Gene annotation
Transcriptome id Sobic.003G334000.1
Synonym Sb03g037890
Functional annotation expressed protein
UniProt C5XN71
Pfam -
Panther DB PTHR33474 PTHR33474:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G47510 : -
RAP-DB (Rice) LOC_Os01g59970.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G334000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.003G381700 DUF647 domain containing protein, putative, expressed -
3 Sobic.003G277600 DNAse I-like superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
4 Sobic.007G062200 expressed protein -
5 Sobic.003G372400 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
6 Sobic.003G051000 expressed protein -
7 Sobic.006G064200 expressed protein -
8 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
9 Sobic.006G130000 STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed K13436: pto-interacting protein 1
10 Sobic.004G269800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
11 Sobic.006G011300 membrane related protein CP5, putative, expressed -
12 Sobic.003G260100 - -
13 Sobic.004G322700 - -
14 Sobic.009G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
15 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
16 Sobic.004G215800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
17 Sobic.003G282000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@suppressor of phythchrome A, putative, expressed -
18 Sobic.002G404800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
19 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
20 Sobic.005G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase


Gene co-expression network
sample Sobic003G334000 Sobic003G334000 Sobic003G339700 Sobic003G339700 Sobic003G334000--Sobic003G339700 Sobic003G381700 Sobic003G381700 Sobic003G334000--Sobic003G381700 Sobic003G277600 Sobic003G277600 Sobic003G334000--Sobic003G277600 Sobic007G062200 Sobic007G062200 Sobic003G334000--Sobic007G062200 Sobic003G372400 Sobic003G372400 Sobic003G334000--Sobic003G372400 Sobic003G051000 Sobic003G051000 Sobic003G334000--Sobic003G051000 Sobic006G064200 Sobic006G064200 Sobic003G334000--Sobic006G064200 Sobic008G077500 Sobic008G077500 Sobic003G334000--Sobic008G077500 Sobic006G130000 Sobic006G130000 Sobic003G334000--Sobic006G130000 Sobic002G417300 Sobic002G417300 Sobic003G339700--Sobic002G417300 Sobic003G339700--Sobic003G381700 Sobic008G187100 Sobic008G187100 Sobic003G339700--Sobic008G187100 Sobic007G146400 Sobic007G146400 Sobic003G339700--Sobic007G146400 Sobic001G160800 Sobic001G160800 Sobic003G339700--Sobic001G160800 Sobic003G339700--Sobic003G334000 Sobic001G057700 Sobic001G057700 Sobic003G339700--Sobic001G057700 Sobic009G069300 Sobic009G069300 Sobic003G339700--Sobic009G069300 Sobic006G066800 Sobic006G066800 Sobic003G339700--Sobic006G066800 Sobic003G381700--Sobic008G187100 Sobic003G381700--Sobic001G057700 Sobic003G381700--Sobic003G339700 Sobic003G264800 Sobic003G264800 Sobic003G381700--Sobic003G264800 Sobic003G373600 Sobic003G373600 Sobic003G381700--Sobic003G373600 Sobic003G381700--Sobic007G146400 Sobic001G276300 Sobic001G276300 Sobic003G381700--Sobic001G276300 Sobic001G333500 Sobic001G333500 Sobic003G381700--Sobic001G333500 Sobic005G106600 Sobic005G106600 Sobic003G381700--Sobic005G106600 Sobic003G277600--Sobic003G372400 Sobic009G246300 Sobic009G246300 Sobic003G277600--Sobic009G246300 Sobic004G165500 Sobic004G165500 Sobic003G277600--Sobic004G165500 Sobic010G104800 Sobic010G104800 Sobic003G277600--Sobic010G104800 