Gene annotation
Transcriptome id Sobic.003G437800.1
Synonym
Functional annotation abscisic stress-ripening, putative, expressed
UniProt A0A1B6Q8F5
Pfam PF02496
Panther DB PTHR33801 PTHR33801:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g73250.1 : abscisic stress-ripening, putative, expressed
MaizeGDB (Corn) Zm00025a039070
Brachypodium -
Barley HORVU3Hr1G112010.2 , HORVU3Hr1G112010.1
Wheat TraesCS3D02G517100 , TraesCS3D02G517300 , TraesCS3B02G578200 , TraesCS3A02G510100 , TraesCS3A02G509900
Populus -


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cDNA sequences
Sobic.003G437800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G397600 expressed protein -
2 Sobic.002G001000 transmembrane amino acid transporter protein, putative, expressed -
3 Sobic.001G292000 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
4 Sobic.006G145700 Probable inactive beta-glucosidase 14 (Precursor)(PubMedID : 26186930)@Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed K05350: beta-glucosidase
5 Sobic.002G072100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
7 Sobic.010G177800 RALFL28 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
8 Sobic.009G187400 heat shock protein, putative, expressed -
9 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
10 Sobic.005G186700 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
11 Sobic.002G200900 alpha/beta hydrolase fold, putative, expressed -
12 Sobic.006G041000 "Oxidoreductase, zinc-binding dehydrogenase family protein"("PubMedID : 26759170,PubMedID : 24597475")@dehydrogenase, putative, expressed -
13 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
14 Sobic.002G136100 genetic modifier, putative, expressed -
15 Sobic.004G281900 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative, expressed K01770: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
16 Sobic.009G241100 expressed protein -
17 Sobic.006G140700 "aldo/keto reductase (AKR) family protein, up-regulated under drought stress , maped into a unique stay green QTL(QSTG3_6)"(PubMedID : 24655390)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
19 Sobic.003G328100 expressed protein -
20 Sobic.006G201100 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4


