Gene annotation
Transcriptome id Sobic.008G187100.1
Synonym RXW8, Sb08g022840
Functional annotation early-responsive to dehydration protein-related, putative, expressed
UniProt A0A1Z5R7F6
Pfam PF13967 PF02714
Panther DB PTHR13018 PTHR13018:SF31
NCBI CDD KOG1134; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G58520 : lipases;hydrolases, acting on ester bonds
RAP-DB (Rice) LOC_Os12g43720.1 : early-responsive to dehydration protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a007490 , Zm00025a025088
Brachypodium PNT74328 , PNT74329 , PNT74327 , KQJ85654 , KQK13814 , KQK13815 , KQK13812 , KQK13813 , KQK13811
Barley HORVU4Hr1G003420.5 , HORVU4Hr1G003420.4 , HORVU4Hr1G003420.6 , HORVU4Hr1G003420.1 , HORVU4Hr1G003420.3 , HORVU4Hr1G003420.2 , HORVU4Hr1G003420.9 , HORVU4Hr1G003420.8 , HORVU4Hr1G003420.7 , HORVU5Hr1G001660.1 , HORVU5Hr1G001660.2 , HORVU5Hr1G001660.3 , HORVU5Hr1G001660.4 , HORVU5Hr1G001660.5 , HORVU4Hr1G003420.33 , HORVU4Hr1G003420.32 , HORVU4Hr1G003420.31 , HORVU4Hr1G003420.30 , HORVU4Hr1G003420.28 , HORVU4Hr1G003420.29 , HORVU4Hr1G003420.24 , HORVU4Hr1G003420.25 , HORVU4Hr1G003420.26 , HORVU4Hr1G003420.27 , HORVU4Hr1G003420.20 , HORVU4Hr1G003420.21 , HORVU4Hr1G003420.22 , HORVU4Hr1G003420.23 , HORVU5Hr1G001670.2 , HORVU5Hr1G001670.1 , HORVU4Hr1G003420.11 , HORVU4Hr1G003420.10 , HORVU4Hr1G003420.13 , HORVU4Hr1G003420.12 , HORVU4Hr1G003420.15 , HORVU4Hr1G003420.14 , HORVU4Hr1G003420.17 , HORVU4Hr1G003420.16 , HORVU4Hr1G003420.19 , HORVU4Hr1G003420.18
Wheat TraesCS4B02G023400 , TraesCS5B02G010700 , TraesCS5B02G010700 , TraesCS5B02G010800 , TraesCS5B02G010800 , TraesCS4D02G020100 , TraesCS4D02G020100 , TraesCS4D02G020100 , TraesCS4D02G020100 , TraesCS4D02G020100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018000 , TraesCS5D02G018000 , TraesCS4A02G291700 , TraesCS4A02G291700 , TraesCS4A02G291700 , TraesCS4A02G291700 , TraesCS5A02G012600 , TraesCS5A02G012600 , TraesCS4B02G022300 , TraesCS4B02G022300 , TraesCS5A02G012500
Populus -


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cDNA sequences
Sobic.008G187100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G381700 DUF647 domain containing protein, putative, expressed -
2 Sobic.003G186900 - K12812: DDX39B, UAP56, ATP-dependent RNA helicase UAP56/SUB2
3 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
5 Sobic.001G057700 heat stress transcription factor, putative, expressed K09419: heat shock transcription factor, other eukaryote
6 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.003G166200 expressed protein -
8 Sobic.004G322700 - -
9 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
10 Sobic.004G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
11 Sobic.004G231900 ribonuclease protein, putative, expressed K18758: DIS3-like exonuclease 2
12 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
13 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
14 Sobic.003G264800 expressed protein -
15 Sobic.002G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
16 Sobic.005G062700 nifU, putative, expressed -
17 Sobic.010G183300 - -
18 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
19 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
20 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -


