Gene annotation
Transcriptome id Sobic.002G001900.1
Synonym Sb02g000350
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
DUF584 domain containing protein, putative, expressed
UniProt C5X731
Pfam PF04520
Panther DB PTHR33083 PTHR33083:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21930 : Protein of unknown function, DUF584
RAP-DB (Rice) LOC_Os10g33990.1 : DUF584 domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
2 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
3 Sobic.003G223400 down-regulated TF in developmental senescence(PubMedID : 27586543)@expressed protein K09422: transcription factor MYB, plant
4 Sobic.001G314400 OsMADS56 - MADS-box family gene with MIKCc type-box, expressed -
5 Sobic.008G065200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor protein kinase, putative, expressed -
6 Sobic.009G045600 pro-resilin precursor, putative, expressed -
7 Sobic.003G255900 expressed protein -
8 Sobic.006G055000 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -
10 Sobic.002G136100 genetic modifier, putative, expressed -
11 Sobic.008G157600 BURP domain containing protein, expressed -
12 Sobic.003G397600 expressed protein -
13 Sobic.010G229450 - -
14 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
15 Sobic.009G207900 expressed protein -
16 Sobic.006G212800 expressed protein -
17 Sobic.009G023401 - -
18 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
19 Sobic.010G205700 Leucine Rich Repeat family protein, expressed -
20 Sobic.006G130000 STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed K13436: pto-interacting protein 1


Gene co-expression network
sample Sobic002G001900 Sobic002G001900 Sobic006G123500 Sobic006G123500 Sobic002G001900--Sobic006G123500 Sobic004G268500 Sobic004G268500 Sobic002G001900--Sobic004G268500 Sobic003G223400 Sobic003G223400 Sobic002G001900--Sobic003G223400 Sobic001G314400 Sobic001G314400 Sobic002G001900--Sobic001G314400 Sobic008G065200 Sobic008G065200 Sobic002G001900--Sobic008G065200 Sobic009G045600 Sobic009G045600 Sobic002G001900--Sobic009G045600 Sobic003G255900 Sobic003G255900 Sobic002G001900--Sobic003G255900 Sobic006G055000 Sobic006G055000 Sobic002G001900--Sobic006G055000 Sobic004G099700 Sobic004G099700 Sobic002G001900--Sobic004G099700 Sobic006G123500--Sobic004G268500 Sobic001G404500 Sobic001G404500 Sobic006G123500--Sobic001G404500 Sobic006G123500--Sobic004G099700 Sobic005G187900 Sobic005G187900 Sobic006G123500--Sobic005G187900 Sobic003G284800 Sobic003G284800 Sobic006G123500--Sobic003G284800 Sobic002G046900 Sobic002G046900 Sobic006G123500--Sobic002G046900 Sobic004G063200 Sobic004G063200 Sobic006G123500--Sobic004G063200 Sobic006G123500--Sobic008G065200 Sobic006G123500--Sobic002G001900 Sobic004G268500--Sobic006G123500 Sobic004G268500--Sobic008G065200 Sobic004G268500--Sobic003G284800 Sobic004G268500--Sobic001G404500 Sobic001G071200 Sobic001G071200 Sobic004G268500--Sobic001G071200 Sobic003G292600 Sobic003G292600 Sobic004G268500--Sobic003G292600 Sobic004G268500--Sobic002G046900 Sobic002G025700 Sobic002G025700 Sobic004G268500--Sobic002G025700 Sobic002G362100 Sobic002G362100 Sobic004G268500--Sobic002G362100 Sobic009G207900 Sobic009G207900 Sobic003G223400--Sobic009G207900 Sobic004G179400 Sobic004G179400 