Gene annotation
Transcriptome id Sobic.002G324400.1
Synonym PPDK RP1;PPDK-rp/2, ATRP1, RP1, Sb02g035190
Functional annotation PPDK-RP (PubMedID : 19549309)
- (PubMedID : 26976818)
pyruvate orthophosphate dikinase regulatory protein (PubMedID : 27016024)
pyruvate Pi dikinase regulatory protein, putative, expressed
UniProt A0A1W0W6N8
Pfam PF03618
Panther DB PTHR31756:SF3 PTHR31756
NCBI CDD -
KEGG Orthology K09773; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
Gene Ontology GO:0005524; ATP binding GO:0016772transferase activity, transferring phosphorus-containing groups


Orthologs (automatic annotation)
TAIR AT4G21210 : PPDK regulatory protein
RAP-DB (Rice) LOC_Os07g34640.2 : pyruvate Pi dikinase regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a048267 , Zm00025a014822
Brachypodium KQK15920
Barley HORVU2Hr1G045170.7 , HORVU2Hr1G045170.6 , HORVU2Hr1G045170.5 , HORVU2Hr1G045170.4 , HORVU2Hr1G045170.3 , HORVU2Hr1G045170.2 , HORVU2Hr1G045170.1 , HORVU2Hr1G045170.9 , HORVU2Hr1G045170.12 , HORVU2Hr1G045170.11 , HORVU2Hr1G045170.10 , HORVU2Hr1G045150.4 , HORVU2Hr1G045150.1 , HORVU2Hr1G045150.3 , HORVU2Hr1G045150.2
Wheat TraesCS2D02G224800 , TraesCS2D02G224800 , TraesCS2A02G218600 , TraesCS2B02G244000
Populus -


