Gene annotation
Transcriptome id Sobic.003G051000.1
Synonym Sb03g004445
Functional annotation expressed protein
UniProt C5XNF3
Pfam -
Panther DB PTHR12242 PTHR12242:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G62960 : -
RAP-DB (Rice) LOC_Os01g07700.1 : expressed protein
MaizeGDB (Corn) Zm00025a023254 , Zm00025a002308
Brachypodium KQK02919 , KQK02917 , KQK02920 , KQK02918
Barley HORVU6Hr1G058170.1 , HORVU4Hr1G045580.1 , HORVU4Hr1G045580.2 , HORVU3Hr1G022890.1 , HORVU7Hr1G087360.1 , HORVU5Hr1G083280.1
Wheat TraesCS3D02G090200 , TraesCS3A02G090100 , TraesCS3B02G105600
Populus -


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cDNA sequences
Sobic.003G051000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G164000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
2 Sobic.001G057700 heat stress transcription factor, putative, expressed K09419: heat shock transcription factor, other eukaryote
3 Sobic.004G169000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
4 Sobic.005G084800 expressed protein -
5 Sobic.010G236300 "domain confirmed by Pfam database, expressed in root, expression induced BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
6 Sobic.001G498000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
7 Sobic.003G043300 early fruit mRNA, putative, expressed -
8 Sobic.002G187700 expressed protein -
9 Sobic.003G355900 prenylated rab acceptor, putative, expressed -
10 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
11 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4
12 Sobic.003G302800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
13 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
15 Sobic.004G238200 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
16 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
17 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
18 Sobic.005G199400 glutathione synthetase, chloroplast precursor, putative, expressed K01920: glutathione synthase
19 Sobic.008G140100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
20 Sobic.001G303100 expressed protein -


