Gene annotation
Transcriptome id Sobic.003G260100.1
Synonym
Functional annotation -
UniProt A0A1B6Q5D8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G162400 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
2 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G263100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
4 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
5 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
6 Sobic.001G077300 thioredoxin, putative, expressed -
7 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
8 Sobic.009G103000 ubiquitin family protein, putative, expressed -
9 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
10 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
11 Sobic.009G073900 thioredoxin, putative, expressed -
12 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
13 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
14 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
15 Sobic.008G077500 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
16 Sobic.005G217000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os11bglu36 SFR2 homologue, expressed -
17 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
18 Sobic.009G038701 - -
19 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
20 Sobic.003G409700 rieske domain containing protein, expressed -


Gene co-expression network
sample Sobic003G260100 Sobic003G260100 Sobic002G162400 Sobic002G162400 Sobic003G260100--Sobic002G162400 Sobic008G129900 Sobic008G129900 Sobic003G260100--Sobic008G129900 Sobic001G263100 Sobic001G263100 Sobic003G260100--Sobic001G263100 Sobic002G206300 Sobic002G206300 Sobic003G260100--Sobic002G206300 Sobic001G217900 Sobic001G217900 Sobic003G260100--Sobic001G217900 Sobic001G077300 Sobic001G077300 Sobic003G260100--Sobic001G077300 Sobic001G244700 Sobic001G244700 Sobic003G260100--Sobic001G244700 Sobic009G103000 Sobic009G103000 Sobic003G260100--Sobic009G103000 Sobic010G231300 Sobic010G231300 Sobic003G260100--Sobic010G231300 Sobic003G341300 Sobic003G341300 Sobic002G162400--Sobic003G341300 Sobic002G162400--Sobic001G263100 Sobic001G180200 Sobic001G180200 Sobic002G162400--Sobic001G180200 Sobic002G162400--Sobic002G206300 Sobic002G162400--Sobic010G231300 Sobic006G235400 Sobic006G235400 Sobic002G162400--Sobic006G235400 Sobic002G162400--Sobic001G077300 Sobic001G258200 Sobic001G258200 Sobic002G162400--Sobic001G258200 Sobic002G162400--Sobic008G129900 Sobic008G129900--Sobic010G231300 Sobic008G033000 Sobic008G033000 Sobic008G129900--Sobic008G033000 Sobic008G129900--Sobic001G258200 Sobic008G129900--Sobic001G217900 Sobic008G129900--Sobic006G235400 Sobic003G097600 Sobic003G097600 Sobic008G129900--Sobic003G097600 Sobic008G129900--Sobic001G263100 Sobic008G129900--Sobic002G206300 Sobic008G129900--Sobic003G341300 Sobic007G058100 Sobic007G058100 Sobic001G263100--Sobic007G058100 Sobic001G263100--Sobic010G231300 Sobic001G263100--Sobic008G129900 Sobic001G263100--Sobic002G162400 Sobic001G263100--Sobic001G180200 Sobic001G263100--Sobic001G217900 Sobic001G263100--Sobic003G341300 Sobic001G263100--Sobic002G206300 Sobic001G263100--Sobic006G235400 Sobic009G038701 Sobic009G038701 Sobic002G206300--Sobic009G038701 Sobic001G504400 Sobic001G504400 Sobic002G206300--Sobic001G504400 Sobic002G206300--Sobic001G180200 Sobic001G536700 Sobic001G536700 Sobic002G206300--Sobic001G536700 Sobic009G207900 Sobic009G207900 Sobic002G206300--Sobic009G207900 Sobic002G206300--Sobic001G258200 Sobic002G206300--Sobic008G129900 Sobic002G206300--Sobic001G217900 Sobic002G206300--Sobic003G341300 Sobic001G217900--Sobic007G058100 Sobic001G217900--Sobic010G231300 Sobic001G217900--Sobic008G129900 Sobic001G378100 Sobic001G378100 Sobic001G217900--Sobic001G378100 Sobic001G217900--Sobic001G258200 Sobic001G217900--Sobic002G206300 Sobic001G217900--Sobic001G263100 Sobic001G217900--Sobic008G033000 Sobic001G540600 Sobic001G540600 Sobic001G217900--Sobic001G540600 Sobic009G073900 Sobic009G073900 Sobic001G077300--Sobic009G073900 Sobic006G090100 Sobic006G090100 Sobic001G077300--Sobic006G090100 Sobic001G077300--Sobic006G235400 Sobic004G127800 Sobic004G127800 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic009G093100 Sobic009G093100 Sobic001G077300--Sobic009G093100 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic002G404800 Sobic002G404800 Sobic001G244700--Sobic002G404800 Sobic002G196600 Sobic002G196600 Sobic001G244700--Sobic002G196600 Sobic009G038900 Sobic009G038900 Sobic001G244700--Sobic009G038900 Sobic001G244600 Sobic001G244600 Sobic001G244700--Sobic001G244600 Sobic001G244700--Sobic001G217900 Sobic010G085100 Sobic010G085100 Sobic001G244700--Sobic010G085100 Sobic006G259800 Sobic006G259800 Sobic001G244700--Sobic006G259800 Sobic001G244700--Sobic003G260100 Sobic001G244700--Sobic008G033000 Sobic007G087100 Sobic007G087100 Sobic009G103000--Sobic007G087100 Sobic009G103000--Sobic001G077300 Sobic009G170200 Sobic009G170200 Sobic009G103000--Sobic009G170200 Sobic009G103000--Sobic009G073900 Sobic009G103000--Sobic003G003450 Sobic006G232600 Sobic006G232600 Sobic009G103000--Sobic006G232600 Sobic006G213700 Sobic006G213700 Sobic009G103000--Sobic006G213700 Sobic009G103000--Sobic001G378100 Sobic009G103000--Sobic006G212800 Sobic010G231300--Sobic008G129900 Sobic010G231300--Sobic006G235400 Sobic010G231300--Sobic001G217900 Sobic010G231300--Sobic001G263100 Sobic006G161500 Sobic006G161500 Sobic010G231300--Sobic006G161500 Sobic007G133000 Sobic007G133000 Sobic010G231300--Sobic007G133000 Sobic010G231300--Sobic003G341300 Sobic010G231300--Sobic001G180200 Sobic010G231300--Sobic002G162400
Octagon: transcription factors


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