Gene annotation
Transcriptome id Sobic.003G397600.1
Synonym Sb03g043430
Functional annotation expressed protein
UniProt C5XFL1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g68300.1 : expressed protein
MaizeGDB (Corn) Zm00025a039392
Brachypodium KQK11135
Barley HORVU3Hr1G092520.1 , HORVU3Hr1G092520.2
Wheat -
Populus -


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cDNA sequences
Sobic.003G397600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G136100 genetic modifier, putative, expressed -
2 Sobic.003G328100 expressed protein -
3 Sobic.001G314400 OsMADS56 - MADS-box family gene with MIKCc type-box, expressed -
4 Sobic.008G046400 - -
5 Sobic.006G145700 Probable inactive beta-glucosidase 14 (Precursor)(PubMedID : 26186930)@Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed K05350: beta-glucosidase
6 Sobic.006G140700 "aldo/keto reductase (AKR) family protein, up-regulated under drought stress , maped into a unique stay green QTL(QSTG3_6)"(PubMedID : 24655390)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.003G437800 abscisic stress-ripening, putative, expressed -
8 Sobic.010G177800 RALFL28 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
9 Sobic.003G329700 VQ motif family protein, expressed -
10 Sobic.002G046900 HNH endonuclease domain-containing protein, putative, expressed -
11 Sobic.005G186700 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
12 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
13 Sobic.003G026600 osFTL8 FT-Like8 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
14 Sobic.004G154400 drought-induced protein 1, putative, expressed -
15 Sobic.006G026100 expressed protein -
16 Sobic.003G097500 - -
17 Sobic.007G107700 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
18 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
19 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
20 Sobic.002G201900 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic003G397600 Sobic003G397600 Sobic002G136100 Sobic002G136100 Sobic003G397600--Sobic002G136100 Sobic003G328100 Sobic003G328100 Sobic003G397600--Sobic003G328100 Sobic001G314400 Sobic001G314400 Sobic003G397600--Sobic001G314400 Sobic008G046400 Sobic008G046400 Sobic003G397600--Sobic008G046400 Sobic006G145700 Sobic006G145700 Sobic003G397600--Sobic006G145700 Sobic006G140700 Sobic006G140700 Sobic003G397600--Sobic006G140700 Sobic003G437800 Sobic003G437800 Sobic003G397600--Sobic003G437800 Sobic010G177800 Sobic010G177800 Sobic003G397600--Sobic010G177800 Sobic003G329700 Sobic003G329700 Sobic003G397600--Sobic003G329700 Sobic004G154400 Sobic004G154400 Sobic002G136100--Sobic004G154400 Sobic006G212800 Sobic006G212800 Sobic002G136100--Sobic006G212800 Sobic009G207900 Sobic009G207900 Sobic002G136100--Sobic009G207900 Sobic010G058200 Sobic010G058200 Sobic002G136100--Sobic010G058200 Sobic001G286600 Sobic001G286600 Sobic002G136100--Sobic001G286600 Sobic002G136100--Sobic003G328100 Sobic009G062400 Sobic009G062400 Sobic002G136100--Sobic009G062400 Sobic003G157900 Sobic003G157900 Sobic002G136100--Sobic003G157900 Sobic007G015500 Sobic007G015500 Sobic002G136100--Sobic007G015500 Sobic007G169100 Sobic007G169100 Sobic003G328100--Sobic007G169100 Sobic001G118400 Sobic001G118400 Sobic003G328100--Sobic001G118400 Sobic006G155500 Sobic006G155500 Sobic003G328100--Sobic006G155500 Sobic003G328100--Sobic006G140700 Sobic007G107700 Sobic007G107700 Sobic003G328100--Sobic007G107700 Sobic003G328100--Sobic001G286600 