Gene annotation
Transcriptome id Sobic.003G381700.1,Sobic.003G381700.2
Synonym Sb03g042150, EMB1879, RUS6
Functional annotation DUF647 domain containing protein, putative, expressed
UniProt A0A1B6Q7D8
Pfam PF04884
Panther DB PTHR12770 PTHR12770:SF25
NCBI CDD KOG4249; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49820 : Protein of unknown function, DUF647
RAP-DB (Rice) LOC_Os01g66350.1 : DUF647 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a043726 , Zm00025a039482 , Zm00025a026512
Brachypodium KQK10952 , KQK06205 , KQK06206
Barley HORVU3Hr1G090580.8 , HORVU3Hr1G090580.9 , HORVU3Hr1G090580.5 , HORVU3Hr1G090580.4 , HORVU3Hr1G090580.7 , HORVU3Hr1G090580.6 , HORVU3Hr1G090580.1 , HORVU3Hr1G090580.3 , HORVU3Hr1G090580.2 , HORVU3Hr1G090580.12 , HORVU3Hr1G090580.14 , HORVU3Hr1G090580.11 , HORVU3Hr1G090580.10 , HORVU3Hr1G090580.13
Wheat TraesCS3A02G403900 , TraesCS3A02G403900 , TraesCS3B02G437400 , TraesCS3D02G399100
Populus -


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cDNA sequences
Sobic.003G381700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G187100 early-responsive to dehydration protein-related, putative, expressed -
2 Sobic.001G057700 heat stress transcription factor, putative, expressed K09419: heat shock transcription factor, other eukaryote
3 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.003G264800 expressed protein -
5 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
6 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
7 Sobic.001G276300 peptide transporter PTR2, putative, expressed -
8 Sobic.001G333500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
9 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
10 Sobic.004G322700 - -
11 Sobic.003G334000 expressed protein -
12 Sobic.007G058100 light-mediated development protein DET1, putative, expressed K10571: de-etiolated-1
13 Sobic.001G411400 response regulator receiver domain containing protein, expressed K12129: pseudo-response regulator 7
14 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G003450 - K01177: beta-amylase
16 Sobic.007G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
17 Sobic.004G082300 WD domain, G-beta repeat domain containing protein, expressed -
18 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
19 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
20 Sobic.004G269800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase


