Gene annotation
Transcriptome id Sobic.006G130000.1
Synonym Sb06g020980
Functional annotation STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed
UniProt C5YBC5
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF128
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K13436; pto-interacting protein 1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G59350 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os04g41310.1 : STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a029688 , Zm00025a012726 , Zm00025a010905 , Zm00025a049886 , Zm00025a049884 , Zm00025a049889 , Zm00025a011296
Brachypodium KQJ82756 , KQK00402 , KQJ88913 , KQJ83300 , PNT61355
Barley HORVU3Hr1G022780.5 , HORVU3Hr1G022780.9 , HORVU2Hr1G076720.1 , HORVU4Hr1G016080.1 , HORVU3Hr1G064110.12 , HORVU3Hr1G064110.5
Wheat TraesCS2B02G366600 , TraesCS2D02G346600 , TraesCS2A02G348200
Populus -


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cDNA sequences
Sobic.006G130000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G064200 expressed protein -
2 Sobic.006G055000 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.008G033200 stem-specific protein TSJT1, putative, expressed -
4 Sobic.002G201900 transporter family protein, putative, expressed -
5 Sobic.002G200700 expressed protein -
6 Sobic.005G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
7 Sobic.007G141700 hcr2-5D, putative, expressed -
8 Sobic.002G232200 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
9 Sobic.003G224100 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
10 Sobic.003G255900 expressed protein -
11 Sobic.004G255600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@neutral/alkaline invertase, putative, expressed -
12 Sobic.009G207900 expressed protein -
13 Sobic.006G011300 membrane related protein CP5, putative, expressed -
14 Sobic.003G334000 expressed protein -
15 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
16 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
17 Sobic.003G010200 cytochrome P450, putative, expressed -
18 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
19 Sobic.002G005600 Aldolase-type TIM barrel family protein(PubMedID : 26465154)@SOR/SNZ family protein, putative, expressed K06215: pdxS, pyridoxal 5'-phosphate synthase pdxS subunit
20 Sobic.010G181100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD binding domain containing protein, expressed -


