Gene annotation
Transcriptome id Sobic.010G177800.1
Synonym
Functional annotation RALFL28 - Rapid ALkalinization Factor RALF family protein precursor, expressed
UniProt A0A194YJV5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g29730.1 : RALFL28 - Rapid ALkalinization Factor RALF family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.010G177800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G145700 Probable inactive beta-glucosidase 14 (Precursor)(PubMedID : 26186930)@Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed K05350: beta-glucosidase
2 Sobic.010G178000 - -
3 Sobic.003G397600 expressed protein -
4 Sobic.008G046400 - -
5 Sobic.007G215500 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
6 Sobic.008G115700 MLA12, putative, expressed -
7 Sobic.006G041000 "Oxidoreductase, zinc-binding dehydrogenase family protein"("PubMedID : 26759170,PubMedID : 24597475")@dehydrogenase, putative, expressed -
8 Sobic.003G188200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
9 Sobic.002G108500 cytochrome P450, putative, expressed -
10 Sobic.006G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
11 Sobic.002G100200 expressed protein -
12 Sobic.003G437800 abscisic stress-ripening, putative, expressed -
13 Sobic.002G072100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G329700 VQ motif family protein, expressed -
15 Sobic.002G321300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pleiotropic drug resistance protein, putative, expressed -
16 Sobic.004G163200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
17 Sobic.004G223400 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
18 Sobic.002G275200 PPR repeat containing protein, expressed -
19 Sobic.009G259100 CCT motif family protein, expressed -
20 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G177800 Sobic010G177800 Sobic006G145700 Sobic006G145700 Sobic010G177800--Sobic006G145700 Sobic010G178000 Sobic010G178000 Sobic010G177800--Sobic010G178000 Sobic003G397600 Sobic003G397600 Sobic010G177800--Sobic003G397600 Sobic008G046400 Sobic008G046400 Sobic010G177800--Sobic008G046400 Sobic007G215500 Sobic007G215500 Sobic010G177800--Sobic007G215500 Sobic008G115700 Sobic008G115700 Sobic010G177800--Sobic008G115700 Sobic006G041000 Sobic006G041000 Sobic010G177800--Sobic006G041000 Sobic003G188200 Sobic003G188200 Sobic010G177800--Sobic003G188200 Sobic002G108500 Sobic002G108500 Sobic010G177800--Sobic002G108500 Sobic006G036300 Sobic006G036300 Sobic006G145700--Sobic006G036300 Sobic006G145700--Sobic010G178000 Sobic002G213400 Sobic002G213400 Sobic006G145700--Sobic002G213400 Sobic006G145700--Sobic010G177800 Sobic001G411100 Sobic001G411100 Sobic006G145700--Sobic001G411100 Sobic001G104700 Sobic001G104700 Sobic006G145700--Sobic001G104700 Sobic010G207100 Sobic010G207100 Sobic006G145700--Sobic010G207100 Sobic001G434000 Sobic001G434000 Sobic006G145700--Sobic001G434000 Sobic006G145700--Sobic006G041000 Sobic010G178000--Sobic006G036300 Sobic003G154400 Sobic003G154400 Sobic010G178000--Sobic003G154400 Sobic010G178000--Sobic010G207100 Sobic010G178000--Sobic002G108500 Sobic010G178000--Sobic001G434000 Sobic010G178000--Sobic006G145700 Sobic005G002400 Sobic005G002400 Sobic010G178000--Sobic005G002400 Sobic006G020300 Sobic006G020300 Sobic010G178000--Sobic006G020300 