G197000 Sobic004G300000--Sobic010G197000 Sobic004G165900 Sobic004G165900 Sobic004G300000--Sobic004G165900 Sobic003G014300 Sobic003G014300 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600 Sobic009G019100--Sobic009G213800 Sobic009G019100--Sobic010G035500 Sobic009G019100--Sobic001G029200 Sobic002G046900 Sobic002G046900 Sobic009G019100--Sobic002G046900 Sobic009G019100--Sobic004G300000 Sobic005G175500 Sobic005G175500 Sobic009G019100--Sobic005G175500 Sobic009G019100--Sobic008G081900 Sobic003G359500 Sobic003G359500 Sobic009G019100--Sobic003G359500 Sobic003G306700 Sobic003G306700 Sobic009G019100--Sobic003G306700 Sobic002G129400 Sobic002G129400 Sobic008G081900--Sobic002G129400 Sobic001G219700 Sobic001G219700 Sobic008G081900--Sobic001G219700 Sobic004G307100 Sobic004G307100 Sobic008G081900--Sobic004G307100 Sobic008G081900--Sobic010G035500 Sobic007G166200 Sobic007G166200 Sobic008G081900--Sobic007G166200 Sobic007G169300 Sobic007G169300 Sobic008G081900--Sobic007G169300 Sobic008G081900--Sobic004G300000 Sobic008G081900--Sobic004G026500 Sobic006G030400 Sobic006G030400 Sobic008G081900--Sobic006G030400 Sobic009G213800--Sobic009G019100 Sobic001G275500 Sobic001G275500 Sobic009G213800--Sobic001G275500 Sobic006G060601 Sobic006G060601 Sobic009G213800--Sobic006G060601 Sobic009G213800--Sobic001G029200 Sobic009G213800--Sobic010G035500 Sobic009G213800--Sobic003G359500 Sobic009G213800--Sobic006G201100 Sobic009G213800--Sobic002G046900 Sobic009G213800--Sobic004G300000 Sobic007G227700--Sobic007G169300 Sobic001G072700 Sobic001G072700 Sobic007G227700--Sobic001G072700 Sobic007G227700--Sobic004G026500 Sobic007G227700--Sobic002G193100 Sobic010G140600 Sobic010G140600 Sobic007G227700--Sobic010G140600 Sobic007G227700--Sobic001G029200 Sobic002G001000 Sobic002G001000 Sobic007G227700--Sobic002G001000 Sobic007G227700--Sobic008G081900 Sobic002G349100 Sobic002G349100 Sobic007G227700--Sobic002G349100 Sobic002G193100--Sobic004G026500 Sobic010G196500 Sobic010G196500 Sobic002G193100--Sobic010G196500 Sobic002G193100--Sobic007G227700 Sobic002G193100--Sobic007G169300 Sobic002G276100 Sobic002G276100 Sobic002G193100--Sobic002G276100 Sobic006G065600 Sobic006G065600 Sobic002G193100--Sobic006G065600 Sobic003G343500 Sobic003G343500 Sobic002G193100--Sobic003G343500 Sobic002G193100--Sobic001G219700 Sobic002G345700 Sobic002G345700 Sobic002G193100--Sobic002G345700 Sobic008G172300 Sobic008G172300 Sobic004G026500--Sobic008G172300 Sobic001G124100 Sobic001G124100 Sobic004G026500--Sobic001G124100 Sobic009G193500 Sobic009G193500 Sobic004G026500--Sobic009G193500 Sobic004G026500--Sobic001G219700 Sobic004G026500--Sobic001G072700 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic004G026500--Sobic007G227700 Sobic004G026500--Sobic002G276100 Sobic004G262700 Sobic004G262700 Sobic002G339300--Sobic004G262700 Sobic002G339300--Sobic004G026500 Sobic002G339300--Sobic009G193500 Sobic002G339300--Sobic001G124100 Sobic001G396000 Sobic001G396000 Sobic002G339300--Sobic001G396000 Sobic003G193200 Sobic003G193200 Sobic002G339300--Sobic003G193200 Sobic003G190000 Sobic003G190000 Sobic002G339300--Sobic003G190000 Sobic002G168500 Sobic002G168500 Sobic002G339300--Sobic002G168500 Sobic002G339300--Sobic010G197000
Octagon: transcription factors


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