Gene co-expression network
sample Sobic003G381700 Sobic003G381700 Sobic008G187100 Sobic008G187100 Sobic003G381700--Sobic008G187100 Sobic001G057700 Sobic001G057700 Sobic003G381700--Sobic001G057700 Sobic003G339700 Sobic003G339700 Sobic003G381700--Sobic003G339700 Sobic003G264800 Sobic003G264800 Sobic003G381700--Sobic003G264800 Sobic003G373600 Sobic003G373600 Sobic003G381700--Sobic003G373600 Sobic007G146400 Sobic007G146400 Sobic003G381700--Sobic007G146400 Sobic001G276300 Sobic001G276300 Sobic003G381700--Sobic001G276300 Sobic001G333500 Sobic001G333500 Sobic003G381700--Sobic001G333500 Sobic005G106600 Sobic005G106600 Sobic003G381700--Sobic005G106600 Sobic008G187100--Sobic003G381700 Sobic003G186900 Sobic003G186900 Sobic008G187100--Sobic003G186900 Sobic008G187100--Sobic003G339700 Sobic008G187100--Sobic005G106600 Sobic008G187100--Sobic001G057700 Sobic001G352400 Sobic001G352400 Sobic008G187100--Sobic001G352400 Sobic003G166200 Sobic003G166200 Sobic008G187100--Sobic003G166200 Sobic004G322700 Sobic004G322700 Sobic008G187100--Sobic004G322700 Sobic008G187100--Sobic007G146400 Sobic001G057700--Sobic007G146400 Sobic001G057700--Sobic003G381700 Sobic003G051000 Sobic003G051000 Sobic001G057700--Sobic003G051000 Sobic001G057700--Sobic003G264800 Sobic007G079400 Sobic007G079400 Sobic001G057700--Sobic007G079400 Sobic001G057700--Sobic008G187100 Sobic001G057700--Sobic003G339700 Sobic004G355700 Sobic004G355700 Sobic001G057700--Sobic004G355700 Sobic005G132000 Sobic005G132000 Sobic001G057700--Sobic005G132000 Sobic002G417300 Sobic002G417300 Sobic003G339700--Sobic002G417300 Sobic003G339700--Sobic003G381700 Sobic003G339700--Sobic008G187100 Sobic003G339700--Sobic007G146400 Sobic001G160800 Sobic001G160800 Sobic003G339700--Sobic001G160800 Sobic003G334000 Sobic003G334000 Sobic003G339700--Sobic003G334000 Sobic003G339700--Sobic001G057700 Sobic009G069300 Sobic009G069300 Sobic003G339700--Sobic009G069300 Sobic006G066800 Sobic006G066800 Sobic003G339700--Sobic006G066800 Sobic003G264800--Sobic003G186900 Sobic003G003450 Sobic003G003450 Sobic003G264800--Sobic003G003450 Sobic006G232600 Sobic006G232600 Sobic003G264800--Sobic006G232600 Sobic003G264800--Sobic005G106600 Sobic002G072400 Sobic002G072400 Sobic003G264800--Sobic002G072400 Sobic009G103000 Sobic009G103000 Sobic003G264800--Sobic009G103000 Sobic004G238200 Sobic004G238200 Sobic003G264800--Sobic004G238200 Sobic004G207400 Sobic004G207400 Sobic003G264800--Sobic004G207400 Sobic004G337400 Sobic004G337400 Sobic003G264800--Sobic004G337400 Sobic003G157900 Sobic003G157900 Sobic003G373600--Sobic003G157900 Sobic005G062700 Sobic005G062700 Sobic003G373600--Sobic005G062700 Sobic003G425300 Sobic003G425300 Sobic003G373600--Sobic003G425300 Sobic003G373600--Sobic003G381700 Sobic005G172400 Sobic005G172400 Sobic003G373600--Sobic005G172400 Sobic003G373600--Sobic001G276300 Sobic003G373600--Sobic007G079400 Sobic008G077500 Sobic008G077500 Sobic003G373600--Sobic008G077500 Sobic003G373600--Sobic008G187100 Sobic007G146400--Sobic001G057700 Sobic007G146400--Sobic005G132000 Sobic006G257800 Sobic006G257800 Sobic007G146400--Sobic006G257800 Sobic002G383600 Sobic002G383600 Sobic007G146400--Sobic002G383600 Sobic006G051800 Sobic006G051800 Sobic007G146400--Sobic006G051800 Sobic009G074400 Sobic009G074400 Sobic007G146400--Sobic009G074400 Sobic004G231900 Sobic004G231900 Sobic007G146400--Sobic004G231900 Sobic007G146400--Sobic003G339700 Sobic007G146400--Sobic002G417300 Sobic007G135800 Sobic007G135800 Sobic001G276300--Sobic007G135800 Sobic001G509200 Sobic001G509200 Sobic001G276300--Sobic001G509200 Sobic005G028800 Sobic005G028800 Sobic001G276300--Sobic005G028800 Sobic006G213700 Sobic006G213700 Sobic001G276300--Sobic006G213700 Sobic003G380200 Sobic003G380200 Sobic001G276300--Sobic003G380200 Sobic006G226601 Sobic006G226601 Sobic001G276300--Sobic006G226601 Sobic010G231500 Sobic010G231500 Sobic001G276300--Sobic010G231500 Sobic007G169100 Sobic007G169100 Sobic001G276300--Sobic007G169100 Sobic002G225100 Sobic002G225100 Sobic001G276300--Sobic002G225100 Sobic001G333500--Sobic004G337400 Sobic002G193800 Sobic002G193800 Sobic001G333500--Sobic002G193800 Sobic003G219200 Sobic003G219200 Sobic001G333500--Sobic003G219200 Sobic004G069000 Sobic004G069000 Sobic001G333500--Sobic004G069000 Sobic005G199400 Sobic005G199400 Sobic001G333500--Sobic005G199400 Sobic001G194300 Sobic001G194300 Sobic001G333500--Sobic001G194300 Sobic006G102000 Sobic006G102000 Sobic001G333500--Sobic006G102000 SobicK031800 SobicK031800 Sobic001G333500--SobicK031800 Sobic001G333500--Sobic004G238200 Sobic003G220100 Sobic003G220100 Sobic005G106600--Sobic003G220100 Sobic001G333800 Sobic001G333800 Sobic005G106600--Sobic001G333800 Sobic009G038900 Sobic009G038900 Sobic005G106600--Sobic009G038900 Sobic001G133000 Sobic001G133000 Sobic005G106600--Sobic001G133000 Sobic004G312600 Sobic004G312600 Sobic005G106600--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic005G106600--Sobic007G058100 Sobic007G136200 Sobic007G136200 Sobic005G106600--Sobic007G136200 Sobic006G219600 Sobic006G219600 Sobic005G106600--Sobic006G219600 Sobic001G378100 Sobic001G378100 Sobic005G106600--Sobic001G378100
Octagon: transcription factors


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