Gene annotation
Transcriptome id Sobic.001G057700.1
Synonym AT-HSFA6B, Sb01g005250, HSFA6B
Functional annotation heat stress transcription factor, putative, expressed
UniProt C5WX78
Pfam PF03310 PF00447
Panther DB PTHR10015 PTHR10015:SF198
NCBI CDD KOG0627; Heat shock transcription factor
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0003677; DNA binding GO:0006355regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G22830 : heat shock transcription factor A6B
RAP-DB (Rice) LOC_Os03g58160.1 : heat stress transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a045167 , Zm00025a015267 , Zm00025a040051 , Zm00025a051078 , Zm00025a008557 , Zm00025a048930 , Zm00025a002613 , Zm00025a033648
Brachypodium KQK14978 , KQK14979 , PNT68735 , KQK18031 , KQK12714 , KQK18032 , KQJ99265 , PNT77358 , PNT72861 , PNT72862 , KQJ99684 , KQK21569 , KQK23525 , KQK09735 , KQK23526
Barley HORVU2Hr1G026020.1 , HORVU3Hr1G071550.3 , HORVU3Hr1G071550.2 , HORVU3Hr1G071550.1 , HORVU3Hr1G071550.5 , HORVU3Hr1G071550.4 , HORVU7Hr1G088920.2 , HORVU7Hr1G088920.3 , HORVU7Hr1G088920.1 , HORVU5Hr1G105770.4 , HORVU5Hr1G105770.1 , HORVU5Hr1G105770.3 , HORVU5Hr1G105770.2
Wheat TraesCS5B02G440700 , TraesCS2D02G211400 , TraesCS2D02G211400 , TraesCS5D02G445100 , TraesCS3A02G289200 , TraesCS2A02G146600 , TraesCS2A02G089300 , TraesCS7A02G355300 , TraesCS7D02G367700 , TraesCS2B02G171900 , TraesCS2B02G232000 , TraesCS2B02G232000 , TraesCS2A02G204500 , TraesCS2A02G204500 , TraesCS7B02G272500 , TraesCS2D02G087400 , TraesCS5B02G440700 , TraesCS5B02G440700 , TraesCS2D02G151200 , TraesCS5A02G437900
Populus -


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cDNA sequences
Sobic.001G057700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
2 Sobic.003G381700 DUF647 domain containing protein, putative, expressed -
3 Sobic.003G051000 expressed protein -
4 Sobic.003G264800 expressed protein -
5 Sobic.007G079400 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
6 Sobic.008G187100 early-responsive to dehydration protein-related, putative, expressed -
7 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
8 Sobic.004G355700 C2 domain containing protein, putative, expressed -
9 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
10 Sobic.007G164000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
11 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -
12 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
13 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
14 Sobic.002G341000 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
15 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -
16 Sobic.003G186900 - K12812: DDX39B, UAP56, ATP-dependent RNA helicase UAP56/SUB2
17 Sobic.006G167500 armadillo/beta-catenin-like repeat family protein, expressed -
18 Sobic.010G014100 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
19 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
20 Sobic.002G211800 AT-rich interaction region, putative, expressed -


