Gene annotation
Transcriptome id Sobic.006G186500.1
Synonym SLAC1, Sb06g026050, RCD3, CDI3, OZS1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed
UniProt A0A1Z5REL8
Pfam PF03595
Panther DB PTHR31269 PTHR31269:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0008308voltage-gated anion channel activity GO:0006873cellular ion homeostasis


Orthologs (automatic annotation)
TAIR AT1G12480 : C4-dicarboxylate transporter/malic acid transport protein
RAP-DB (Rice) LOC_Os04g48530.1 : C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043265 , Zm00025a044733 , Zm00025a036732 , Zm00025a038583 , Zm00025a010131 , Zm00025a028368
Brachypodium KQK07006 , KQK07007 , KQK07008 , KQK07009 , KQK08799 , PNT72420 , KQK08801 , KQK08800 , KQJ84144
Barley HORVU1Hr1G030060.8 , HORVU1Hr1G030060.9 , HORVU1Hr1G030060.2 , HORVU1Hr1G030060.6 , HORVU1Hr1G030060.4 , HORVU2Hr1G094480.1 , HORVU2Hr1G094450.2 , HORVU2Hr1G094450.3 , HORVU2Hr1G094450.1 , HORVU2Hr1G094450.4 , HORVU2Hr1G094450.5 , HORVU3Hr1G030850.1 , HORVU3Hr1G030850.3 , HORVU3Hr1G030850.2 , HORVU3Hr1G055740.4 , HORVU3Hr1G055740.5 , HORVU3Hr1G055740.6 , HORVU3Hr1G055740.7 , HORVU3Hr1G055740.1 , HORVU3Hr1G055740.2 , HORVU3Hr1G030840.2 , HORVU3Hr1G030840.3 , HORVU3Hr1G030840.1 , HORVU1Hr1G030060.10 , HORVU1Hr1G030060.11 , HORVU1Hr1G030060.13 , HORVU3Hr1G055740.14 , HORVU3Hr1G055740.15 , HORVU3Hr1G055740.12 , HORVU3Hr1G055740.13 , HORVU3Hr1G055740.11
Wheat TraesCS3B02G178600 , TraesCS1D02G126500 , TraesCS1A02G127500 , TraesCS3D02G159600 , TraesCS1B02G147400 , TraesCS2A02G398000 , TraesCS3D02G228400 , TraesCS3A02G151400 , TraesCS2B02G416100 , TraesCS3D02G017800 , TraesCS3A02G225100 , TraesCS3B02G254700 , TraesCS2D02G395700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G143500 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
2 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
3 Sobic.009G207900 expressed protein -
4 Sobic.001G504400 expressed protein -
5 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
6 Sobic.007G015500 no apical meristem protein, putative, expressed -
7 Sobic.001G054000 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
8 Sobic.003G203300 stress regulated protein, putative, expressed -
9 Sobic.005G118400 expressed protein -
10 Sobic.007G167100 expressed protein K19373: DnaJ homolog subfamily C member 28
11 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
12 Sobic.002G005600 Aldolase-type TIM barrel family protein(PubMedID : 26465154)@SOR/SNZ family protein, putative, expressed K06215: pdxS, pyridoxal 5'-phosphate synthase pdxS subunit
13 Sobic.010G002700 expressed protein -
14 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
15 Sobic.001G540600 expressed protein -
16 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
17 Sobic.002G258600 expressed protein -
18 Sobic.004G298900 OR, putative, expressed -
19 Sobic.003G037300 Twin LOV 1, putative, expressed -
20 Sobic.001G359300 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic006G186500 Sobic006G186500 Sobic009G143500 Sobic009G143500 Sobic006G186500--Sobic009G143500 Sobic004G179400 Sobic004G179400 Sobic006G186500--Sobic004G179400 Sobic009G207900 Sobic009G207900 Sobic006G186500--Sobic009G207900 Sobic001G504400 Sobic001G504400 Sobic006G186500--Sobic001G504400 Sobic010G043800 Sobic010G043800 Sobic006G186500--Sobic010G043800 Sobic007G015500 Sobic007G015500 Sobic006G186500--Sobic007G015500 Sobic001G054000 Sobic001G054000 Sobic006G186500--Sobic001G054000 Sobic003G203300 Sobic003G203300 Sobic006G186500--Sobic003G203300 Sobic005G118400 Sobic005G118400 Sobic006G186500--Sobic005G118400 Sobic009G143500--Sobic006G186500 Sobic009G143500--Sobic007G015500 Sobic001G003200 Sobic001G003200 Sobic009G143500--Sobic001G003200 Sobic009G143500--Sobic009G207900 Sobic003G014300 Sobic003G014300 Sobic009G143500--Sobic003G014300 Sobic003G343500 Sobic003G343500 Sobic009G143500--Sobic003G343500 Sobic005G110532 Sobic005G110532 Sobic009G143500--Sobic005G110532 Sobic006G258700 Sobic006G258700 