Sobic009G048900 Sobic009G048900 Sobic003G277600--Sobic009G048900 Sobic004G112100 Sobic004G112100 Sobic003G277600--Sobic004G112100 Sobic003G139500 Sobic003G139500 Sobic003G277600--Sobic003G139500 Sobic001G043000 Sobic001G043000 Sobic003G277600--Sobic001G043000 Sobic003G042900 Sobic003G042900 Sobic003G277600--Sobic003G042900 Sobic001G498000 Sobic001G498000 Sobic007G062200--Sobic001G498000 Sobic007G062200--Sobic003G334000 Sobic007G062200--Sobic003G051000 Sobic010G251300 Sobic010G251300 Sobic007G062200--Sobic010G251300 Sobic010G102800 Sobic010G102800 Sobic007G062200--Sobic010G102800 Sobic007G062200--Sobic003G339700 Sobic002G200700 Sobic002G200700 Sobic007G062200--Sobic002G200700 Sobic007G062200--Sobic008G077500 Sobic004G207400 Sobic004G207400 Sobic007G062200--Sobic004G207400 Sobic004G215800 Sobic004G215800 Sobic003G372400--Sobic004G215800 Sobic002G056500 Sobic002G056500 Sobic003G372400--Sobic002G056500 Sobic005G231500 Sobic005G231500 Sobic003G372400--Sobic005G231500 Sobic003G097600 Sobic003G097600 Sobic003G372400--Sobic003G097600 Sobic007G105500 Sobic007G105500 Sobic003G372400--Sobic007G105500 Sobic003G314000 Sobic003G314000 Sobic003G372400--Sobic003G314000 Sobic006G093100 Sobic006G093100 Sobic003G372400--Sobic006G093100 Sobic008G129900 Sobic008G129900 Sobic003G372400--Sobic008G129900 Sobic003G371250 Sobic003G371250 Sobic003G372400--Sobic003G371250 Sobic007G164000 Sobic007G164000 Sobic003G051000--Sobic007G164000 Sobic003G051000--Sobic001G057700 Sobic004G169000 Sobic004G169000 Sobic003G051000--Sobic004G169000 Sobic005G084800 Sobic005G084800 Sobic003G051000--Sobic005G084800 Sobic010G236300 Sobic010G236300 Sobic003G051000--Sobic010G236300 Sobic003G051000--Sobic001G498000 Sobic003G043300 Sobic003G043300 Sobic003G051000--Sobic003G043300 Sobic002G187700 Sobic002G187700 Sobic003G051000--Sobic002G187700 Sobic003G355900 Sobic003G355900 Sobic003G051000--Sobic003G355900 Sobic006G064200--Sobic006G130000 Sobic006G064200--Sobic002G200700 Sobic004G151500 Sobic004G151500 Sobic006G064200--Sobic004G151500 Sobic003G224100 Sobic003G224100 Sobic006G064200--Sobic003G224100 Sobic006G011300 Sobic006G011300 Sobic006G064200--Sobic006G011300 Sobic002G201900 Sobic002G201900 Sobic006G064200--Sobic002G201900 Sobic006G064200--Sobic003G334000 Sobic005G089600 Sobic005G089600 Sobic006G064200--Sobic005G089600 Sobic004G154400 Sobic004G154400 Sobic006G064200--Sobic004G154400 Sobic007G090900 Sobic007G090900 Sobic008G077500--Sobic007G090900 Sobic004G268300 Sobic004G268300 Sobic008G077500--Sobic004G268300 Sobic001G243200 Sobic001G243200 Sobic008G077500--Sobic001G243200 Sobic008G052900 Sobic008G052900 Sobic008G077500--Sobic008G052900 Sobic009G103000 Sobic009G103000 Sobic008G077500--Sobic009G103000 Sobic006G212800 Sobic006G212800 Sobic008G077500--Sobic006G212800 Sobic003G157900 Sobic003G157900 Sobic008G077500--Sobic003G157900 Sobic003G260100 Sobic003G260100 Sobic008G077500--Sobic003G260100 Sobic002G162400 Sobic002G162400 Sobic008G077500--Sobic002G162400 Sobic006G130000--Sobic006G064200 Sobic006G055000 Sobic006G055000 Sobic006G130000--Sobic006G055000 Sobic008G033200 Sobic008G033200 Sobic006G130000--Sobic008G033200 Sobic006G130000--Sobic002G201900 Sobic006G130000--Sobic002G200700 Sobic006G130000--Sobic005G089600 Sobic007G141700 Sobic007G141700 Sobic006G130000--Sobic007G141700 Sobic002G232200 Sobic002G232200 Sobic006G130000--Sobic002G232200 Sobic006G130000--Sobic003G224100
Octagon: transcription factors


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