Gene annotation
Transcriptome id Sobic.001G540600.2
Synonym Sb01g050290
Functional annotation expressed protein
UniProt A0A1Z5SCG1
Pfam PF01062
Panther DB PTHR33281 PTHR33281:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G61320 : Bestrophin-like protein
RAP-DB (Rice) LOC_Os03g01570.2 : expressed protein
MaizeGDB (Corn) Zm00025a000135
Brachypodium KQK24109
Barley HORVU4Hr1G087350.8 , HORVU4Hr1G087350.3 , HORVU4Hr1G087350.2 , HORVU4Hr1G087350.1 , HORVU4Hr1G087350.7 , HORVU4Hr1G087350.6 , HORVU4Hr1G087350.5 , HORVU4Hr1G087350.4
Wheat TraesCS5A02G532600 , TraesCSU02G139400 , TraesCS4B02G364300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
2 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
3 Sobic.001G077300 thioredoxin, putative, expressed -
4 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
5 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
6 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
7 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
8 Sobic.009G207900 expressed protein -
9 Sobic.003G073800 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
10 Sobic.006G212800 expressed protein -
11 Sobic.001G504400 expressed protein -
12 Sobic.001G536700 expressed protein -
13 Sobic.007G133000 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
14 Sobic.004G019800 MATE domain containing protein, expressed -
15 Sobic.005G118400 expressed protein -
16 Sobic.002G324400 PPDK-RP(PubMedID : 19549309)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
17 Sobic.001G180200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
18 Sobic.002G028400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
19 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
20 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G540600 Sobic001G540600 Sobic001G378100 Sobic001G378100 Sobic001G540600--Sobic001G378100 Sobic001G217900 Sobic001G217900 Sobic001G540600--Sobic001G217900 Sobic001G077300 Sobic001G077300 Sobic001G540600--Sobic001G077300 Sobic009G170200 Sobic009G170200 Sobic001G540600--Sobic009G170200 Sobic002G206300 Sobic002G206300 Sobic001G540600--Sobic002G206300 Sobic010G231300 Sobic010G231300 Sobic001G540600--Sobic010G231300 Sobic004G179400 Sobic004G179400 Sobic001G540600--Sobic004G179400 Sobic009G207900 Sobic009G207900 Sobic001G540600--Sobic009G207900 Sobic003G073800 Sobic003G073800 Sobic001G540600--Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G378100--Sobic001G217900 Sobic001G504400 Sobic001G504400 Sobic001G378100--Sobic001G504400 Sobic001G378100--Sobic001G077300 Sobic001G378100--Sobic001G540600 Sobic001G536700 Sobic001G536700 Sobic001G378100--Sobic001G536700 Sobic006G232600 Sobic006G232600 Sobic001G378100--Sobic006G232600 Sobic001G378100--Sobic009G170200 Sobic001G258200 Sobic001G258200 Sobic001G378100--Sobic001G258200 Sobic007G058100 Sobic007G058100 Sobic001G217900--Sobic007G058100 Sobic001G217900--Sobic010G231300 Sobic008G129900 Sobic008G129900 Sobic001G217900--Sobic008G129900 Sobic001G217900--Sobic001G378100 Sobic001G217900--Sobic001G258200 Sobic001G217900--Sobic002G206300 Sobic001G263100 Sobic001G263100 Sobic001G217900--Sobic001G263100 Sobic008G033000 Sobic008G033000 Sobic001G217900--Sobic008G033000 Sobic001G217900--Sobic001G540600 Sobic009G073900 Sobic009G073900 Sobic001G077300--Sobic009G073900 Sobic006G090100 Sobic006G090100 Sobic001G077300--Sobic006G090100 Sobic006G235400 Sobic006G235400 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic003G341300 Sobic003G341300 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic003G070900 Sobic003G070900 Sobic009G170200--Sobic003G070900 Sobic009G170200--Sobic006G232600 Sobic007G087100 Sobic007G087100 Sobic009G170200--Sobic007G087100 Sobic004G103300 Sobic004G103300 Sobic009G170200--Sobic004G103300 Sobic002G133900 Sobic002G133900 Sobic009G170200--Sobic002G133900 Sobic009G170200--Sobic001G077300 Sobic004G353100 Sobic004G353100 Sobic009G170200--Sobic004G353100 Sobic009G170200--Sobic001G378100 Sobic007G103400 Sobic007G103400 Sobic009G170200--Sobic007G103400 Sobic009G038701 Sobic009G038701 Sobic002G206300--Sobic009G038701 Sobic002G206300--Sobic001G504400 Sobic001G180200 Sobic001G180200 Sobic002G206300--Sobic001G180200 Sobic002G206300--Sobic001G536700 Sobic002G206300--Sobic009G207900 Sobic002G206300--Sobic001G258200 Sobic002G206300--Sobic008G129900 Sobic002G206300--Sobic001G217900 Sobic002G206300--Sobic003G341300 Sobic010G231300--Sobic008G129900 Sobic010G231300--Sobic006G235400 Sobic010G231300--Sobic001G217900 Sobic010G231300--Sobic001G263100 Sobic006G161500 Sobic006G161500 Sobic010G231300--Sobic006G161500 Sobic007G133000 Sobic007G133000 Sobic010G231300--Sobic007G133000 Sobic010G231300--Sobic003G341300 Sobic010G231300--Sobic001G180200 Sobic002G162400 Sobic002G162400 Sobic010G231300--Sobic002G162400 Sobic004G179400--Sobic001G540600 Sobic001G060500 Sobic001G060500 Sobic004G179400--Sobic001G060500 Sobic004G179400--Sobic009G207900 Sobic002G028400 Sobic002G028400 Sobic004G179400--Sobic002G028400 Sobic008G074000 Sobic008G074000 Sobic004G179400--Sobic008G074000 Sobic003G125900 Sobic003G125900 Sobic004G179400--Sobic003G125900 Sobic004G179400--Sobic001G378100 Sobic004G179400--Sobic009G170200 Sobic004G179400--Sobic001G504400 Sobic009G207900--Sobic006G212800 Sobic009G207900--Sobic001G180200 Sobic009G207900--Sobic002G206300 Sobic009G207900--Sobic001G504400 Sobic009G219100 Sobic009G219100 Sobic009G207900--Sobic009G219100 Sobic007G135800 Sobic007G135800 Sobic009G207900--Sobic007G135800 Sobic009G207900--Sobic009G038701 Sobic009G207900--Sobic003G073800 Sobic009G062400 Sobic009G062400 Sobic009G207900--Sobic009G062400 Sobic003G073800--Sobic001G378100 Sobic003G073800--Sobic001G077300 Sobic003G073800--Sobic001G180200 Sobic003G073800--Sobic009G207900 Sobic003G073800--Sobic001G536700 Sobic003G073800--Sobic009G073900 Sobic003G073800--Sobic006G090100 Sobic003G073800--Sobic007G058100 Sobic003G073800--Sobic002G206300
Octagon: transcription factors


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