Gene annotation
Transcriptome id Sobic.006G064200.1
Synonym Sb06g015160
Functional annotation expressed protein
UniProt C5YFG1
Pfam -
Panther DB PTHR33132 PTHR33132:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56500 : serine-rich protein-related
RAP-DB (Rice) LOC_Os02g32469.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT60990 , PNT60991
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G064200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G130000 STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed K13436: pto-interacting protein 1
2 Sobic.002G200700 expressed protein -
3 Sobic.004G151500 AP2 domain containing protein, expressed -
4 Sobic.003G224100 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
5 Sobic.006G011300 membrane related protein CP5, putative, expressed -
6 Sobic.002G201900 transporter family protein, putative, expressed -
7 Sobic.003G334000 expressed protein -
8 Sobic.005G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
9 Sobic.004G154400 drought-induced protein 1, putative, expressed -
10 Sobic.003G371250 - -
11 Sobic.001G339500 expressed protein -
12 Sobic.003G372400 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
13 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
14 Sobic.002G136100 genetic modifier, putative, expressed -
15 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
16 Sobic.006G215600 SHR5-receptor-like kinase, putative, expressed -
17 Sobic.004G006400 cytochrome P450, putative, expressed -
18 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
19 Sobic.004G298900 OR, putative, expressed -
20 Sobic.003G037300 Twin LOV 1, putative, expressed -


Gene co-expression network
sample Sobic006G064200 Sobic006G064200 Sobic006G130000 Sobic006G130000 Sobic006G064200--Sobic006G130000 Sobic002G200700 Sobic002G200700 Sobic006G064200--Sobic002G200700 Sobic004G151500 Sobic004G151500 Sobic006G064200--Sobic004G151500 Sobic003G224100 Sobic003G224100 Sobic006G064200--Sobic003G224100 Sobic006G011300 Sobic006G011300 Sobic006G064200--Sobic006G011300 Sobic002G201900 Sobic002G201900 Sobic006G064200--Sobic002G201900 Sobic003G334000 Sobic003G334000 Sobic006G064200--Sobic003G334000 Sobic005G089600 Sobic005G089600 Sobic006G064200--Sobic005G089600 Sobic004G154400 Sobic004G154400 Sobic006G064200--Sobic004G154400 Sobic006G130000--Sobic006G064200 Sobic006G055000 Sobic006G055000 Sobic006G130000--Sobic006G055000 Sobic008G033200 Sobic008G033200 Sobic006G130000--Sobic008G033200 Sobic006G130000--Sobic002G201900 Sobic006G130000--Sobic002G200700 Sobic006G130000--Sobic005G089600 Sobic007G141700 Sobic007G141700 Sobic006G130000--Sobic007G141700 Sobic002G232200 Sobic002G232200 Sobic006G130000--Sobic002G232200 Sobic006G130000--Sobic003G224100 Sobic002G200700--Sobic003G224100 Sobic002G001000 Sobic002G001000 Sobic002G200700--Sobic002G001000 Sobic002G200700--Sobic002G201900 Sobic003G007700 Sobic003G007700 Sobic002G200700--Sobic003G007700 Sobic002G200700--Sobic006G064200 Sobic010G269400 Sobic010G269400 Sobic002G200700--Sobic010G269400 Sobic002G136100 Sobic002G136100 Sobic002G200700--Sobic002G136100 Sobic002G200700--Sobic006G130000 Sobic006G258700 Sobic006G258700 Sobic002G200700--Sobic006G258700 Sobic004G298900 Sobic004G298900 Sobic004G151500--Sobic004G298900 Sobic004G268300 Sobic004G268300 Sobic004G151500--Sobic004G268300 Sobic003G014300 Sobic003G014300 