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cDNA sequences
Sobic.002G324400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G540600 expressed protein -
2 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
3 Sobic.003G233700 SET domain-containing protein, putative, expressed -
4 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
5 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
6 Sobic.009G132000 expressed protein -
7 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
8 Sobic.002G028400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
9 Sobic.005G063000 short chain dehydrogenase/reductase protein, putative, expressed -
10 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
11 Sobic.010G125833 - -
12 Sobic.007G133000 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
13 Sobic.001G504400 expressed protein -
14 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
15 Sobic.001G536700 expressed protein -
16 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
17 Sobic.001G521200 expressed protein -
18 Sobic.003G306200 hemimethylated DNA binding domain containing protein, expressed -
19 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
20 Sobic.004G165500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G324400 Sobic002G324400 Sobic001G540600 Sobic001G540600 Sobic002G324400--Sobic001G540600 Sobic002G206300 Sobic002G206300 Sobic002G324400--Sobic002G206300 Sobic003G233700 Sobic003G233700 Sobic002G324400--Sobic003G233700 Sobic001G217900 Sobic001G217900 Sobic002G324400--Sobic001G217900 Sobic004G179400 Sobic004G179400 Sobic002G324400--Sobic004G179400 Sobic009G132000 Sobic009G132000 Sobic002G324400--Sobic009G132000 Sobic008G033000 Sobic008G033000 Sobic002G324400--Sobic008G033000 Sobic002G028400 Sobic002G028400 Sobic002G324400--Sobic002G028400 Sobic005G063000 Sobic005G063000 Sobic002G324400--Sobic005G063000 Sobic001G378100 Sobic001G378100 Sobic001G540600--Sobic001G378100 Sobic001G540600--Sobic001G217900 Sobic001G077300 Sobic001G077300 Sobic001G540600--Sobic001G077300 Sobic009G170200 Sobic009G170200 Sobic001G540600--Sobic009G170200 Sobic001G540600--Sobic002G206300 Sobic010G231300 Sobic010G231300 Sobic001G540600--Sobic010G231300 Sobic001G540600--Sobic004G179400 Sobic009G207900 Sobic009G207900 Sobic001G540600--Sobic009G207900 Sobic003G073800 Sobic003G073800 Sobic001G540600--Sobic003G073800 Sobic009G038701 Sobic009G038701 Sobic002G206300--Sobic009G038701 Sobic001G504400 Sobic001G504400 Sobic002G206300--Sobic001G504400 Sobic001G180200 Sobic001G180200 Sobic002G206300--Sobic001G180200 Sobic001G536700 Sobic001G536700 Sobic002G206300--Sobic001G536700 Sobic002G206300--Sobic009G207900 Sobic001G258200 Sobic001G258200 Sobic002G206300--Sobic001G258200 Sobic008G129900 Sobic008G129900 Sobic002G206300--Sobic008G129900 Sobic002G206300--Sobic001G217900 Sobic003G341300 Sobic003G341300 Sobic002G206300--Sobic003G341300 Sobic007G103400 Sobic007G103400 Sobic003G233700--Sobic007G103400 Sobic003G287900 Sobic003G287900 Sobic003G233700--Sobic003G287900 Sobic004G353100 Sobic004G353100 Sobic003G233700--Sobic004G353100 Sobic002G133900 Sobic002G133900 Sobic003G233700--Sobic002G133900 Sobic009G237000 Sobic009G237000 Sobic003G233700--Sobic009G237000 Sobic003G160800 Sobic003G160800 Sobic003G233700--Sobic003G160800 Sobic008G074000 Sobic008G074000 Sobic003G233700--Sobic008G074000 Sobic003G094350 Sobic003G094350 Sobic003G233700--Sobic003G094350 Sobic001G500600 Sobic001G500600 Sobic003G233700--Sobic001G500600 Sobic007G058100 Sobic007G058100 Sobic001G217900--Sobic007G058100 Sobic001G217900--Sobic010G231300 Sobic001G217900--Sobic008G129900 Sobic001G217900--Sobic001G378100 Sobic001G217900--Sobic001G258200 Sobic001G217900--Sobic002G206300 Sobic001G263100 Sobic001G263100 Sobic001G217900--Sobic001G263100 Sobic001G217900--Sobic008G033000 Sobic001G217900--Sobic001G540600 Sobic004G179400--Sobic001G540600 Sobic001G060500 Sobic001G060500 Sobic004G179400--Sobic001G060500 Sobic004G179400--Sobic009G207900 Sobic004G179400--Sobic002G028400 Sobic004G179400--Sobic008G074000 Sobic003G125900 Sobic003G125900 Sobic004G179400--Sobic003G125900 Sobic004G179400--Sobic001G378100 Sobic004G179400--Sobic009G170200 Sobic004G179400--Sobic001G504400 Sobic003G005000 Sobic003G005000 Sobic009G132000--Sobic003G005000 Sobic007G166300 Sobic007G166300 Sobic009G132000--Sobic007G166300 Sobic009G132000--Sobic004G353100 Sobic003G094100 Sobic003G094100 Sobic009G132000--Sobic003G094100 Sobic007G108900 Sobic007G108900 Sobic009G132000--Sobic007G108900 Sobic004G103300 Sobic004G103300 Sobic009G132000--Sobic004G103300 Sobic001G509200 Sobic001G509200 Sobic009G132000--Sobic001G509200 Sobic009G132000--Sobic009G170200 Sobic007G157300 Sobic007G157300 Sobic009G132000--Sobic007G157300 Sobic003G185900 Sobic003G185900 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic008G033000--Sobic001G217900 Sobic010G125833 Sobic010G125833 Sobic008G033000--Sobic010G125833 Sobic008G033000--Sobic002G206300 Sobic004G215800 Sobic004G215800 Sobic008G033000--Sobic004G215800 Sobic008G033000--Sobic009G038701 Sobic002G028400--Sobic002G133900 Sobic002G028400--Sobic003G094350 Sobic002G028400--Sobic001G500600 Sobic003G070900 Sobic003G070900 Sobic002G028400--Sobic003G070900 Sobic002G028400--Sobic009G170200 Sobic002G028400--Sobic008G074000 Sobic002G028400--Sobic001G540600 Sobic002G028400--Sobic003G287900 Sobic002G028400--Sobic007G103400 Sobic004G211600 Sobic004G211600 Sobic005G063000--Sobic004G211600 Sobic005G204200 Sobic005G204200 Sobic005G063000--Sobic005G204200 Sobic009G121000 Sobic009G121000 Sobic005G063000--Sobic009G121000 Sobic005G001700 Sobic005G001700 Sobic005G063000--Sobic005G001700 Sobic003G085100 Sobic003G085100 Sobic005G063000--Sobic003G085100 Sobic005G063000--Sobic003G160800 Sobic010G214100 Sobic010G214100 Sobic005G063000--Sobic010G214100 Sobic005G063000--Sobic007G103400 Sobic010G043800 Sobic010G043800 Sobic005G063000--Sobic010G043800
Octagon: transcription factors


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