Gene annotation
Transcriptome id Sobic.008G065200.3
Synonym Sb08g005450
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
receptor protein kinase, putative, expressed
UniProt A0A1Z5R574
Pfam PF08263 PF07714 PF00560 PF13855
Panther DB PTHR27000 PTHR27000:SF30
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os11g10310.1 : receptor-like protein kinase 2 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
2 Sobic.010G193000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
4 Sobic.002G362100 expressed protein -
5 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
6 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
8 Sobic.003G255900 expressed protein -
9 Sobic.003G014300 expressed protein -
10 Sobic.002G001900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
11 Sobic.002G046900 HNH endonuclease domain-containing protein, putative, expressed -
12 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
14 Sobic.009G019100 expressed protein K13473: chitin elicitor-binding protein
15 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
16 Sobic.010G205700 Leucine Rich Repeat family protein, expressed -
17 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
18 Sobic.005G203300 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
19 Sobic.003G410900 CRAL/TRIO domain containing protein, expressed -
20 Sobic.009G189000 expressed protein -


Gene co-expression network
sample Sobic008G065200 Sobic008G065200 Sobic004G268500 Sobic004G268500 Sobic008G065200--Sobic004G268500 Sobic010G193000 Sobic010G193000 Sobic008G065200--Sobic010G193000 Sobic006G123500 Sobic006G123500 Sobic008G065200--Sobic006G123500 Sobic002G362100 Sobic002G362100 Sobic008G065200--Sobic002G362100 Sobic001G404500 Sobic001G404500 Sobic008G065200--Sobic001G404500 Sobic004G099700 Sobic004G099700 Sobic008G065200--Sobic004G099700 Sobic006G258700 Sobic006G258700 Sobic008G065200--Sobic006G258700 Sobic003G255900 Sobic003G255900 Sobic008G065200--Sobic003G255900 Sobic003G014300 Sobic003G014300 Sobic008G065200--Sobic003G014300 Sobic004G268500--Sobic006G123500 Sobic004G268500--Sobic008G065200 Sobic003G284800 Sobic003G284800 Sobic004G268500--Sobic003G284800 Sobic004G268500--Sobic001G404500 Sobic001G071200 Sobic001G071200 Sobic004G268500--Sobic001G071200 Sobic003G292600 Sobic003G292600 Sobic004G268500--Sobic003G292600 Sobic002G046900 Sobic002G046900 Sobic004G268500--Sobic002G046900 Sobic002G025700 Sobic002G025700 Sobic004G268500--Sobic002G025700 Sobic004G268500--Sobic002G362100 Sobic005G203300 Sobic005G203300 Sobic010G193000--Sobic005G203300 Sobic010G193000--Sobic008G065200 Sobic009G037200 Sobic009G037200 Sobic010G193000--Sobic009G037200 Sobic002G257100 Sobic002G257100 Sobic010G193000--Sobic002G257100 Sobic004G224500 Sobic004G224500 Sobic010G193000--Sobic004G224500 Sobic010G193000--Sobic004G099700 Sobic010G193000--Sobic001G404500 Sobic001G314900 Sobic001G314900 Sobic010G193000--Sobic001G314900 Sobic010G193000--Sobic002G046900 Sobic006G123500--Sobic004G268500 Sobic006G123500--Sobic001G404500 Sobic006G123500--Sobic004G099700 Sobic005G187900 Sobic005G187900 Sobic006G123500--Sobic005G187900 Sobic006G123500--Sobic003G284800 Sobic006G123500--Sobic002G046900 Sobic004G063200 Sobic004G063200 Sobic006G123500--Sobic004G063200 Sobic006G123500--Sobic008G065200 Sobic002G001900 Sobic002G001900 Sobic006G123500--Sobic002G001900 Sobic010G207500 Sobic010G207500 Sobic002G362100--Sobic010G207500 Sobic001G351400 Sobic001G351400 Sobic002G362100--Sobic001G351400 Sobic002G362100--Sobic001G404500 Sobic002G362100--Sobic008G065200 Sobic009G023401 Sobic009G023401 Sobic002G362100--Sobic009G023401 Sobic002G362100--Sobic004G268500 Sobic002G362100--Sobic006G258700 Sobic002G362100--Sobic006G123500 Sobic002G362100--Sobic002G046900 Sobic001G404500--Sobic006G123500 Sobic001G404500--Sobic004G063200 Sobic002G281000 Sobic002G281000 Sobic001G404500--Sobic002G281000 Sobic008G063100 Sobic008G063100 Sobic001G404500--Sobic008G063100 Sobic001G525900 Sobic001G525900 Sobic001G404500--Sobic001G525900 Sobic003G410900 Sobic003G410900 Sobic001G404500--Sobic003G410900 Sobic001G404500--Sobic004G268500 Sobic009G189000 Sobic009G189000 Sobic001G404500--Sobic009G189000 Sobic001G404500--Sobic004G099700 Sobic004G099700--Sobic006G123500 Sobic004G099700--Sobic001G404500 Sobic007G025900 Sobic007G025900 Sobic004G099700--Sobic007G025900 Sobic008G060300 Sobic008G060300 Sobic004G099700--Sobic008G060300 Sobic004G099700--Sobic004G063200 Sobic004G099700--Sobic003G410900 Sobic004G099700--Sobic008G065200 Sobic006G164300 Sobic006G164300 Sobic004G099700--Sobic006G164300 Sobic004G099700--Sobic010G193000 Sobic006G258700--Sobic003G014300 Sobic010G269400 Sobic010G269400 Sobic006G258700--Sobic010G269400 Sobic004G298900 Sobic004G298900 Sobic006G258700--Sobic004G298900 Sobic006G258700--Sobic001G351400 Sobic003G037300 Sobic003G037300 Sobic006G258700--Sobic003G037300 Sobic010G189200 Sobic010G189200 Sobic006G258700--Sobic010G189200 Sobic004G300000 Sobic004G300000 Sobic006G258700--Sobic004G300000 Sobic001G286600 Sobic001G286600 Sobic006G258700--Sobic001G286600 Sobic006G258700--Sobic001G404500 Sobic003G026600 Sobic003G026600 Sobic003G255900--Sobic003G026600 Sobic006G055000 Sobic006G055000 Sobic003G255900--Sobic006G055000 Sobic003G255900--Sobic008G065200 Sobic003G255900--Sobic004G099700 Sobic007G141700 Sobic007G141700 Sobic003G255900--Sobic007G141700 Sobic003G255900--Sobic004G268500 Sobic003G255900--Sobic005G203300 Sobic003G255900--Sobic006G123500 Sobic002G136100 Sobic002G136100 Sobic003G255900--Sobic002G136100 Sobic003G014300--Sobic006G258700 Sobic003G014300--Sobic004G298900 Sobic003G014300--Sobic010G269400 Sobic003G014300--Sobic004G300000 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic005G175500 Sobic005G175500 Sobic003G014300--Sobic005G175500 Sobic010G035500 Sobic010G035500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.