Gene annotation
Transcriptome id Sobic.003G306700.1
Synonym Sb03g035520
Functional annotation acetamidase, putative, expressed
UniProt C5XKW7
Pfam PF03069
Panther DB PTHR31891 PTHR31891:SF1
NCBI CDD -
KEGG Orthology K01455; formamidase
Gene Ontology GO:0016811; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides


Orthologs (automatic annotation)
TAIR AT4G37560 : Acetamidase/Formamidase family protein
RAP-DB (Rice) LOC_Os01g55950.1 : acetamidase, putative, expressed
MaizeGDB (Corn) Zm00025a027436 , Zm00025a039947
Brachypodium KQK09906
Barley HORVU6Hr1G087300.2 , HORVU6Hr1G087300.1 , HORVU3Hr1G074250.17 , HORVU3Hr1G074250.16 , HORVU3Hr1G074250.15 , HORVU3Hr1G074250.14 , HORVU3Hr1G074250.13 , HORVU3Hr1G074250.12 , HORVU3Hr1G074250.9 , HORVU3Hr1G074250.6 , HORVU3Hr1G074250.5 , HORVU3Hr1G074250.1
Wheat TraesCS3D02G300700 , TraesCS3D02G300700 , TraesCS3D02G300700 , TraesCS3A02G301100 , TraesCS6B02G406900 , TraesCS6D02G354000 , TraesCS3B02G335400 , TraesCS3B02G335400 , TraesCS3B02G335400
Populus -


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cDNA sequences
Sobic.003G306700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
2 Sobic.006G201100 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
3 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
4 Sobic.006G214700 APO, putative, expressed -
5 Sobic.009G079950 - -
6 Sobic.002G025700 lectin-like receptor kinase, putative, expressed -
7 Sobic.002G331800 PPR repeat containing protein, expressed -
8 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.004G164200 heavy metal-associated domain containing protein, expressed K07213: ATOX1, ATX1, copZ, copper chaperone
10 Sobic.009G019100 expressed protein K13473: chitin elicitor-binding protein
11 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
12 Sobic.009G141400 transcriptional regulator, putative, expressed -
13 Sobic.003G359500 expressed protein -
14 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
15 Sobic.008G037800 ACT domain containing protein, expressed -
16 Sobic.006G155500 expressed protein -
17 Sobic.010G205700 Leucine Rich Repeat family protein, expressed -
18 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
19 Sobic.002G354600 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -


