Gene annotation
Transcriptome id Sobic.006G167500.7
Synonym
Functional annotation armadillo/beta-catenin-like repeat family protein, expressed
UniProt A0A1Z5RF52
Pfam -
Panther DB PTHR23315 PTHR23315:SF90
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G23180 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os01g34080.1 : armadillo/beta-catenin-like repeat family protein, expressed
MaizeGDB (Corn) Zm00025a010351
Brachypodium KQK04519 , KQK04518 , KQK04517 , PNT70593 , PNT70592 , PNT70597 , PNT70595 , PNT70594 , PNT70596 , KQK04522 , KQK04523 , KQK04520 , KQK04521
Barley -
Wheat TraesCS3A02G202100 , TraesCS3A02G202100 , TraesCS3A02G202100 , TraesCS3B02G230500 , TraesCS3D02G201100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
2 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
3 Sobic.001G057700 heat stress transcription factor, putative, expressed K09419: heat shock transcription factor, other eukaryote
4 Sobic.004G011300 S1 RNA binding domain containing protein, expressed -
5 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
6 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
7 Sobic.003G264800 expressed protein -
8 Sobic.003G083400 cytoskeletal protein, putative, expressed -
9 Sobic.001G333500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
10 Sobic.005G084800 expressed protein -
11 Sobic.001G495200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
12 Sobic.005G199400 glutathione synthetase, chloroplast precursor, putative, expressed K01920: glutathione synthase
13 Sobic.003G077700 DUF647 domain containing protein, putative, expressed -
14 Sobic.003G381700 DUF647 domain containing protein, putative, expressed -
15 Sobic.004G269800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
16 Sobic.003G294300 S4 domain containing protein, putative, expressed -
17 Sobic.001G160800 integral membrane protein DUF6 containing protein, expressed -
18 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
19 Sobic.007G166200 PPDK(PubMedID : 19549309)@NADP-malete dehydrogenase(PubMedID : 26904072)@NADP-malate dehydrogenase (NADP-MDH)(PubMedID : 16243851)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)
20 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase


Gene co-expression network
sample Sobic006G167500 Sobic006G167500 Sobic007G146400 Sobic007G146400 Sobic006G167500--Sobic007G146400 Sobic004G238200 Sobic004G238200 Sobic006G167500--Sobic004G238200 Sobic001G057700 Sobic001G057700 Sobic006G167500--Sobic001G057700 Sobic004G011300 Sobic004G011300 Sobic006G167500--Sobic004G011300 Sobic004G207400 Sobic004G207400 Sobic006G167500--Sobic004G207400 Sobic002G072400 Sobic002G072400 Sobic006G167500--Sobic002G072400 Sobic003G264800 Sobic003G264800 Sobic006G167500--Sobic003G264800 Sobic003G083400 Sobic003G083400 Sobic006G167500--Sobic003G083400 Sobic001G333500 Sobic001G333500 Sobic006G167500--Sobic001G333500 Sobic007G146400--Sobic001G057700 Sobic005G132000 Sobic005G132000 Sobic007G146400--Sobic005G132000 Sobic006G257800 Sobic006G257800 Sobic007G146400--Sobic006G257800 Sobic002G383600 Sobic002G383600 Sobic007G146400--Sobic002G383600 Sobic006G051800 Sobic006G051800 Sobic007G146400--Sobic006G051800 Sobic009G074400 Sobic009G074400 Sobic007G146400--Sobic009G074400 Sobic004G231900 Sobic004G231900 Sobic007G146400--Sobic004G231900 Sobic003G339700 Sobic003G339700 Sobic007G146400--Sobic003G339700 Sobic002G417300 Sobic002G417300 Sobic007G146400--Sobic002G417300 Sobic003G232700 Sobic003G232700 Sobic004G238200--Sobic003G232700 Sobic004G238200--Sobic004G207400 Sobic001G500600 Sobic001G500600 Sobic004G238200--Sobic001G500600 Sobic005G084500 Sobic005G084500 Sobic004G238200--Sobic005G084500 Sobic001G516901 Sobic001G516901 Sobic004G238200--Sobic001G516901 Sobic004G238200--Sobic002G072400 