Gene annotation
Transcriptome id Sobic.007G062200.1
Synonym Sb07g004980
Functional annotation expressed protein
UniProt A0A1B6PFX4
Pfam -
Panther DB PTHR16223 PTHR16223:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G61660 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os08g08160.1 : expressed protein
MaizeGDB (Corn) Zm00025a030004 , Zm00025a054762
Brachypodium KQJ95150
Barley HORVU2Hr1G108480.9 , HORVU2Hr1G108480.3 , HORVU2Hr1G108480.1 , HORVU2Hr1G108480.7 , HORVU2Hr1G108480.6 , HORVU2Hr1G108480.10 , HORVU2Hr1G108480.13 , HORVU2Hr1G108480.12 , HORVU2Hr1G108480.11
Wheat TraesCS1A02G320300 , TraesCS1A02G320300 , TraesCS2D02G484600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G498000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
2 Sobic.003G334000 expressed protein -
3 Sobic.003G051000 expressed protein -
4 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
5 Sobic.010G102800 STELAR K+ outward rectifier(PubMedID : 26465154)@similar to Potassium outward rectifying channel(PubMedID : 29862293)@potassium channel SKOR, putative, expressed -
6 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
7 Sobic.002G200700 expressed protein -
8 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
9 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
10 Sobic.002G225100 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
11 Sobic.001G133000 expressed protein -
12 Sobic.003G282000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@suppressor of phythchrome A, putative, expressed -
13 Sobic.003G224100 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
14 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
15 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
16 Sobic.007G090900 heat shock protein-related, putative, expressed -
17 Sobic.001G160800 integral membrane protein DUF6 containing protein, expressed -
18 Sobic.008G140100 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
19 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
20 Sobic.006G212800 expressed protein -


Gene co-expression network
sample Sobic007G062200 Sobic007G062200 Sobic001G498000 Sobic001G498000 Sobic007G062200--Sobic001G498000 Sobic003G334000 Sobic003G334000 Sobic007G062200--Sobic003G334000 Sobic003G051000 Sobic003G051000 Sobic007G062200--Sobic003G051000 Sobic010G251300 Sobic010G251300 Sobic007G062200--Sobic010G251300 Sobic010G102800 Sobic010G102800 Sobic007G062200--Sobic010G102800 Sobic003G339700 Sobic003G339700 Sobic007G062200--Sobic003G339700 Sobic002G200700 Sobic002G200700 Sobic007G062200--Sobic002G200700 Sobic008G077500 Sobic008G077500 Sobic007G062200--Sobic008G077500 Sobic004G207400 Sobic004G207400 Sobic007G062200--Sobic004G207400 Sobic004G219400 Sobic004G219400 Sobic001G498000--Sobic004G219400 Sobic006G130300 Sobic006G130300 Sobic001G498000--Sobic006G130300 Sobic003G391200 Sobic003G391200 Sobic001G498000--Sobic003G391200 Sobic008G115900 Sobic008G115900 Sobic001G498000--Sobic008G115900 Sobic002G382700 Sobic002G382700 Sobic001G498000--Sobic002G382700 Sobic001G017300 Sobic001G017300 Sobic001G498000--Sobic001G017300 Sobic006G158100 Sobic006G158100 Sobic001G498000--Sobic006G158100 Sobic006G221000 Sobic006G221000 Sobic001G498000--Sobic006G221000 Sobic004G082300 Sobic004G082300 Sobic001G498000--Sobic004G082300 Sobic003G334000--Sobic003G339700 Sobic003G381700 Sobic003G381700 Sobic003G334000--Sobic003G381700 Sobic003G277600 Sobic003G277600 Sobic003G334000--Sobic003G277600 Sobic003G334000--Sobic007G062200 Sobic003G372400 Sobic003G372400 Sobic003G334000--Sobic003G372400 Sobic003G334000--Sobic003G051000 Sobic006G064200 Sobic006G064200 Sobic003G334000--Sobic006G064200 Sobic003G334000--Sobic008G077500 Sobic006G130000 Sobic006G130000 Sobic003G334000--Sobic006G130000 Sobic007G164000 Sobic007G164000 