Sobic003G223400--Sobic004G179400 Sobic006G026100 Sobic006G026100 Sobic003G223400--Sobic006G026100 Sobic007G107700 Sobic007G107700 Sobic003G223400--Sobic007G107700 Sobic006G212800 Sobic006G212800 Sobic003G223400--Sobic006G212800 Sobic003G327000 Sobic003G327000 Sobic003G223400--Sobic003G327000 Sobic003G223400--Sobic003G284800 Sobic009G062400 Sobic009G062400 Sobic003G223400--Sobic009G062400 Sobic003G223400--Sobic002G001900 Sobic001G314400--Sobic002G001900 Sobic003G397600 Sobic003G397600 Sobic001G314400--Sobic003G397600 Sobic005G142700 Sobic005G142700 Sobic001G314400--Sobic005G142700 Sobic001G314400--Sobic003G223400 Sobic003G329700 Sobic003G329700 Sobic001G314400--Sobic003G329700 Sobic001G448300 Sobic001G448300 Sobic001G314400--Sobic001G448300 Sobic002G272700 Sobic002G272700 Sobic001G314400--Sobic002G272700 Sobic006G036300 Sobic006G036300 Sobic001G314400--Sobic006G036300 Sobic001G314400--Sobic006G123500 Sobic008G065200--Sobic004G268500 Sobic010G193000 Sobic010G193000 Sobic008G065200--Sobic010G193000 Sobic008G065200--Sobic006G123500 Sobic008G065200--Sobic002G362100 Sobic008G065200--Sobic001G404500 Sobic008G065200--Sobic004G099700 Sobic006G258700 Sobic006G258700 Sobic008G065200--Sobic006G258700 Sobic008G065200--Sobic003G255900 Sobic003G014300 Sobic003G014300 Sobic008G065200--Sobic003G014300 Sobic009G045600--Sobic003G327000 Sobic003G403900 Sobic003G403900 Sobic009G045600--Sobic003G403900 Sobic001G180200 Sobic001G180200 Sobic009G045600--Sobic001G180200 Sobic003G203000 Sobic003G203000 Sobic009G045600--Sobic003G203000 Sobic004G223400 Sobic004G223400 Sobic009G045600--Sobic004G223400 Sobic010G138800 Sobic010G138800 Sobic009G045600--Sobic010G138800 Sobic009G250400 Sobic009G250400 Sobic009G045600--Sobic009G250400 Sobic009G133700 Sobic009G133700 Sobic009G045600--Sobic009G133700 Sobic003G026600 Sobic003G026600 Sobic009G045600--Sobic003G026600 Sobic003G255900--Sobic003G026600 Sobic003G255900--Sobic006G055000 Sobic003G255900--Sobic008G065200 Sobic003G255900--Sobic004G099700 Sobic007G141700 Sobic007G141700 Sobic003G255900--Sobic007G141700 Sobic003G255900--Sobic004G268500 Sobic005G203300 Sobic005G203300 Sobic003G255900--Sobic005G203300 Sobic003G255900--Sobic006G123500 Sobic002G136100 Sobic002G136100 Sobic003G255900--Sobic002G136100 Sobic006G055000--Sobic005G187900 Sobic009G140000 Sobic009G140000 Sobic006G055000--Sobic009G140000 Sobic002G232200 Sobic002G232200 Sobic006G055000--Sobic002G232200 Sobic008G157600 Sobic008G157600 Sobic006G055000--Sobic008G157600 Sobic006G055000--Sobic003G255900 Sobic006G260800 Sobic006G260800 Sobic006G055000--Sobic006G260800 Sobic004G298900 Sobic004G298900 Sobic006G055000--Sobic004G298900 Sobic006G055000--Sobic004G268500 Sobic006G055000--Sobic009G062400 Sobic004G099700--Sobic006G123500 Sobic004G099700--Sobic001G404500 Sobic007G025900 Sobic007G025900 Sobic004G099700--Sobic007G025900 Sobic008G060300 Sobic008G060300 Sobic004G099700--Sobic008G060300 Sobic004G099700--Sobic004G063200 Sobic003G410900 Sobic003G410900 Sobic004G099700--Sobic003G410900 Sobic004G099700--Sobic008G065200 Sobic006G164300 Sobic006G164300 Sobic004G099700--Sobic006G164300 Sobic004G099700--Sobic010G193000
Octagon: transcription factors


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