Gene co-expression network
sample Sobic006G130000 Sobic006G130000 Sobic006G064200 Sobic006G064200 Sobic006G130000--Sobic006G064200 Sobic006G055000 Sobic006G055000 Sobic006G130000--Sobic006G055000 Sobic008G033200 Sobic008G033200 Sobic006G130000--Sobic008G033200 Sobic002G201900 Sobic002G201900 Sobic006G130000--Sobic002G201900 Sobic002G200700 Sobic002G200700 Sobic006G130000--Sobic002G200700 Sobic005G089600 Sobic005G089600 Sobic006G130000--Sobic005G089600 Sobic007G141700 Sobic007G141700 Sobic006G130000--Sobic007G141700 Sobic002G232200 Sobic002G232200 Sobic006G130000--Sobic002G232200 Sobic003G224100 Sobic003G224100 Sobic006G130000--Sobic003G224100 Sobic006G064200--Sobic006G130000 Sobic006G064200--Sobic002G200700 Sobic004G151500 Sobic004G151500 Sobic006G064200--Sobic004G151500 Sobic006G064200--Sobic003G224100 Sobic006G011300 Sobic006G011300 Sobic006G064200--Sobic006G011300 Sobic006G064200--Sobic002G201900 Sobic003G334000 Sobic003G334000 Sobic006G064200--Sobic003G334000 Sobic006G064200--Sobic005G089600 Sobic004G154400 Sobic004G154400 Sobic006G064200--Sobic004G154400 Sobic005G187900 Sobic005G187900 Sobic006G055000--Sobic005G187900 Sobic009G140000 Sobic009G140000 Sobic006G055000--Sobic009G140000 Sobic006G055000--Sobic002G232200 Sobic008G157600 Sobic008G157600 Sobic006G055000--Sobic008G157600 Sobic003G255900 Sobic003G255900 Sobic006G055000--Sobic003G255900 Sobic006G260800 Sobic006G260800 Sobic006G055000--Sobic006G260800 Sobic004G298900 Sobic004G298900 Sobic006G055000--Sobic004G298900 Sobic004G268500 Sobic004G268500 Sobic006G055000--Sobic004G268500 Sobic009G062400 Sobic009G062400 Sobic006G055000--Sobic009G062400 Sobic003G036200 Sobic003G036200 Sobic008G033200--Sobic003G036200 Sobic002G324500 Sobic002G324500 Sobic008G033200--Sobic002G324500 Sobic004G215800 Sobic004G215800 Sobic008G033200--Sobic004G215800 Sobic006G093100 Sobic006G093100 Sobic008G033200--Sobic006G093100 Sobic006G120500 Sobic006G120500 Sobic008G033200--Sobic006G120500 Sobic002G390100 Sobic002G390100 Sobic008G033200--Sobic002G390100 Sobic008G117000 Sobic008G117000 Sobic008G033200--Sobic008G117000 Sobic007G105500 Sobic007G105500 Sobic008G033200--Sobic007G105500 Sobic003G185900 Sobic003G185900 Sobic008G033200--Sobic003G185900 Sobic002G201900--Sobic002G200700 Sobic007G025900 Sobic007G025900 Sobic002G201900--Sobic007G025900 Sobic002G201900--Sobic006G130000 Sobic003G246200 Sobic003G246200 Sobic002G201900--Sobic003G246200 Sobic006G065900 Sobic006G065900 Sobic002G201900--Sobic006G065900 Sobic002G201900--Sobic006G064200 Sobic003G397600 Sobic003G397600 Sobic002G201900--Sobic003G397600 Sobic002G201900--Sobic003G224100 Sobic002G201900--Sobic007G141700 Sobic002G200700--Sobic003G224100 Sobic002G001000 Sobic002G001000 Sobic002G200700--Sobic002G001000 Sobic002G200700--Sobic002G201900 Sobic003G007700 Sobic003G007700 Sobic002G200700--Sobic003G007700 Sobic002G200700--Sobic006G064200 Sobic010G269400 Sobic010G269400 Sobic002G200700--Sobic010G269400 Sobic002G136100 Sobic002G136100 Sobic002G200700--Sobic002G136100 Sobic002G200700--Sobic006G130000 Sobic006G258700 Sobic006G258700 Sobic002G200700--Sobic006G258700 Sobic003G431700 Sobic003G431700 Sobic005G089600--Sobic003G431700 Sobic003G367500 Sobic003G367500 Sobic005G089600--Sobic003G367500 Sobic008G053200 Sobic008G053200 Sobic005G089600--Sobic008G053200 Sobic003G398800 Sobic003G398800 Sobic005G089600--Sobic003G398800 Sobic005G089600--Sobic002G324500 Sobic003G431900 Sobic003G431900 Sobic005G089600--Sobic003G431900 Sobic001G519800 Sobic001G519800 Sobic005G089600--Sobic001G519800 Sobic002G036000 Sobic002G036000 Sobic005G089600--Sobic002G036000 Sobic003G371250 Sobic003G371250 Sobic005G089600--Sobic003G371250 Sobic010G231200 Sobic010G231200 Sobic007G141700--Sobic010G231200 Sobic009G129300 Sobic009G129300 Sobic007G141700--Sobic009G129300 Sobic003G327000 Sobic003G327000 Sobic007G141700--Sobic003G327000 Sobic007G141700--Sobic003G431700 Sobic007G141700--Sobic005G089600 Sobic007G141700--Sobic009G062400 Sobic004G059800 Sobic004G059800 Sobic007G141700--Sobic004G059800 Sobic007G141700--Sobic003G398800 Sobic001G491000 Sobic001G491000 Sobic007G141700--Sobic001G491000 Sobic002G232200--Sobic008G033200 Sobic002G232200--Sobic006G055000 Sobic002G232200--Sobic006G093100 Sobic002G232200--Sobic002G324500 Sobic002G232200--Sobic003G036200 Sobic005G001700 Sobic005G001700 Sobic002G232200--Sobic005G001700 Sobic001G073900 Sobic001G073900 Sobic002G232200--Sobic001G073900 Sobic003G426700 Sobic003G426700 Sobic002G232200--Sobic003G426700 Sobic002G232200--Sobic008G117000 Sobic003G224100--Sobic002G200700 Sobic003G224100--Sobic006G011300 Sobic003G224100--Sobic002G001000 Sobic001G339500 Sobic001G339500 Sobic003G224100--Sobic001G339500 Sobic006G175800 Sobic006G175800 Sobic003G224100--Sobic006G175800 Sobic003G224100--Sobic006G064200 Sobic008G077500 Sobic008G077500 Sobic003G224100--Sobic008G077500 Sobic001G413000 Sobic001G413000 Sobic003G224100--Sobic001G413000 Sobic003G224100--Sobic006G258700
Octagon: transcription factors


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