Gene annotation
Transcriptome id Sobic.003G359500.1
Synonym Sb03g040140
Functional annotation expressed protein
UniProt C5XPW0
Pfam -
Panther DB PTHR35731 PTHR35731:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09050 : -
RAP-DB (Rice) LOC_Os01g63410.1 : expressed protein
MaizeGDB (Corn) Zm00025a026825 , Zm00025a039622
Brachypodium -
Barley HORVU3Hr1G085230.2 , HORVU3Hr1G085230.1 , HORVU3Hr1G085230.5 , HORVU3Hr1G085230.4 , HORVU3Hr1G085230.6 , HORVU3Hr1G085230.3
Wheat TraesCS3A02G367400
Populus -


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cDNA sequences
Sobic.003G359500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
2 Sobic.002G025700 lectin-like receptor kinase, putative, expressed -
3 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
4 Sobic.009G213800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
5 Sobic.006G214700 APO, putative, expressed -
6 Sobic.006G201100 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.009G019100 expressed protein K13473: chitin elicitor-binding protein
8 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
9 Sobic.006G060601 - -
10 Sobic.004G089200 ABC transporter, ATP-binding protein, putative, expressed -
11 Sobic.003G306700 acetamidase, putative, expressed K01455: formamidase
12 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
13 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
14 Sobic.006G030400 xa21, putative, expressed -
15 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
16 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
17 Sobic.005G138600 - -
18 Sobic.004G252500 OsProtIV1 - Putative Protease IV homologue@ Domain 2 is a SPH, expressed K04773: protease IV
19 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
20 Sobic.001G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -


Gene co-expression network
sample Sobic003G359500 Sobic003G359500 Sobic004G300000 Sobic004G300000 Sobic003G359500--Sobic004G300000 Sobic002G025700 Sobic002G025700 Sobic003G359500--Sobic002G025700 Sobic010G035500 Sobic010G035500 Sobic003G359500--Sobic010G035500 Sobic009G213800 Sobic009G213800 Sobic003G359500--Sobic009G213800 Sobic006G214700 Sobic006G214700 Sobic003G359500--Sobic006G214700 Sobic006G201100 Sobic006G201100 Sobic003G359500--Sobic006G201100 Sobic009G019100 Sobic009G019100 Sobic003G359500--Sobic009G019100 Sobic010G197000 Sobic010G197000 Sobic003G359500--Sobic010G197000 Sobic006G060601 Sobic006G060601 Sobic003G359500--Sobic006G060601 Sobic004G300000--Sobic010G035500 Sobic004G300000--Sobic002G025700 Sobic006G193200 Sobic006G193200 Sobic004G300000--Sobic006G193200 Sobic004G300000--Sobic006G214700 Sobic003G108900 Sobic003G108900 Sobic004G300000--Sobic003G108900 Sobic004G300000--Sobic010G197000 Sobic004G165900 Sobic004G165900 Sobic004G300000--Sobic004G165900 Sobic003G014300 Sobic003G014300 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600 Sobic002G025700--Sobic004G300000 Sobic004G089200 Sobic004G089200 Sobic002G025700--Sobic004G089200 Sobic002G025700--Sobic010G035500 Sobic002G025700--Sobic003G359500 Sobic010G207500 Sobic010G207500 Sobic002G025700--Sobic010G207500 Sobic002G025700--Sobic002G354600 Sobic002G025700--Sobic004G165900 Sobic010G205700 Sobic010G205700 Sobic002G025700--Sobic010G205700 Sobic002G025700--Sobic006G193200 Sobic010G035500--Sobic004G300000 Sobic001G029200 Sobic001G029200 Sobic010G035500--Sobic001G029200 Sobic010G035500--Sobic006G214700 Sobic010G035500--Sobic002G025700 Sobic010G035500--Sobic006G201100 Sobic009G141400 Sobic009G141400 Sobic010G035500--Sobic009G141400 Sobic010G035500--Sobic009G019100 Sobic008G081900 Sobic008G081900 Sobic010G035500--Sobic008G081900 Sobic010G035500--Sobic006G193200 Sobic009G213800--Sobic009G019100 Sobic001G275500 Sobic001G275500 Sobic009G213800--Sobic001G275500 Sobic009G213800--Sobic006G060601 Sobic009G213800--Sobic001G029200 Sobic009G213800--Sobic010G035500 Sobic009G213800--Sobic003G359500 Sobic009G213800--Sobic006G201100 Sobic002G046900 Sobic002G046900 Sobic009G213800--Sobic002G046900 Sobic009G213800--Sobic004G300000 Sobic003G179400 Sobic003G179400 Sobic006G214700--Sobic003G179400 Sobic001G450600 Sobic001G450600 Sobic006G214700--Sobic001G450600 Sobic002G331800 Sobic002G331800 Sobic006G214700--Sobic002G331800 Sobic005G028900 Sobic005G028900 Sobic006G214700--Sobic005G028900 Sobic006G110900 Sobic006G110900 Sobic006G214700--Sobic006G110900 Sobic004G333400 Sobic004G333400 Sobic006G214700--Sobic004G333400 Sobic003G253300 Sobic003G253300 Sobic006G214700--Sobic003G253300 Sobic008G063200 Sobic008G063200 Sobic006G214700--Sobic008G063200 Sobic010G076800 Sobic010G076800 Sobic006G214700--Sobic010G076800 Sobic006G201100--Sobic010G035500 Sobic006G201100--Sobic006G214700 Sobic006G201100--Sobic002G046900 Sobic006G201100--Sobic010G207500 Sobic006G201100--Sobic004G300000 Sobic006G201100--Sobic006G110900 Sobic003G306700 Sobic003G306700 Sobic006G201100--Sobic003G306700 Sobic004G164200 Sobic004G164200 Sobic006G201100--Sobic004G164200 Sobic006G201100--Sobic009G141400 Sobic009G019100--Sobic009G213800 Sobic009G019100--Sobic010G035500 Sobic009G019100--Sobic001G029200 Sobic009G019100--Sobic002G046900 Sobic009G019100--Sobic004G300000 Sobic005G175500 Sobic005G175500 Sobic009G019100--Sobic005G175500 Sobic009G019100--Sobic008G081900 Sobic009G019100--Sobic003G359500 Sobic009G019100--Sobic003G306700 Sobic009G014100 Sobic009G014100 Sobic010G197000--Sobic009G014100 Sobic010G197000--Sobic002G354600 Sobic005G138600 Sobic005G138600 Sobic010G197000--Sobic005G138600 Sobic010G197000--Sobic004G300000 Sobic010G109600 Sobic010G109600 Sobic010G197000--Sobic010G109600 Sobic003G190000 Sobic003G190000 Sobic010G197000--Sobic003G190000 Sobic010G197000--Sobic002G331800 Sobic010G197000--Sobic006G214700 Sobic008G172300 Sobic008G172300 Sobic010G197000--Sobic008G172300 Sobic006G060601--Sobic009G213800 Sobic010G077400 Sobic010G077400 Sobic006G060601--Sobic010G077400 Sobic006G060601--Sobic001G275500 Sobic006G060601--Sobic005G175500 Sobic003G422800 Sobic003G422800 Sobic006G060601--Sobic003G422800 Sobic006G060601--Sobic010G207500 Sobic006G060601--Sobic003G359500 Sobic006G060601--Sobic009G019100 Sobic006G060601--Sobic002G025700
Octagon: transcription factors


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