Gene co-expression network
sample Sobic008G187100 Sobic008G187100 Sobic003G381700 Sobic003G381700 Sobic008G187100--Sobic003G381700 Sobic003G186900 Sobic003G186900 Sobic008G187100--Sobic003G186900 Sobic003G339700 Sobic003G339700 Sobic008G187100--Sobic003G339700 Sobic005G106600 Sobic005G106600 Sobic008G187100--Sobic005G106600 Sobic001G057700 Sobic001G057700 Sobic008G187100--Sobic001G057700 Sobic001G352400 Sobic001G352400 Sobic008G187100--Sobic001G352400 Sobic003G166200 Sobic003G166200 Sobic008G187100--Sobic003G166200 Sobic004G322700 Sobic004G322700 Sobic008G187100--Sobic004G322700 Sobic007G146400 Sobic007G146400 Sobic008G187100--Sobic007G146400 Sobic003G381700--Sobic008G187100 Sobic003G381700--Sobic001G057700 Sobic003G381700--Sobic003G339700 Sobic003G264800 Sobic003G264800 Sobic003G381700--Sobic003G264800 Sobic003G373600 Sobic003G373600 Sobic003G381700--Sobic003G373600 Sobic003G381700--Sobic007G146400 Sobic001G276300 Sobic001G276300 Sobic003G381700--Sobic001G276300 Sobic001G333500 Sobic001G333500 Sobic003G381700--Sobic001G333500 Sobic003G381700--Sobic005G106600 Sobic003G186900--Sobic003G166200 Sobic003G186900--Sobic003G264800 Sobic003G186900--Sobic005G106600 Sobic006G219600 Sobic006G219600 Sobic003G186900--Sobic006G219600 Sobic002G072400 Sobic002G072400 Sobic003G186900--Sobic002G072400 Sobic004G337400 Sobic004G337400 Sobic003G186900--Sobic004G337400 Sobic010G171600 Sobic010G171600 Sobic003G186900--Sobic010G171600 Sobic001G333800 Sobic001G333800 Sobic003G186900--Sobic001G333800 Sobic001G207800 Sobic001G207800 Sobic003G186900--Sobic001G207800 Sobic002G417300 Sobic002G417300 Sobic003G339700--Sobic002G417300 Sobic003G339700--Sobic003G381700 Sobic003G339700--Sobic008G187100 Sobic003G339700--Sobic007G146400 Sobic001G160800 Sobic001G160800 Sobic003G339700--Sobic001G160800 Sobic003G334000 Sobic003G334000 Sobic003G339700--Sobic003G334000 Sobic003G339700--Sobic001G057700 Sobic009G069300 Sobic009G069300 Sobic003G339700--Sobic009G069300 Sobic006G066800 Sobic006G066800 Sobic003G339700--Sobic006G066800 Sobic003G220100 Sobic003G220100 Sobic005G106600--Sobic003G220100 Sobic005G106600--Sobic001G333800 Sobic009G038900 Sobic009G038900 Sobic005G106600--Sobic009G038900 Sobic001G133000 Sobic001G133000 Sobic005G106600--Sobic001G133000 Sobic004G312600 Sobic004G312600 Sobic005G106600--Sobic004G312600 Sobic007G058100 Sobic007G058100 Sobic005G106600--Sobic007G058100 Sobic007G136200 Sobic007G136200 Sobic005G106600--Sobic007G136200 Sobic005G106600--Sobic006G219600 Sobic001G378100 Sobic001G378100 Sobic005G106600--Sobic001G378100 Sobic001G057700--Sobic007G146400 Sobic001G057700--Sobic003G381700 Sobic003G051000 Sobic003G051000 Sobic001G057700--Sobic003G051000 Sobic001G057700--Sobic003G264800 Sobic007G079400 Sobic007G079400 Sobic001G057700--Sobic007G079400 Sobic001G057700--Sobic008G187100 Sobic001G057700--Sobic003G339700 Sobic004G355700 Sobic004G355700 Sobic001G057700--Sobic004G355700 Sobic005G132000 Sobic005G132000 Sobic001G057700--Sobic005G132000 Sobic004G281800 Sobic004G281800 Sobic001G352400--Sobic004G281800 Sobic010G275700 Sobic010G275700 Sobic001G352400--Sobic010G275700 Sobic002G382700 Sobic002G382700 Sobic001G352400--Sobic002G382700 Sobic001G352400--Sobic004G322700 Sobic002G119100 Sobic002G119100 Sobic001G352400--Sobic002G119100 Sobic008G038500 Sobic008G038500 Sobic001G352400--Sobic008G038500 Sobic005G101200 Sobic005G101200 Sobic001G352400--Sobic005G101200 Sobic004G169000 Sobic004G169000 Sobic001G352400--Sobic004G169000 Sobic001G352400--Sobic009G038900 Sobic006G259600 Sobic006G259600 Sobic003G166200--Sobic006G259600 Sobic003G166200--Sobic001G333800 Sobic003G166200--Sobic001G207800 Sobic006G090100 Sobic006G090100 Sobic003G166200--Sobic006G090100 Sobic001G258200 Sobic001G258200 Sobic003G166200--Sobic001G258200 Sobic009G093100 Sobic009G093100 Sobic003G166200--Sobic009G093100 Sobic003G166200--Sobic003G186900 Sobic006G221000 Sobic006G221000 Sobic003G166200--Sobic006G221000 Sobic001G303200 Sobic001G303200 Sobic003G166200--Sobic001G303200 Sobic004G322600 Sobic004G322600 Sobic004G322700--Sobic004G322600 Sobic004G322700--Sobic002G382700 Sobic004G322700--Sobic008G038500 Sobic004G322700--Sobic002G119100 Sobic001G244600 Sobic001G244600 Sobic004G322700--Sobic001G244600 Sobic001G331600 Sobic001G331600 Sobic004G322700--Sobic001G331600 Sobic004G322700--Sobic004G312600 Sobic004G322700--Sobic007G058100 Sobic007G227100 Sobic007G227100 Sobic004G322700--Sobic007G227100 Sobic007G146400--Sobic001G057700 Sobic007G146400--Sobic005G132000 Sobic006G257800 Sobic006G257800 Sobic007G146400--Sobic006G257800 Sobic002G383600 Sobic002G383600 Sobic007G146400--Sobic002G383600 Sobic006G051800 Sobic006G051800 Sobic007G146400--Sobic006G051800 Sobic009G074400 Sobic009G074400 Sobic007G146400--Sobic009G074400 Sobic004G231900 Sobic004G231900 Sobic007G146400--Sobic004G231900 Sobic007G146400--Sobic003G339700 Sobic007G146400--Sobic002G417300
Octagon: transcription factors


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