Gene annotation
Transcriptome id Sobic.010G205700.8,Sobic.010G205700.7,Sobic.010G205700.12,Sobic.010G205700.9,Sobic.010G205700.10,Sobic.010G205700.6,Sobic.010G205700.13,Sobic.010G205700.11,Sobic.010G205700.5
Synonym
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt A0A194YKJ1 , A0A1W0VU25
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF648
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os06g43670.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G025700 lectin-like receptor kinase, putative, expressed -
2 Sobic.004G089200 ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
4 Sobic.003G306700 acetamidase, putative, expressed K01455: formamidase
5 Sobic.008G065200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor protein kinase, putative, expressed -
6 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
7 Sobic.003G080800 expressed protein -
8 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
9 Sobic.007G149700 TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
11 Sobic.001G413000 ABC transporter family protein, putative, expressed -
12 Sobic.004G164200 heavy metal-associated domain containing protein, expressed K07213: ATOX1, ATX1, copZ, copper chaperone
13 Sobic.006G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
14 Sobic.006G026100 expressed protein -
15 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
16 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
17 Sobic.003G223400 down-regulated TF in developmental senescence(PubMedID : 27586543)@expressed protein K09422: transcription factor MYB, plant
18 Sobic.006G060601 - -
19 Sobic.003G190100 vacuolar-processing enzyme precursor, putative, expressed K01369: legumain
20 Sobic.002G001900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G205700 Sobic010G205700 Sobic002G025700 Sobic002G025700 Sobic010G205700--Sobic002G025700 Sobic004G089200 Sobic004G089200 Sobic010G205700--Sobic004G089200 Sobic004G300000 Sobic004G300000 Sobic010G205700--Sobic004G300000 Sobic003G306700 Sobic003G306700 Sobic010G205700--Sobic003G306700 Sobic008G065200 Sobic008G065200 Sobic010G205700--Sobic008G065200 Sobic002G173100 Sobic002G173100 Sobic010G205700--Sobic002G173100 Sobic003G080800 Sobic003G080800 Sobic010G205700--Sobic003G080800 Sobic004G268500 Sobic004G268500 Sobic010G205700--Sobic004G268500 Sobic007G149700 Sobic007G149700 Sobic010G205700--Sobic007G149700 Sobic002G025700--Sobic004G300000 Sobic002G025700--Sobic004G089200 Sobic010G035500 Sobic010G035500 Sobic002G025700--Sobic010G035500 Sobic003G359500 Sobic003G359500 Sobic002G025700--Sobic003G359500 Sobic010G207500 Sobic010G207500 Sobic002G025700--Sobic010G207500 Sobic002G354600 Sobic002G354600 Sobic002G025700--Sobic002G354600 Sobic004G165900 Sobic004G165900 Sobic002G025700--Sobic004G165900 Sobic002G025700--Sobic010G205700 Sobic006G193200 Sobic006G193200 Sobic002G025700--Sobic006G193200 Sobic004G089200--Sobic002G025700 Sobic008G157100 Sobic008G157100 Sobic004G089200--Sobic008G157100 Sobic004G089200--Sobic007G149700 Sobic006G025600 Sobic006G025600 Sobic004G089200--Sobic006G025600 Sobic002G044700 Sobic002G044700 Sobic004G089200--Sobic002G044700 Sobic006G276100 Sobic006G276100 Sobic004G089200--Sobic006G276100 Sobic004G089200--Sobic010G205700 Sobic004G089200--Sobic004G300000 Sobic004G089200--Sobic002G354600 