Sobic004G151500--Sobic003G014300 Sobic003G037300 Sobic003G037300 Sobic004G151500--Sobic003G037300 Sobic008G052900 Sobic008G052900 Sobic004G151500--Sobic008G052900 Sobic009G062400 Sobic009G062400 Sobic004G151500--Sobic009G062400 Sobic004G151500--Sobic006G258700 Sobic006G260800 Sobic006G260800 Sobic004G151500--Sobic006G260800 Sobic001G183000 Sobic001G183000 Sobic004G151500--Sobic001G183000 Sobic003G224100--Sobic002G200700 Sobic003G224100--Sobic006G011300 Sobic003G224100--Sobic002G001000 Sobic001G339500 Sobic001G339500 Sobic003G224100--Sobic001G339500 Sobic006G175800 Sobic006G175800 Sobic003G224100--Sobic006G175800 Sobic003G224100--Sobic006G064200 Sobic008G077500 Sobic008G077500 Sobic003G224100--Sobic008G077500 Sobic001G413000 Sobic001G413000 Sobic003G224100--Sobic001G413000 Sobic003G224100--Sobic006G258700 Sobic006G011300--Sobic003G224100 Sobic001G251800 Sobic001G251800 Sobic006G011300--Sobic001G251800 Sobic006G011300--Sobic001G339500 Sobic003G043300 Sobic003G043300 Sobic006G011300--Sobic003G043300 Sobic006G011300--Sobic006G175800 Sobic006G011300--Sobic002G200700 Sobic006G011300--Sobic006G064200 Sobic004G169000 Sobic004G169000 Sobic006G011300--Sobic004G169000 Sobic003G349200 Sobic003G349200 Sobic006G011300--Sobic003G349200 Sobic002G201900--Sobic002G200700 Sobic007G025900 Sobic007G025900 Sobic002G201900--Sobic007G025900 Sobic002G201900--Sobic006G130000 Sobic003G246200 Sobic003G246200 Sobic002G201900--Sobic003G246200 Sobic006G065900 Sobic006G065900 Sobic002G201900--Sobic006G065900 Sobic002G201900--Sobic006G064200 Sobic003G397600 Sobic003G397600 Sobic002G201900--Sobic003G397600 Sobic002G201900--Sobic003G224100 Sobic002G201900--Sobic007G141700 Sobic003G339700 Sobic003G339700 Sobic003G334000--Sobic003G339700 Sobic003G381700 Sobic003G381700 Sobic003G334000--Sobic003G381700 Sobic003G277600 Sobic003G277600 Sobic003G334000--Sobic003G277600 Sobic007G062200 Sobic007G062200 Sobic003G334000--Sobic007G062200 Sobic003G372400 Sobic003G372400 Sobic003G334000--Sobic003G372400 Sobic003G051000 Sobic003G051000 Sobic003G334000--Sobic003G051000 Sobic003G334000--Sobic006G064200 Sobic003G334000--Sobic008G077500 Sobic003G334000--Sobic006G130000 Sobic003G431700 Sobic003G431700 Sobic005G089600--Sobic003G431700 Sobic003G367500 Sobic003G367500 Sobic005G089600--Sobic003G367500 Sobic008G053200 Sobic008G053200 Sobic005G089600--Sobic008G053200 Sobic003G398800 Sobic003G398800 Sobic005G089600--Sobic003G398800 Sobic002G324500 Sobic002G324500 Sobic005G089600--Sobic002G324500 Sobic003G431900 Sobic003G431900 Sobic005G089600--Sobic003G431900 Sobic001G519800 Sobic001G519800 Sobic005G089600--Sobic001G519800 Sobic002G036000 Sobic002G036000 Sobic005G089600--Sobic002G036000 Sobic003G371250 Sobic003G371250 Sobic005G089600--Sobic003G371250 Sobic009G219100 Sobic009G219100 Sobic004G154400--Sobic009G219100 Sobic001G286600 Sobic001G286600 Sobic004G154400--Sobic001G286600 Sobic004G154400--Sobic009G062400 Sobic010G058200 Sobic010G058200 Sobic004G154400--Sobic010G058200 Sobic004G154400--Sobic002G136100 Sobic009G207900 Sobic009G207900 Sobic004G154400--Sobic009G207900 Sobic004G006400 Sobic004G006400 Sobic004G154400--Sobic004G006400 Sobic009G237000 Sobic009G237000 Sobic004G154400--Sobic009G237000 Sobic006G158700 Sobic006G158700 Sobic004G154400--Sobic006G158700
Octagon: transcription factors


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