Gene co-expression network
sample Sobic003G051000 Sobic003G051000 Sobic007G164000 Sobic007G164000 Sobic003G051000--Sobic007G164000 Sobic001G057700 Sobic001G057700 Sobic003G051000--Sobic001G057700 Sobic004G169000 Sobic004G169000 Sobic003G051000--Sobic004G169000 Sobic005G084800 Sobic005G084800 Sobic003G051000--Sobic005G084800 Sobic010G236300 Sobic010G236300 Sobic003G051000--Sobic010G236300 Sobic001G498000 Sobic001G498000 Sobic003G051000--Sobic001G498000 Sobic003G043300 Sobic003G043300 Sobic003G051000--Sobic003G043300 Sobic002G187700 Sobic002G187700 Sobic003G051000--Sobic002G187700 Sobic003G355900 Sobic003G355900 Sobic003G051000--Sobic003G355900 Sobic007G164000--Sobic003G051000 Sobic007G164000--Sobic002G187700 Sobic001G481900 Sobic001G481900 Sobic007G164000--Sobic001G481900 Sobic003G190400 Sobic003G190400 Sobic007G164000--Sobic003G190400 Sobic001G128300 Sobic001G128300 Sobic007G164000--Sobic001G128300 Sobic008G059100 Sobic008G059100 Sobic007G164000--Sobic008G059100 Sobic003G198800 Sobic003G198800 Sobic007G164000--Sobic003G198800 Sobic001G390200 Sobic001G390200 Sobic007G164000--Sobic001G390200 Sobic007G164000--Sobic001G057700 Sobic007G146400 Sobic007G146400 Sobic001G057700--Sobic007G146400 Sobic003G381700 Sobic003G381700 Sobic001G057700--Sobic003G381700 Sobic001G057700--Sobic003G051000 Sobic003G264800 Sobic003G264800 Sobic001G057700--Sobic003G264800 Sobic007G079400 Sobic007G079400 Sobic001G057700--Sobic007G079400 Sobic008G187100 Sobic008G187100 Sobic001G057700--Sobic008G187100 Sobic003G339700 Sobic003G339700 Sobic001G057700--Sobic003G339700 Sobic004G355700 Sobic004G355700 Sobic001G057700--Sobic004G355700 Sobic005G132000 Sobic005G132000 Sobic001G057700--Sobic005G132000 Sobic001G352400 Sobic001G352400 Sobic004G169000--Sobic001G352400 Sobic002G341000 Sobic002G341000 Sobic004G169000--Sobic002G341000 Sobic001G333800 Sobic001G333800 Sobic004G169000--Sobic001G333800 Sobic004G281800 Sobic004G281800 Sobic004G169000--Sobic004G281800 Sobic006G050700 Sobic006G050700 Sobic004G169000--Sobic006G050700 Sobic006G175800 Sobic006G175800 Sobic004G169000--Sobic006G175800 Sobic003G229300 Sobic003G229300 Sobic004G169000--Sobic003G229300 Sobic004G042200 Sobic004G042200 Sobic004G169000--Sobic004G042200 Sobic005G106600 Sobic005G106600 Sobic004G169000--Sobic005G106600 Sobic004G238200 Sobic004G238200 Sobic005G084800--Sobic004G238200 Sobic004G163800 Sobic004G163800 Sobic005G084800--Sobic004G163800 Sobic005G199400 Sobic005G199400 Sobic005G084800--Sobic005G199400 Sobic005G084800--Sobic003G355900 Sobic003G369400 Sobic003G369400 Sobic005G084800--Sobic003G369400 Sobic005G084500 Sobic005G084500 Sobic005G084800--Sobic005G084500 Sobic003G176000 Sobic003G176000 Sobic005G084800--Sobic003G176000 Sobic002G218500 Sobic002G218500 Sobic005G084800--Sobic002G218500 Sobic005G084800--Sobic010G236300 Sobic010G236300--Sobic005G084800 Sobic010G236300--Sobic003G051000 Sobic001G381600 Sobic001G381600 Sobic010G236300--Sobic001G381600 Sobic009G201300 Sobic009G201300 Sobic010G236300--Sobic009G201300 Sobic002G211800 Sobic002G211800 Sobic010G236300--Sobic002G211800 Sobic010G236300--Sobic007G164000 Sobic010G236300--Sobic003G355900 Sobic002G305000 Sobic002G305000 Sobic010G236300--Sobic002G305000 Sobic003G418100 Sobic003G418100 Sobic010G236300--Sobic003G418100 Sobic004G219400 Sobic004G219400 Sobic001G498000--Sobic004G219400 Sobic006G130300 Sobic006G130300 Sobic001G498000--Sobic006G130300 Sobic003G391200 Sobic003G391200 Sobic001G498000--Sobic003G391200 Sobic008G115900 Sobic008G115900 Sobic001G498000--Sobic008G115900 Sobic002G382700 Sobic002G382700 Sobic001G498000--Sobic002G382700 Sobic001G017300 Sobic001G017300 Sobic001G498000--Sobic001G017300 Sobic006G158100 Sobic006G158100 Sobic001G498000--Sobic006G158100 Sobic006G221000 Sobic006G221000 Sobic001G498000--Sobic006G221000 Sobic004G082300 Sobic004G082300 Sobic001G498000--Sobic004G082300 Sobic003G220800 Sobic003G220800 Sobic003G043300--Sobic003G220800 Sobic010G074300 Sobic010G074300 Sobic003G043300--Sobic010G074300 Sobic003G043300--Sobic006G175800 Sobic010G251300 Sobic010G251300 Sobic003G043300--Sobic010G251300 Sobic001G136800 Sobic001G136800 Sobic003G043300--Sobic001G136800 Sobic001G257700 Sobic001G257700 Sobic003G043300--Sobic001G257700 Sobic008G077500 Sobic008G077500 Sobic003G043300--Sobic008G077500 Sobic004G040900 Sobic004G040900 Sobic003G043300--Sobic004G040900 Sobic003G043300--Sobic003G051000 Sobic002G187700--Sobic001G481900 Sobic004G306500 Sobic004G306500 Sobic002G187700--Sobic004G306500 Sobic002G187700--Sobic008G059100 Sobic002G187700--Sobic003G198800 Sobic001G488700 Sobic001G488700 Sobic002G187700--Sobic001G488700 Sobic003G115900 Sobic003G115900 Sobic002G187700--Sobic003G115900 Sobic006G002300 Sobic006G002300 Sobic002G187700--Sobic006G002300 Sobic002G187700--Sobic003G190400 Sobic002G187700--Sobic004G169000 Sobic002G294800 Sobic002G294800 Sobic003G355900--Sobic002G294800 Sobic002G359400 Sobic002G359400 Sobic003G355900--Sobic002G359400 Sobic003G355900--Sobic001G128300 Sobic001G451400 Sobic001G451400 Sobic003G355900--Sobic001G451400 Sobic001G389100 Sobic001G389100 Sobic003G355900--Sobic001G389100 Sobic009G068500 Sobic009G068500 Sobic003G355900--Sobic009G068500 Sobic003G355900--Sobic003G369400 Sobic003G355900--Sobic005G084800 Sobic009G132700 Sobic009G132700 Sobic003G355900--Sobic009G132700
Octagon: transcription factors


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