Sobic004G190100 Sobic004G190100 Sobic010G178000--Sobic004G190100 Sobic002G136100 Sobic002G136100 Sobic003G397600--Sobic002G136100 Sobic003G328100 Sobic003G328100 Sobic003G397600--Sobic003G328100 Sobic001G314400 Sobic001G314400 Sobic003G397600--Sobic001G314400 Sobic003G397600--Sobic008G046400 Sobic003G397600--Sobic006G145700 Sobic006G140700 Sobic006G140700 Sobic003G397600--Sobic006G140700 Sobic003G437800 Sobic003G437800 Sobic003G397600--Sobic003G437800 Sobic003G397600--Sobic010G177800 Sobic003G329700 Sobic003G329700 Sobic003G397600--Sobic003G329700 Sobic002G100200 Sobic002G100200 Sobic008G046400--Sobic002G100200 Sobic008G046400--Sobic003G397600 Sobic008G046400--Sobic002G108500 Sobic010G130800 Sobic010G130800 Sobic008G046400--Sobic010G130800 Sobic008G046400--Sobic010G177800 Sobic008G046400--Sobic007G215500 Sobic008G046400--Sobic010G178000 Sobic001G209200 Sobic001G209200 Sobic008G046400--Sobic001G209200 Sobic002G272700 Sobic002G272700 Sobic008G046400--Sobic002G272700 Sobic007G215500--Sobic002G100200 Sobic010G273700 Sobic010G273700 Sobic007G215500--Sobic010G273700 Sobic007G215500--Sobic008G046400 Sobic007G215500--Sobic010G177800 Sobic007G215500--Sobic003G397600 Sobic003G138400 Sobic003G138400 Sobic007G215500--Sobic003G138400 Sobic007G215500--Sobic010G130800 Sobic007G025900 Sobic007G025900 Sobic007G215500--Sobic007G025900 Sobic007G215500--Sobic001G209200 Sobic004G223400 Sobic004G223400 Sobic008G115700--Sobic004G223400 Sobic008G115700--Sobic010G178000 Sobic001G313000 Sobic001G313000 Sobic008G115700--Sobic001G313000 Sobic009G018600 Sobic009G018600 Sobic008G115700--Sobic009G018600 Sobic004G344600 Sobic004G344600 Sobic008G115700--Sobic004G344600 Sobic008G115700--Sobic010G177800 Sobic008G115700--Sobic003G154400 Sobic008G115700--Sobic006G041000 Sobic009G259100 Sobic009G259100 Sobic008G115700--Sobic009G259100 Sobic006G041000--Sobic009G259100 Sobic006G041000--Sobic004G190100 Sobic001G112900 Sobic001G112900 Sobic006G041000--Sobic001G112900 Sobic003G440300 Sobic003G440300 Sobic006G041000--Sobic003G440300 Sobic004G267700 Sobic004G267700 Sobic006G041000--Sobic004G267700 Sobic002G351200 Sobic002G351200 Sobic006G041000--Sobic002G351200 Sobic006G041000--Sobic002G213400 Sobic007G121300 Sobic007G121300 Sobic006G041000--Sobic007G121300 Sobic003G304300 Sobic003G304300 Sobic006G041000--Sobic003G304300 Sobic002G052000 Sobic002G052000 Sobic003G188200--Sobic002G052000 Sobic002G052100 Sobic002G052100 Sobic003G188200--Sobic002G052100 Sobic003G188200--Sobic003G440300 Sobic003G326000 Sobic003G326000 Sobic003G188200--Sobic003G326000 Sobic003G188200--Sobic005G002400 Sobic001G181100 Sobic001G181100 Sobic003G188200--Sobic001G181100 Sobic003G188200--Sobic004G190100 Sobic004G323400 Sobic004G323400 Sobic003G188200--Sobic004G323400 Sobic008G002400 Sobic008G002400 Sobic003G188200--Sobic008G002400 Sobic002G108500--Sobic010G178000 Sobic004G214800 Sobic004G214800 Sobic002G108500--Sobic004G214800 Sobic002G108500--Sobic001G112900 Sobic002G108500--Sobic006G036300 Sobic002G108500--Sobic003G154400 Sobic002G108500--Sobic004G267700 Sobic003G339200 Sobic003G339200 Sobic002G108500--Sobic003G339200 Sobic002G108500--Sobic005G002400 Sobic002G108500--Sobic003G326000
Octagon: transcription factors


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