Gene co-expression network
sample Sobic001G057700 Sobic001G057700 Sobic007G146400 Sobic007G146400 Sobic001G057700--Sobic007G146400 Sobic003G381700 Sobic003G381700 Sobic001G057700--Sobic003G381700 Sobic003G051000 Sobic003G051000 Sobic001G057700--Sobic003G051000 Sobic003G264800 Sobic003G264800 Sobic001G057700--Sobic003G264800 Sobic007G079400 Sobic007G079400 Sobic001G057700--Sobic007G079400 Sobic008G187100 Sobic008G187100 Sobic001G057700--Sobic008G187100 Sobic003G339700 Sobic003G339700 Sobic001G057700--Sobic003G339700 Sobic004G355700 Sobic004G355700 Sobic001G057700--Sobic004G355700 Sobic005G132000 Sobic005G132000 Sobic001G057700--Sobic005G132000 Sobic007G146400--Sobic001G057700 Sobic007G146400--Sobic005G132000 Sobic006G257800 Sobic006G257800 Sobic007G146400--Sobic006G257800 Sobic002G383600 Sobic002G383600 Sobic007G146400--Sobic002G383600 Sobic006G051800 Sobic006G051800 Sobic007G146400--Sobic006G051800 Sobic009G074400 Sobic009G074400 Sobic007G146400--Sobic009G074400 Sobic004G231900 Sobic004G231900 Sobic007G146400--Sobic004G231900 Sobic007G146400--Sobic003G339700 Sobic002G417300 Sobic002G417300 Sobic007G146400--Sobic002G417300 Sobic003G381700--Sobic008G187100 Sobic003G381700--Sobic001G057700 Sobic003G381700--Sobic003G339700 Sobic003G381700--Sobic003G264800 Sobic003G373600 Sobic003G373600 Sobic003G381700--Sobic003G373600 Sobic003G381700--Sobic007G146400 Sobic001G276300 Sobic001G276300 Sobic003G381700--Sobic001G276300 Sobic001G333500 Sobic001G333500 Sobic003G381700--Sobic001G333500 Sobic005G106600 Sobic005G106600 Sobic003G381700--Sobic005G106600 Sobic007G164000 Sobic007G164000 Sobic003G051000--Sobic007G164000 Sobic003G051000--Sobic001G057700 Sobic004G169000 Sobic004G169000 Sobic003G051000--Sobic004G169000 Sobic005G084800 Sobic005G084800 Sobic003G051000--Sobic005G084800 Sobic010G236300 Sobic010G236300 Sobic003G051000--Sobic010G236300 Sobic001G498000 Sobic001G498000 Sobic003G051000--Sobic001G498000 Sobic003G043300 Sobic003G043300 Sobic003G051000--Sobic003G043300 Sobic002G187700 Sobic002G187700 Sobic003G051000--Sobic002G187700 Sobic003G355900 Sobic003G355900 Sobic003G051000--Sobic003G355900 Sobic003G186900 Sobic003G186900 Sobic003G264800--Sobic003G186900 Sobic003G003450 Sobic003G003450 Sobic003G264800--Sobic003G003450 Sobic006G232600 Sobic006G232600 Sobic003G264800--Sobic006G232600 Sobic003G264800--Sobic005G106600 Sobic002G072400 Sobic002G072400 Sobic003G264800--Sobic002G072400 Sobic009G103000 Sobic009G103000 Sobic003G264800--Sobic009G103000 Sobic004G238200 Sobic004G238200 Sobic003G264800--Sobic004G238200 Sobic004G207400 Sobic004G207400 Sobic003G264800--Sobic004G207400 Sobic004G337400 Sobic004G337400 Sobic003G264800--Sobic004G337400 Sobic007G108400 Sobic007G108400 Sobic007G079400--Sobic007G108400 Sobic003G105900 Sobic003G105900 Sobic007G079400--Sobic003G105900 Sobic007G079400--Sobic001G057700 Sobic007G079400--Sobic003G264800 Sobic002G401000 Sobic002G401000 Sobic007G079400--Sobic002G401000 Sobic007G079400--Sobic003G373600 Sobic002G393700 Sobic002G393700 Sobic007G079400--Sobic002G393700 Sobic005G062700 Sobic005G062700 Sobic007G079400--Sobic005G062700 Sobic004G344000 Sobic004G344000 Sobic007G079400--Sobic004G344000 Sobic008G187100--Sobic003G381700 Sobic008G187100--Sobic003G186900 Sobic008G187100--Sobic003G339700 Sobic008G187100--Sobic005G106600 Sobic008G187100--Sobic001G057700 Sobic001G352400 Sobic001G352400 Sobic008G187100--Sobic001G352400 Sobic003G166200 Sobic003G166200 Sobic008G187100--Sobic003G166200 Sobic004G322700 Sobic004G322700 Sobic008G187100--Sobic004G322700 Sobic008G187100--Sobic007G146400 Sobic003G339700--Sobic002G417300 Sobic003G339700--Sobic003G381700 Sobic003G339700--Sobic008G187100 Sobic003G339700--Sobic007G146400 Sobic001G160800 Sobic001G160800 Sobic003G339700--Sobic001G160800 Sobic003G334000 Sobic003G334000 Sobic003G339700--Sobic003G334000 Sobic003G339700--Sobic001G057700 Sobic009G069300 Sobic009G069300 Sobic003G339700--Sobic009G069300 Sobic006G066800 Sobic006G066800 Sobic003G339700--Sobic006G066800 Sobic003G271400 Sobic003G271400 Sobic004G355700--Sobic003G271400 Sobic001G212300 Sobic001G212300 Sobic004G355700--Sobic001G212300 Sobic004G355700--Sobic004G337400 Sobic004G042200 Sobic004G042200 Sobic004G355700--Sobic004G042200 Sobic005G198000 Sobic005G198000 Sobic004G355700--Sobic005G198000 Sobic008G168300 Sobic008G168300 Sobic004G355700--Sobic008G168300 Sobic003G276300 Sobic003G276300 Sobic004G355700--Sobic003G276300 Sobic004G355700--Sobic005G106600 Sobic003G191700 Sobic003G191700 Sobic004G355700--Sobic003G191700 Sobic003G029500 Sobic003G029500 Sobic005G132000--Sobic003G029500 Sobic005G201000 Sobic005G201000 Sobic005G132000--Sobic005G201000 Sobic009G259100 Sobic009G259100 Sobic005G132000--Sobic009G259100 Sobic009G040400 Sobic009G040400 Sobic005G132000--Sobic009G040400 Sobic007G010800 Sobic007G010800 Sobic005G132000--Sobic007G010800 Sobic005G132000--Sobic007G146400 Sobic010G132600 Sobic010G132600 Sobic005G132000--Sobic010G132600 Sobic002G295100 Sobic002G295100 Sobic005G132000--Sobic002G295100 Sobic005G132000--Sobic003G003450
Octagon: transcription factors


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