Gene annotation
Transcriptome id Sobic.010G229450.1
Synonym -
Functional annotation -
UniProt A0A1W0VUE9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G023401 - -
2 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
3 Sobic.003G014300 expressed protein -
4 Sobic.004G298900 OR, putative, expressed -
5 Sobic.003G223400 down-regulated TF in developmental senescence(PubMedID : 27586543)@expressed protein K09422: transcription factor MYB, plant
6 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
7 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
8 Sobic.006G260800 phosphatidate cytidylyltransferase, putative, expressed K18678: phytol kinase
9 Sobic.006G055000 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.002G001900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
11 Sobic.003G037300 Twin LOV 1, putative, expressed -
12 Sobic.002G362100 expressed protein -
13 Sobic.001G420400 tRNA synthetases class II domain containing protein, expressed K01893: NARS, asparaginyl-tRNA synthetase
14 Sobic.009G143500 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
15 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
16 Sobic.004G211600 psaB translation factor, putative, expressed -
17 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
18 Sobic.006G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed -
19 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
20 Sobic.001G071200 - -


Gene co-expression network
sample Sobic010G229450 Sobic010G229450 Sobic009G023401 Sobic009G023401 Sobic010G229450--Sobic009G023401 Sobic004G179400 Sobic004G179400 Sobic010G229450--Sobic004G179400 Sobic003G014300 Sobic003G014300 Sobic010G229450--Sobic003G014300 Sobic004G298900 Sobic004G298900 Sobic010G229450--Sobic004G298900 Sobic003G223400 Sobic003G223400 Sobic010G229450--Sobic003G223400 Sobic006G258700 Sobic006G258700 Sobic010G229450--Sobic006G258700 Sobic004G268500 Sobic004G268500 Sobic010G229450--Sobic004G268500 Sobic006G260800 Sobic006G260800 Sobic010G229450--Sobic006G260800 Sobic006G055000 Sobic006G055000 Sobic010G229450--Sobic006G055000 Sobic009G189000 Sobic009G189000 Sobic009G023401--Sobic009G189000 Sobic002G362100 Sobic002G362100 Sobic009G023401--Sobic002G362100 Sobic010G063200 Sobic010G063200 Sobic009G023401--Sobic010G063200 Sobic001G404500 Sobic001G404500 Sobic009G023401--Sobic001G404500 Sobic009G023401--Sobic010G229450 Sobic006G060800 Sobic006G060800 Sobic009G023401--Sobic006G060800 Sobic008G152200 Sobic008G152200 Sobic009G023401--Sobic008G152200 Sobic004G063200 Sobic004G063200 Sobic009G023401--Sobic004G063200 Sobic001G351400 Sobic001G351400 Sobic009G023401--Sobic001G351400 Sobic001G540600 Sobic001G540600 Sobic004G179400--Sobic001G540600 Sobic001G060500 Sobic001G060500 Sobic004G179400--Sobic001G060500 Sobic009G207900 Sobic009G207900 Sobic004G179400--Sobic009G207900 Sobic002G028400 Sobic002G028400 Sobic004G179400--Sobic002G028400 Sobic008G074000 Sobic008G074000 Sobic004G179400--Sobic008G074000 Sobic003G125900 Sobic003G125900 Sobic004G179400--Sobic003G125900 Sobic001G378100 Sobic001G378100 Sobic004G179400--Sobic001G378100 Sobic009G170200 Sobic009G170200 Sobic004G179400--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic004G179400--Sobic001G504400 Sobic003G014300--Sobic006G258700 Sobic003G014300--Sobic004G298900 Sobic010G269400 Sobic010G269400 Sobic003G014300--Sobic010G269400 Sobic004G300000 Sobic004G300000 Sobic003G014300--Sobic004G300000 Sobic003G037300 Sobic003G037300 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic005G175500 Sobic005G175500 Sobic003G014300--Sobic005G175500 Sobic010G035500 Sobic010G035500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500 Sobic004G298900--Sobic003G037300 Sobic009G062400 Sobic009G062400 Sobic004G298900--Sobic009G062400 Sobic004G298900--Sobic006G258700 Sobic008G006100 Sobic008G006100 Sobic004G298900--Sobic008G006100 Sobic004G298900--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic004G298900--Sobic002G102200 Sobic005G111550 Sobic005G111550 Sobic004G298900--Sobic005G111550 Sobic004G298900--Sobic004G151500 Sobic004G298900--Sobic006G260800 Sobic003G223400--Sobic009G207900 Sobic003G223400--Sobic004G179400 Sobic006G026100 Sobic006G026100 Sobic003G223400--Sobic006G026100 Sobic007G107700 Sobic007G107700 Sobic003G223400--Sobic007G107700 Sobic006G212800 Sobic006G212800 Sobic003G223400--Sobic006G212800 Sobic003G327000 Sobic003G327000 Sobic003G223400--Sobic003G327000 Sobic003G284800 Sobic003G284800 Sobic003G223400--Sobic003G284800 Sobic003G223400--Sobic009G062400 Sobic002G001900 Sobic002G001900 Sobic003G223400--Sobic002G001900 Sobic006G258700--Sobic003G014300 Sobic006G258700--Sobic010G269400 Sobic006G258700--Sobic004G298900 Sobic006G258700--Sobic001G351400 Sobic006G258700--Sobic003G037300 Sobic010G189200 Sobic010G189200 Sobic006G258700--Sobic010G189200 Sobic006G258700--Sobic004G300000 Sobic001G286600 Sobic001G286600 Sobic006G258700--Sobic001G286600 Sobic006G258700--Sobic001G404500 Sobic006G123500 Sobic006G123500 Sobic004G268500--Sobic006G123500 Sobic008G065200 Sobic008G065200 Sobic004G268500--Sobic008G065200 Sobic004G268500--Sobic003G284800 Sobic004G268500--Sobic001G404500 Sobic001G071200 Sobic001G071200 Sobic004G268500--Sobic001G071200 Sobic003G292600 Sobic003G292600 Sobic004G268500--Sobic003G292600 Sobic002G046900 Sobic002G046900 Sobic004G268500--Sobic002G046900 Sobic002G025700 Sobic002G025700 Sobic004G268500--Sobic002G025700 Sobic004G268500--Sobic002G362100 Sobic006G260800--Sobic004G298900 Sobic010G214100 Sobic010G214100 Sobic006G260800--Sobic010G214100 Sobic002G112400 Sobic002G112400 Sobic006G260800--Sobic002G112400 Sobic006G260800--Sobic005G111550 Sobic003G160800 Sobic003G160800 Sobic006G260800--Sobic003G160800 Sobic006G260800--Sobic009G062400 Sobic005G001700 Sobic005G001700 Sobic006G260800--Sobic005G001700 Sobic004G211600 Sobic004G211600 Sobic006G260800--Sobic004G211600 Sobic009G140000 Sobic009G140000 Sobic006G260800--Sobic009G140000 Sobic005G187900 Sobic005G187900 Sobic006G055000--Sobic005G187900 Sobic006G055000--Sobic009G140000 Sobic002G232200 Sobic002G232200 Sobic006G055000--Sobic002G232200 Sobic008G157600 Sobic008G157600 Sobic006G055000--Sobic008G157600 Sobic003G255900 Sobic003G255900 Sobic006G055000--Sobic003G255900 Sobic006G055000--Sobic006G260800 Sobic006G055000--Sobic004G298900 Sobic006G055000--Sobic004G268500 Sobic006G055000--Sobic009G062400
Octagon: transcription factors


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