Gene co-expression network
sample Sobic003G306700 Sobic003G306700 Sobic004G300000 Sobic004G300000 Sobic003G306700--Sobic004G300000 Sobic006G201100 Sobic006G201100 Sobic003G306700--Sobic006G201100 Sobic010G035500 Sobic010G035500 Sobic003G306700--Sobic010G035500 Sobic006G214700 Sobic006G214700 Sobic003G306700--Sobic006G214700 Sobic009G079950 Sobic009G079950 Sobic003G306700--Sobic009G079950 Sobic002G025700 Sobic002G025700 Sobic003G306700--Sobic002G025700 Sobic002G331800 Sobic002G331800 Sobic003G306700--Sobic002G331800 Sobic006G110900 Sobic006G110900 Sobic003G306700--Sobic006G110900 Sobic004G164200 Sobic004G164200 Sobic003G306700--Sobic004G164200 Sobic004G300000--Sobic010G035500 Sobic004G300000--Sobic002G025700 Sobic006G193200 Sobic006G193200 Sobic004G300000--Sobic006G193200 Sobic004G300000--Sobic006G214700 Sobic003G108900 Sobic003G108900 Sobic004G300000--Sobic003G108900 Sobic010G197000 Sobic010G197000 Sobic004G300000--Sobic010G197000 Sobic004G165900 Sobic004G165900 Sobic004G300000--Sobic004G165900 Sobic003G014300 Sobic003G014300 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600 Sobic006G201100--Sobic010G035500 Sobic006G201100--Sobic006G214700 Sobic002G046900 Sobic002G046900 Sobic006G201100--Sobic002G046900 Sobic010G207500 Sobic010G207500 Sobic006G201100--Sobic010G207500 Sobic006G201100--Sobic004G300000 Sobic006G201100--Sobic006G110900 Sobic006G201100--Sobic003G306700 Sobic006G201100--Sobic004G164200 Sobic009G141400 Sobic009G141400 Sobic006G201100--Sobic009G141400 Sobic010G035500--Sobic004G300000 Sobic001G029200 Sobic001G029200 Sobic010G035500--Sobic001G029200 Sobic010G035500--Sobic006G214700 Sobic010G035500--Sobic002G025700 Sobic010G035500--Sobic006G201100 Sobic010G035500--Sobic009G141400 Sobic009G019100 Sobic009G019100 Sobic010G035500--Sobic009G019100 Sobic008G081900 Sobic008G081900 Sobic010G035500--Sobic008G081900 Sobic010G035500--Sobic006G193200 Sobic003G179400 Sobic003G179400 Sobic006G214700--Sobic003G179400 Sobic001G450600 Sobic001G450600 Sobic006G214700--Sobic001G450600 Sobic006G214700--Sobic002G331800 Sobic005G028900 Sobic005G028900 Sobic006G214700--Sobic005G028900 Sobic006G214700--Sobic006G110900 Sobic004G333400 Sobic004G333400 Sobic006G214700--Sobic004G333400 Sobic003G253300 Sobic003G253300 Sobic006G214700--Sobic003G253300 Sobic008G063200 Sobic008G063200 Sobic006G214700--Sobic008G063200 Sobic010G076800 Sobic010G076800 Sobic006G214700--Sobic010G076800 Sobic009G079950--Sobic009G141400 Sobic009G079950--Sobic003G306700 Sobic009G079950--Sobic006G214700 Sobic010G231100 Sobic010G231100 Sobic009G079950--Sobic010G231100 Sobic009G079950--Sobic004G300000 Sobic001G207200 Sobic001G207200 Sobic009G079950--Sobic001G207200 Sobic009G079950--Sobic006G201100 Sobic009G079950--Sobic010G207500 Sobic009G079950--Sobic001G450600 Sobic002G025700--Sobic004G300000 Sobic004G089200 Sobic004G089200 Sobic002G025700--Sobic004G089200 Sobic002G025700--Sobic010G035500 Sobic003G359500 Sobic003G359500 Sobic002G025700--Sobic003G359500 Sobic002G025700--Sobic010G207500 Sobic002G025700--Sobic002G354600 Sobic002G025700--Sobic004G165900 Sobic010G205700 Sobic010G205700 Sobic002G025700--Sobic010G205700 Sobic002G025700--Sobic006G193200 Sobic002G331800--Sobic010G076800 Sobic002G331800--Sobic006G214700 Sobic003G439600 Sobic003G439600 Sobic002G331800--Sobic003G439600 Sobic002G331800--Sobic004G333400 Sobic010G183400 Sobic010G183400 Sobic002G331800--Sobic010G183400 Sobic001G118400 Sobic001G118400 Sobic002G331800--Sobic001G118400 Sobic002G331800--Sobic001G450600 Sobic003G125900 Sobic003G125900 Sobic002G331800--Sobic003G125900 Sobic003G245800 Sobic003G245800 Sobic002G331800--Sobic003G245800 Sobic006G110900--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic006G110900--Sobic001G286600 Sobic006G155500 Sobic006G155500 Sobic006G110900--Sobic006G155500 Sobic006G110900--Sobic006G214700 Sobic006G110900--Sobic008G063200 Sobic006G110900--Sobic001G118400 Sobic004G224500 Sobic004G224500 Sobic006G110900--Sobic004G224500 Sobic003G328100 Sobic003G328100 Sobic006G110900--Sobic003G328100 Sobic006G050400 Sobic006G050400 Sobic006G110900--Sobic006G050400 Sobic004G164200--Sobic006G201100 Sobic004G164200--Sobic002G046900 Sobic004G164200--Sobic010G207500 Sobic004G164200--Sobic003G306700 Sobic004G164200--Sobic002G025700 Sobic005G175600 Sobic005G175600 Sobic004G164200--Sobic005G175600 Sobic002G362100 Sobic002G362100 Sobic004G164200--Sobic002G362100 Sobic003G208300 Sobic003G208300 Sobic004G164200--Sobic003G208300 Sobic006G123500 Sobic006G123500 Sobic004G164200--Sobic006G123500
Octagon: transcription factors


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