Sobic007G005400 Sobic007G005400 Sobic004G238200--Sobic007G005400 Sobic006G197300 Sobic006G197300 Sobic004G238200--Sobic006G197300 Sobic006G232600 Sobic006G232600 Sobic004G238200--Sobic006G232600 Sobic001G057700--Sobic007G146400 Sobic003G381700 Sobic003G381700 Sobic001G057700--Sobic003G381700 Sobic003G051000 Sobic003G051000 Sobic001G057700--Sobic003G051000 Sobic001G057700--Sobic003G264800 Sobic007G079400 Sobic007G079400 Sobic001G057700--Sobic007G079400 Sobic008G187100 Sobic008G187100 Sobic001G057700--Sobic008G187100 Sobic001G057700--Sobic003G339700 Sobic004G355700 Sobic004G355700 Sobic001G057700--Sobic004G355700 Sobic001G057700--Sobic005G132000 Sobic006G106400 Sobic006G106400 Sobic004G011300--Sobic006G106400 Sobic009G148500 Sobic009G148500 Sobic004G011300--Sobic009G148500 Sobic001G495200 Sobic001G495200 Sobic004G011300--Sobic001G495200 Sobic004G336000 Sobic004G336000 Sobic004G011300--Sobic004G336000 Sobic002G181000 Sobic002G181000 Sobic004G011300--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic004G011300--Sobic002G043600 Sobic008G039600 Sobic008G039600 Sobic004G011300--Sobic008G039600 Sobic008G073100 Sobic008G073100 Sobic004G011300--Sobic008G073100 Sobic003G301300 Sobic003G301300 Sobic004G011300--Sobic003G301300 Sobic004G207400--Sobic002G072400 Sobic004G207400--Sobic006G232600 Sobic004G207400--Sobic004G238200 Sobic009G170200 Sobic009G170200 Sobic004G207400--Sobic009G170200 Sobic003G203300 Sobic003G203300 Sobic004G207400--Sobic003G203300 Sobic002G225100 Sobic002G225100 Sobic004G207400--Sobic002G225100 Sobic004G300100 Sobic004G300100 Sobic004G207400--Sobic004G300100 Sobic004G281900 Sobic004G281900 Sobic004G207400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic004G207400--Sobic007G166200 Sobic002G072400--Sobic004G207400 Sobic002G349100 Sobic002G349100 Sobic002G072400--Sobic002G349100 Sobic004G317700 Sobic004G317700 Sobic002G072400--Sobic004G317700 Sobic002G072400--Sobic004G238200 Sobic002G129400 Sobic002G129400 Sobic002G072400--Sobic002G129400 Sobic004G307100 Sobic004G307100 Sobic002G072400--Sobic004G307100 Sobic002G072400--Sobic004G281900 Sobic002G072400--Sobic007G166200 Sobic002G081400 Sobic002G081400 Sobic002G072400--Sobic002G081400 Sobic003G186900 Sobic003G186900 Sobic003G264800--Sobic003G186900 Sobic003G003450 Sobic003G003450 Sobic003G264800--Sobic003G003450 Sobic003G264800--Sobic006G232600 Sobic005G106600 Sobic005G106600 Sobic003G264800--Sobic005G106600 Sobic003G264800--Sobic002G072400 Sobic009G103000 Sobic009G103000 Sobic003G264800--Sobic009G103000 Sobic003G264800--Sobic004G238200 Sobic003G264800--Sobic004G207400 Sobic004G337400 Sobic004G337400 Sobic003G264800--Sobic004G337400 Sobic004G359100 Sobic004G359100 Sobic003G083400--Sobic004G359100 Sobic002G411400 Sobic002G411400 Sobic003G083400--Sobic002G411400 Sobic003G128400 Sobic003G128400 Sobic003G083400--Sobic003G128400 Sobic001G375000 Sobic001G375000 Sobic003G083400--Sobic001G375000 Sobic004G238900 Sobic004G238900 Sobic003G083400--Sobic004G238900 Sobic006G088000 Sobic006G088000 Sobic003G083400--Sobic006G088000 Sobic003G083400--Sobic004G011300 Sobic003G083400--Sobic004G336000 Sobic008G130900 Sobic008G130900 Sobic003G083400--Sobic008G130900 Sobic001G333500--Sobic004G337400 Sobic002G193800 Sobic002G193800 Sobic001G333500--Sobic002G193800 Sobic003G219200 Sobic003G219200 Sobic001G333500--Sobic003G219200 Sobic004G069000 Sobic004G069000 Sobic001G333500--Sobic004G069000 Sobic005G199400 Sobic005G199400 Sobic001G333500--Sobic005G199400 Sobic001G194300 Sobic001G194300 Sobic001G333500--Sobic001G194300 Sobic006G102000 Sobic006G102000 Sobic001G333500--Sobic006G102000 SobicK031800 SobicK031800 Sobic001G333500--SobicK031800 Sobic001G333500--Sobic004G238200
Octagon: transcription factors


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