Gene co-expression network
sample Sobic003G437800 Sobic003G437800 Sobic003G397600 Sobic003G397600 Sobic003G437800--Sobic003G397600 Sobic002G001000 Sobic002G001000 Sobic003G437800--Sobic002G001000 Sobic001G292000 Sobic001G292000 Sobic003G437800--Sobic001G292000 Sobic006G145700 Sobic006G145700 Sobic003G437800--Sobic006G145700 Sobic002G072100 Sobic002G072100 Sobic003G437800--Sobic002G072100 Sobic002G072400 Sobic002G072400 Sobic003G437800--Sobic002G072400 Sobic010G177800 Sobic010G177800 Sobic003G437800--Sobic010G177800 Sobic009G187400 Sobic009G187400 Sobic003G437800--Sobic009G187400 Sobic004G207400 Sobic004G207400 Sobic003G437800--Sobic004G207400 Sobic002G136100 Sobic002G136100 Sobic003G397600--Sobic002G136100 Sobic003G328100 Sobic003G328100 Sobic003G397600--Sobic003G328100 Sobic001G314400 Sobic001G314400 Sobic003G397600--Sobic001G314400 Sobic008G046400 Sobic008G046400 Sobic003G397600--Sobic008G046400 Sobic003G397600--Sobic006G145700 Sobic006G140700 Sobic006G140700 Sobic003G397600--Sobic006G140700 Sobic003G397600--Sobic003G437800 Sobic003G397600--Sobic010G177800 Sobic003G329700 Sobic003G329700 Sobic003G397600--Sobic003G329700 Sobic007G227700 Sobic007G227700 Sobic002G001000--Sobic007G227700 Sobic002G200700 Sobic002G200700 Sobic002G001000--Sobic002G200700 Sobic002G001000--Sobic004G207400 Sobic010G140600 Sobic010G140600 Sobic002G001000--Sobic010G140600 Sobic001G072700 Sobic001G072700 Sobic002G001000--Sobic001G072700 Sobic010G013200 Sobic010G013200 Sobic002G001000--Sobic010G013200 Sobic008G089900 Sobic008G089900 Sobic002G001000--Sobic008G089900 Sobic003G403500 Sobic003G403500 Sobic002G001000--Sobic003G403500 Sobic003G224100 Sobic003G224100 Sobic002G001000--Sobic003G224100 Sobic003G313900 Sobic003G313900 Sobic001G292000--Sobic003G313900 Sobic009G190600 Sobic009G190600 Sobic001G292000--Sobic009G190600 Sobic005G062700 Sobic005G062700 Sobic001G292000--Sobic005G062700 Sobic001G292000--Sobic003G437800 Sobic003G051000 Sobic003G051000 Sobic001G292000--Sobic003G051000 Sobic003G425300 Sobic003G425300 Sobic001G292000--Sobic003G425300 Sobic001G292000--Sobic008G089900 Sobic001G104900 Sobic001G104900 Sobic001G292000--Sobic001G104900 Sobic009G129800 Sobic009G129800 Sobic001G292000--Sobic009G129800 Sobic006G036300 Sobic006G036300 Sobic006G145700--Sobic006G036300 Sobic010G178000 Sobic010G178000 Sobic006G145700--Sobic010G178000 Sobic002G213400 Sobic002G213400 Sobic006G145700--Sobic002G213400 Sobic006G145700--Sobic010G177800 Sobic001G411100 Sobic001G411100 Sobic006G145700--Sobic001G411100 Sobic001G104700 Sobic001G104700 Sobic006G145700--Sobic001G104700 Sobic010G207100 Sobic010G207100 Sobic006G145700--Sobic010G207100 Sobic001G434000 Sobic001G434000 Sobic006G145700--Sobic001G434000 Sobic006G041000 Sobic006G041000 Sobic006G145700--Sobic006G041000 Sobic001G029200 Sobic001G029200 Sobic002G072100--Sobic001G029200 Sobic001G413000 Sobic001G413000 Sobic002G072100--Sobic001G413000 Sobic010G035500 Sobic010G035500 Sobic002G072100--Sobic010G035500 Sobic010G272800 Sobic010G272800 Sobic002G072100--Sobic010G272800 Sobic006G259600 Sobic006G259600 Sobic002G072100--Sobic006G259600 Sobic008G081900 Sobic008G081900 Sobic002G072100--Sobic008G081900 Sobic008G027200 Sobic008G027200 Sobic002G072100--Sobic008G027200 Sobic001G086800 Sobic001G086800 Sobic002G072100--Sobic001G086800 Sobic003G129600 Sobic003G129600 Sobic002G072100--Sobic003G129600 Sobic002G072400--Sobic004G207400 Sobic002G349100 Sobic002G349100 Sobic002G072400--Sobic002G349100 Sobic004G317700 Sobic004G317700 Sobic002G072400--Sobic004G317700 Sobic004G238200 Sobic004G238200 Sobic002G072400--Sobic004G238200 Sobic002G129400 Sobic002G129400 Sobic002G072400--Sobic002G129400 Sobic004G307100 Sobic004G307100 Sobic002G072400--Sobic004G307100 Sobic004G281900 Sobic004G281900 Sobic002G072400--Sobic004G281900 Sobic007G166200 Sobic007G166200 Sobic002G072400--Sobic007G166200 Sobic002G081400 Sobic002G081400 Sobic002G072400--Sobic002G081400 Sobic010G177800--Sobic006G145700 Sobic010G177800--Sobic010G178000 Sobic010G177800--Sobic003G397600 Sobic010G177800--Sobic008G046400 Sobic007G215500 Sobic007G215500 Sobic010G177800--Sobic007G215500 Sobic008G115700 Sobic008G115700 Sobic010G177800--Sobic008G115700 Sobic010G177800--Sobic006G041000 Sobic003G188200 Sobic003G188200 Sobic010G177800--Sobic003G188200 Sobic002G108500 Sobic002G108500 Sobic010G177800--Sobic002G108500 Sobic009G187400--Sobic008G089900 Sobic001G414500 Sobic001G414500 Sobic009G187400--Sobic001G414500 Sobic006G261300 Sobic006G261300 Sobic009G187400--Sobic006G261300 Sobic001G143000 Sobic001G143000 Sobic009G187400--Sobic001G143000 Sobic009G187400--Sobic003G437800 Sobic009G187400--Sobic002G001000 Sobic009G187400--Sobic002G072100 Sobic009G187400--Sobic007G227700 Sobic009G187400--Sobic001G029200 Sobic004G207400--Sobic002G072400 Sobic006G232600 Sobic006G232600 Sobic004G207400--Sobic006G232600 Sobic004G207400--Sobic004G238200 Sobic009G170200 Sobic009G170200 Sobic004G207400--Sobic009G170200 Sobic003G203300 Sobic003G203300 Sobic004G207400--Sobic003G203300 Sobic002G225100 Sobic002G225100 Sobic004G207400--Sobic002G225100 Sobic004G300100 Sobic004G300100 Sobic004G207400--Sobic004G300100 Sobic004G207400--Sobic004G281900 Sobic004G207400--Sobic007G166200
Octagon: transcription factors


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