Sobic003G051000--Sobic007G164000 Sobic001G057700 Sobic001G057700 Sobic003G051000--Sobic001G057700 Sobic004G169000 Sobic004G169000 Sobic003G051000--Sobic004G169000 Sobic005G084800 Sobic005G084800 Sobic003G051000--Sobic005G084800 Sobic010G236300 Sobic010G236300 Sobic003G051000--Sobic010G236300 Sobic003G051000--Sobic001G498000 Sobic003G043300 Sobic003G043300 Sobic003G051000--Sobic003G043300 Sobic002G187700 Sobic002G187700 Sobic003G051000--Sobic002G187700 Sobic003G355900 Sobic003G355900 Sobic003G051000--Sobic003G355900 Sobic002G290400 Sobic002G290400 Sobic010G251300--Sobic002G290400 Sobic009G200800 Sobic009G200800 Sobic010G251300--Sobic009G200800 Sobic010G251300--Sobic003G043300 Sobic001G064200 Sobic001G064200 Sobic010G251300--Sobic001G064200 Sobic002G383600 Sobic002G383600 Sobic010G251300--Sobic002G383600 Sobic003G350800 Sobic003G350800 Sobic010G251300--Sobic003G350800 Sobic007G146400 Sobic007G146400 Sobic010G251300--Sobic007G146400 Sobic001G333600 Sobic001G333600 Sobic010G251300--Sobic001G333600 Sobic010G251300--Sobic001G057700 Sobic010G102800--Sobic007G062200 Sobic001G411400 Sobic001G411400 Sobic010G102800--Sobic001G411400 Sobic002G225100 Sobic002G225100 Sobic010G102800--Sobic002G225100 Sobic004G223400 Sobic004G223400 Sobic010G102800--Sobic004G223400 Sobic001G160800 Sobic001G160800 Sobic010G102800--Sobic001G160800 Sobic002G173100 Sobic002G173100 Sobic010G102800--Sobic002G173100 Sobic008G119800 Sobic008G119800 Sobic010G102800--Sobic008G119800 Sobic003G029500 Sobic003G029500 Sobic010G102800--Sobic003G029500 Sobic005G005400 Sobic005G005400 Sobic010G102800--Sobic005G005400 Sobic002G417300 Sobic002G417300 Sobic003G339700--Sobic002G417300 Sobic003G339700--Sobic003G381700 Sobic008G187100 Sobic008G187100 Sobic003G339700--Sobic008G187100 Sobic003G339700--Sobic007G146400 Sobic003G339700--Sobic001G160800 Sobic003G339700--Sobic003G334000 Sobic003G339700--Sobic001G057700 Sobic009G069300 Sobic009G069300 Sobic003G339700--Sobic009G069300 Sobic006G066800 Sobic006G066800 Sobic003G339700--Sobic006G066800 Sobic003G224100 Sobic003G224100 Sobic002G200700--Sobic003G224100 Sobic002G001000 Sobic002G001000 Sobic002G200700--Sobic002G001000 Sobic002G201900 Sobic002G201900 Sobic002G200700--Sobic002G201900 Sobic003G007700 Sobic003G007700 Sobic002G200700--Sobic003G007700 Sobic002G200700--Sobic006G064200 Sobic010G269400 Sobic010G269400 Sobic002G200700--Sobic010G269400 Sobic002G136100 Sobic002G136100 Sobic002G200700--Sobic002G136100 Sobic002G200700--Sobic006G130000 Sobic006G258700 Sobic006G258700 Sobic002G200700--Sobic006G258700 Sobic007G090900 Sobic007G090900 Sobic008G077500--Sobic007G090900 Sobic004G268300 Sobic004G268300 Sobic008G077500--Sobic004G268300 Sobic001G243200 Sobic001G243200 Sobic008G077500--Sobic001G243200 Sobic008G052900 Sobic008G052900 Sobic008G077500--Sobic008G052900 Sobic009G103000 Sobic009G103000 Sobic008G077500--Sobic009G103000 Sobic006G212800 Sobic006G212800 Sobic008G077500--Sobic006G212800 Sobic003G157900 Sobic003G157900 Sobic008G077500--Sobic003G157900 Sobic003G260100 Sobic003G260100 Sobic008G077500--Sobic003G260100 Sobic002G162400 Sobic002G162400 Sobic008G077500--Sobic002G162400 Sobic002G072400 Sobic002G072400 Sobic004G207400--Sobic002G072400 Sobic006G232600 Sobic006G232600 Sobic004G207400--Sobic006G232600 Sobic004G238200 Sobic004G238200 Sobic004G207400--Sobic004G238200 Sobic009G170200 Sobic009G170200 Sobic004G207400--Sobic009G170200 Sobic003G203300 Sobic003G203300 Sobic004G207400--Sobic003G203300 Sobic004G207400--Sobic002G225100 Sobic004G300100 Sobic004G300100 Sobic004G207400--Sobic004G300100 Sobic004G281900 Sobic004G281900 Sobic004G207400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic004G207400--Sobic007G166200
Octagon: transcription factors


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