Sobic009G143500--Sobic006G258700 Sobic008G094000 Sobic008G094000 Sobic009G143500--Sobic008G094000 Sobic001G540600 Sobic001G540600 Sobic004G179400--Sobic001G540600 Sobic001G060500 Sobic001G060500 Sobic004G179400--Sobic001G060500 Sobic004G179400--Sobic009G207900 Sobic002G028400 Sobic002G028400 Sobic004G179400--Sobic002G028400 Sobic008G074000 Sobic008G074000 Sobic004G179400--Sobic008G074000 Sobic003G125900 Sobic003G125900 Sobic004G179400--Sobic003G125900 Sobic001G378100 Sobic001G378100 Sobic004G179400--Sobic001G378100 Sobic009G170200 Sobic009G170200 Sobic004G179400--Sobic009G170200 Sobic004G179400--Sobic001G504400 Sobic006G212800 Sobic006G212800 Sobic009G207900--Sobic006G212800 Sobic001G180200 Sobic001G180200 Sobic009G207900--Sobic001G180200 Sobic002G206300 Sobic002G206300 Sobic009G207900--Sobic002G206300 Sobic009G207900--Sobic001G504400 Sobic009G219100 Sobic009G219100 Sobic009G207900--Sobic009G219100 Sobic007G135800 Sobic007G135800 Sobic009G207900--Sobic007G135800 Sobic009G038701 Sobic009G038701 Sobic009G207900--Sobic009G038701 Sobic003G073800 Sobic003G073800 Sobic009G207900--Sobic003G073800 Sobic009G062400 Sobic009G062400 Sobic009G207900--Sobic009G062400 Sobic001G504400--Sobic002G206300 Sobic007G103400 Sobic007G103400 Sobic001G504400--Sobic007G103400 Sobic001G504400--Sobic009G038701 Sobic003G185900 Sobic003G185900 Sobic001G504400--Sobic003G185900 Sobic001G258200 Sobic001G258200 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic008G033000 Sobic008G033000 Sobic001G504400--Sobic008G033000 Sobic001G504400--Sobic001G180200 Sobic001G504400--Sobic001G378100 Sobic009G121000 Sobic009G121000 Sobic010G043800--Sobic009G121000 Sobic007G136200 Sobic007G136200 Sobic010G043800--Sobic007G136200 Sobic010G043800--Sobic001G504400 Sobic006G142600 Sobic006G142600 Sobic010G043800--Sobic006G142600 Sobic010G002700 Sobic010G002700 Sobic010G043800--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic010G043800--Sobic006G158100 Sobic010G043800--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic010G043800--Sobic001G169900 Sobic010G043800--Sobic001G378100 Sobic001G286600 Sobic001G286600 Sobic007G015500--Sobic001G286600 Sobic001G423400 Sobic001G423400 Sobic007G015500--Sobic001G423400 Sobic002G136100 Sobic002G136100 Sobic007G015500--Sobic002G136100 Sobic007G015500--Sobic009G219100 Sobic004G154400 Sobic004G154400 Sobic007G015500--Sobic004G154400 Sobic007G015500--Sobic009G207900 Sobic002G258600 Sobic002G258600 Sobic007G015500--Sobic002G258600 Sobic006G158700 Sobic006G158700 Sobic007G015500--Sobic006G158700 Sobic009G237000 Sobic009G237000 Sobic007G015500--Sobic009G237000 Sobic002G005600 Sobic002G005600 Sobic001G054000--Sobic002G005600 Sobic003G003450 Sobic003G003450 Sobic001G054000--Sobic003G003450 Sobic003G220100 Sobic003G220100 Sobic001G054000--Sobic003G220100 Sobic001G054000--Sobic001G540600 Sobic001G054000--Sobic010G043800 Sobic001G054000--Sobic001G169900 Sobic009G103000 Sobic009G103000 Sobic001G054000--Sobic009G103000 Sobic001G394800 Sobic001G394800 Sobic001G054000--Sobic001G394800 Sobic001G054000--Sobic009G207900 Sobic006G232600 Sobic006G232600 Sobic003G203300--Sobic006G232600 Sobic003G203300--Sobic008G074000 Sobic003G203300--Sobic001G378100 Sobic009G093100 Sobic009G093100 Sobic003G203300--Sobic009G093100 Sobic003G203300--Sobic009G170200 Sobic003G203300--Sobic001G504400 Sobic002G081400 Sobic002G081400 Sobic003G203300--Sobic002G081400 Sobic006G233700 Sobic006G233700 Sobic003G203300--Sobic006G233700 Sobic004G207400 Sobic004G207400 Sobic003G203300--Sobic004G207400 Sobic005G118400--Sobic010G002700 Sobic005G068700 Sobic005G068700 Sobic005G118400--Sobic005G068700 Sobic005G118400--Sobic001G378100 Sobic005G118400--Sobic001G540600 Sobic005G118400--Sobic003G185900 Sobic005G118400--Sobic001G504400 Sobic005G118400--Sobic008G033000 Sobic001G530900 Sobic001G530900 Sobic005G118400--Sobic001G530900 Sobic002G056500 Sobic002G056500 Sobic005G118400--Sobic002G056500
Octagon: transcription factors


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