Sobic004G300000--Sobic010G035500 Sobic004G300000--Sobic002G025700 Sobic004G300000--Sobic006G193200 Sobic006G214700 Sobic006G214700 Sobic004G300000--Sobic006G214700 Sobic003G108900 Sobic003G108900 Sobic004G300000--Sobic003G108900 Sobic010G197000 Sobic010G197000 Sobic004G300000--Sobic010G197000 Sobic004G300000--Sobic004G165900 Sobic003G014300 Sobic003G014300 Sobic004G300000--Sobic003G014300 Sobic004G300000--Sobic002G354600 Sobic003G306700--Sobic004G300000 Sobic006G201100 Sobic006G201100 Sobic003G306700--Sobic006G201100 Sobic003G306700--Sobic010G035500 Sobic003G306700--Sobic006G214700 Sobic009G079950 Sobic009G079950 Sobic003G306700--Sobic009G079950 Sobic003G306700--Sobic002G025700 Sobic002G331800 Sobic002G331800 Sobic003G306700--Sobic002G331800 Sobic006G110900 Sobic006G110900 Sobic003G306700--Sobic006G110900 Sobic004G164200 Sobic004G164200 Sobic003G306700--Sobic004G164200 Sobic008G065200--Sobic004G268500 Sobic010G193000 Sobic010G193000 Sobic008G065200--Sobic010G193000 Sobic006G123500 Sobic006G123500 Sobic008G065200--Sobic006G123500 Sobic002G362100 Sobic002G362100 Sobic008G065200--Sobic002G362100 Sobic001G404500 Sobic001G404500 Sobic008G065200--Sobic001G404500 Sobic004G099700 Sobic004G099700 Sobic008G065200--Sobic004G099700 Sobic006G258700 Sobic006G258700 Sobic008G065200--Sobic006G258700 Sobic003G255900 Sobic003G255900 Sobic008G065200--Sobic003G255900 Sobic008G065200--Sobic003G014300 Sobic003G190100 Sobic003G190100 Sobic002G173100--Sobic003G190100 Sobic002G173100--Sobic003G108900 Sobic003G203300 Sobic003G203300 Sobic002G173100--Sobic003G203300 Sobic001G060500 Sobic001G060500 Sobic002G173100--Sobic001G060500 Sobic003G190000 Sobic003G190000 Sobic002G173100--Sobic003G190000 Sobic005G075100 Sobic005G075100 Sobic002G173100--Sobic005G075100 Sobic004G271600 Sobic004G271600 Sobic002G173100--Sobic004G271600 Sobic005G179300 Sobic005G179300 Sobic002G173100--Sobic005G179300 Sobic002G173100--Sobic004G300000 Sobic003G080700 Sobic003G080700 Sobic003G080800--Sobic003G080700 Sobic003G080800--Sobic010G205700 Sobic003G080800--Sobic003G014300 Sobic003G080800--Sobic008G065200 Sobic005G175500 Sobic005G175500 Sobic003G080800--Sobic005G175500 Sobic001G413000 Sobic001G413000 Sobic003G080800--Sobic001G413000 Sobic006G060601 Sobic006G060601 Sobic003G080800--Sobic006G060601 Sobic009G019100 Sobic009G019100 Sobic003G080800--Sobic009G019100 Sobic003G080800--Sobic004G300000 Sobic004G268500--Sobic006G123500 Sobic004G268500--Sobic008G065200 Sobic003G284800 Sobic003G284800 Sobic004G268500--Sobic003G284800 Sobic004G268500--Sobic001G404500 Sobic001G071200 Sobic001G071200 Sobic004G268500--Sobic001G071200 Sobic003G292600 Sobic003G292600 Sobic004G268500--Sobic003G292600 Sobic002G046900 Sobic002G046900 Sobic004G268500--Sobic002G046900 Sobic004G268500--Sobic002G025700 Sobic004G268500--Sobic002G362100 Sobic007G149700--Sobic004G089200 Sobic007G149700--Sobic008G157100 Sobic007G149700--Sobic006G025600 Sobic002G077400 Sobic002G077400 Sobic007G149700--Sobic002G077400 Sobic007G149700--Sobic002G044700 Sobic006G177900 Sobic006G177900 Sobic007G149700--Sobic006G177900 Sobic007G149700--Sobic003G190100 Sobic001G126400 Sobic001G126400 Sobic007G149700--Sobic001G126400 Sobic001G009000 Sobic001G009000 Sobic007G149700--Sobic001G009000
Octagon: transcription factors


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