Sobic010G231500 Sobic010G231500 Sobic003G328100--Sobic010G231500 Sobic004G281900 Sobic004G281900 Sobic003G328100--Sobic004G281900 Sobic006G097500 Sobic006G097500 Sobic003G328100--Sobic006G097500 Sobic002G001900 Sobic002G001900 Sobic001G314400--Sobic002G001900 Sobic001G314400--Sobic003G397600 Sobic005G142700 Sobic005G142700 Sobic001G314400--Sobic005G142700 Sobic003G223400 Sobic003G223400 Sobic001G314400--Sobic003G223400 Sobic001G314400--Sobic003G329700 Sobic001G448300 Sobic001G448300 Sobic001G314400--Sobic001G448300 Sobic002G272700 Sobic002G272700 Sobic001G314400--Sobic002G272700 Sobic006G036300 Sobic006G036300 Sobic001G314400--Sobic006G036300 Sobic006G123500 Sobic006G123500 Sobic001G314400--Sobic006G123500 Sobic002G100200 Sobic002G100200 Sobic008G046400--Sobic002G100200 Sobic008G046400--Sobic003G397600 Sobic002G108500 Sobic002G108500 Sobic008G046400--Sobic002G108500 Sobic010G130800 Sobic010G130800 Sobic008G046400--Sobic010G130800 Sobic008G046400--Sobic010G177800 Sobic007G215500 Sobic007G215500 Sobic008G046400--Sobic007G215500 Sobic010G178000 Sobic010G178000 Sobic008G046400--Sobic010G178000 Sobic001G209200 Sobic001G209200 Sobic008G046400--Sobic001G209200 Sobic008G046400--Sobic002G272700 Sobic006G145700--Sobic006G036300 Sobic006G145700--Sobic010G178000 Sobic002G213400 Sobic002G213400 Sobic006G145700--Sobic002G213400 Sobic006G145700--Sobic010G177800 Sobic001G411100 Sobic001G411100 Sobic006G145700--Sobic001G411100 Sobic001G104700 Sobic001G104700 Sobic006G145700--Sobic001G104700 Sobic010G207100 Sobic010G207100 Sobic006G145700--Sobic010G207100 Sobic001G434000 Sobic001G434000 Sobic006G145700--Sobic001G434000 Sobic006G041000 Sobic006G041000 Sobic006G145700--Sobic006G041000 Sobic006G025400 Sobic006G025400 Sobic006G140700--Sobic006G025400 Sobic006G140700--Sobic003G328100 Sobic006G140700--Sobic007G169100 Sobic002G061900 Sobic002G061900 Sobic006G140700--Sobic002G061900 Sobic006G140700--Sobic001G118400 Sobic004G165900 Sobic004G165900 Sobic006G140700--Sobic004G165900 Sobic006G140700--Sobic006G097500 Sobic006G140700--Sobic006G155500 Sobic006G140700--Sobic010G231500 Sobic003G437800--Sobic003G397600 Sobic002G001000 Sobic002G001000 Sobic003G437800--Sobic002G001000 Sobic001G292000 Sobic001G292000 Sobic003G437800--Sobic001G292000 Sobic003G437800--Sobic006G145700 Sobic002G072100 Sobic002G072100 Sobic003G437800--Sobic002G072100 Sobic002G072400 Sobic002G072400 Sobic003G437800--Sobic002G072400 Sobic003G437800--Sobic010G177800 Sobic009G187400 Sobic009G187400 Sobic003G437800--Sobic009G187400 Sobic004G207400 Sobic004G207400 Sobic003G437800--Sobic004G207400 Sobic010G177800--Sobic006G145700 Sobic010G177800--Sobic010G178000 Sobic010G177800--Sobic003G397600 Sobic010G177800--Sobic008G046400 Sobic010G177800--Sobic007G215500 Sobic008G115700 Sobic008G115700 Sobic010G177800--Sobic008G115700 Sobic010G177800--Sobic006G041000 Sobic003G188200 Sobic003G188200 Sobic010G177800--Sobic003G188200 Sobic010G177800--Sobic002G108500 Sobic003G329700--Sobic006G041000 Sobic007G121300 Sobic007G121300 Sobic003G329700--Sobic007G121300 Sobic003G329700--Sobic003G397600 Sobic003G329700--Sobic002G108500 Sobic003G329700--Sobic005G142700 Sobic003G329700--Sobic003G157900 Sobic009G259100 Sobic009G259100 Sobic003G329700--Sobic009G259100 Sobic003G329700--Sobic006G212800 Sobic002G275100 Sobic002G275100 Sobic003G329700--Sobic002G275100
Octagon: transcription factors


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