Gene annotation
Transcriptome id Sobic.005G186700.1
Synonym Sb05g024450, scpl26
Functional annotation OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
UniProt C5Y6D0 , Q9XE81
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF71
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT2G35780 : serine carboxypeptidase-like 26
RAP-DB (Rice) LOC_Os01g06490.1 : OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a026989
Brachypodium -
Barley -
Wheat TraesCS3B02G155800 , TraesCS5B02G242500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G140700 "aldo/keto reductase (AKR) family protein, up-regulated under drought stress , maped into a unique stay green QTL(QSTG3_6)"(PubMedID : 24655390)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
2 Sobic.006G243200 L-asparaginase precursor protein, putative, expressed K13051: ASRGL1, L-asparaginase / beta-aspartyl-peptidase
3 Sobic.003G097500 - -
4 Sobic.003G397600 expressed protein -
5 Sobic.008G004700 NC domain-containing protein, putative, expressed -
6 Sobic.004G051100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
7 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
8 Sobic.002G046900 HNH endonuclease domain-containing protein, putative, expressed -
9 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
10 Sobic.006G026100 expressed protein -
11 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
12 Sobic.003G328100 expressed protein -
13 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
14 Sobic.002G025700 lectin-like receptor kinase, putative, expressed -
15 Sobic.002G136100 genetic modifier, putative, expressed -
16 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
17 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
18 Sobic.006G145700 Probable inactive beta-glucosidase 14 (Precursor)(PubMedID : 26186930)@Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed K05350: beta-glucosidase
19 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
20 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin


Gene co-expression network
sample Sobic005G186700 Sobic005G186700 Sobic006G140700 Sobic006G140700 Sobic005G186700--Sobic006G140700 Sobic006G243200 Sobic006G243200 Sobic005G186700--Sobic006G243200 Sobic003G097500 Sobic003G097500 Sobic005G186700--Sobic003G097500 Sobic003G397600 Sobic003G397600 Sobic005G186700--Sobic003G397600 Sobic008G004700 Sobic008G004700 Sobic005G186700--Sobic008G004700 Sobic004G051100 Sobic004G051100 Sobic005G186700--Sobic004G051100 Sobic003G284800 Sobic003G284800 Sobic005G186700--Sobic003G284800 Sobic002G046900 Sobic002G046900 Sobic005G186700--Sobic002G046900 Sobic007G169100 Sobic007G169100 Sobic005G186700--Sobic007G169100 Sobic006G025400 Sobic006G025400 Sobic006G140700--Sobic006G025400 Sobic003G328100 Sobic003G328100 Sobic006G140700--Sobic003G328100 Sobic006G140700--Sobic007G169100 Sobic002G061900 Sobic002G061900 Sobic006G140700--Sobic002G061900 Sobic001G118400 Sobic001G118400 Sobic006G140700--Sobic001G118400 Sobic004G165900 Sobic004G165900 Sobic006G140700--Sobic004G165900 Sobic006G097500 Sobic006G097500 Sobic006G140700--Sobic006G097500 Sobic006G155500 Sobic006G155500 Sobic006G140700--Sobic006G155500 Sobic010G231500 Sobic010G231500 Sobic006G140700--Sobic010G231500 Sobic006G243200--Sobic005G186700 Sobic003G096500 Sobic003G096500 Sobic006G243200--Sobic003G096500 Sobic006G243200--Sobic004G051100 Sobic006G164300 Sobic006G164300 Sobic006G243200--Sobic006G164300 Sobic006G020200 Sobic006G020200 Sobic006G243200--Sobic006G020200 Sobic006G123500 Sobic006G123500 Sobic006G243200--Sobic006G123500 Sobic009G202400 Sobic009G202400 Sobic006G243200--Sobic009G202400 Sobic004G019100 Sobic004G019100 Sobic006G243200--Sobic004G019100 Sobic004G019400 Sobic004G019400 Sobic006G243200--Sobic004G019400 Sobic003G097500--Sobic003G328100 Sobic003G097500--Sobic007G169100 Sobic006G226601 Sobic006G226601 Sobic003G097500--Sobic006G226601 Sobic004G006400 Sobic004G006400 Sobic003G097500--Sobic004G006400 Sobic003G097500--Sobic006G140700 Sobic001G276300 Sobic001G276300 Sobic003G097500--Sobic001G276300 Sobic001G104600 Sobic001G104600 Sobic003G097500--Sobic001G104600 Sobic007G053800 Sobic007G053800 Sobic003G097500--Sobic007G053800 Sobic001G517700 Sobic001G517700 Sobic003G097500--Sobic001G517700 Sobic002G136100 Sobic002G136100 Sobic003G397600--Sobic002G136100 Sobic003G397600--Sobic003G328100 Sobic001G314400 Sobic001G314400 Sobic003G397600--Sobic001G314400 Sobic008G046400 Sobic008G046400 Sobic003G397600--Sobic008G046400 Sobic006G145700 Sobic006G145700 Sobic003G397600--Sobic006G145700 Sobic003G397600--Sobic006G140700 Sobic003G437800 Sobic003G437800 Sobic003G397600--Sobic003G437800 Sobic010G177800 Sobic010G177800 Sobic003G397600--Sobic010G177800 Sobic003G329700 Sobic003G329700 Sobic003G397600--Sobic003G329700 Sobic010G269400 Sobic010G269400 Sobic008G004700--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic008G004700--Sobic010G058200 Sobic008G004700--Sobic002G046900 Sobic001G286600 Sobic001G286600 Sobic008G004700--Sobic001G286600 Sobic010G035500 Sobic010G035500 Sobic008G004700--Sobic010G035500 Sobic006G258700 Sobic006G258700 Sobic008G004700--Sobic006G258700 Sobic008G004700--Sobic002G136100 Sobic008G004700--Sobic003G284800 Sobic006G110900 Sobic006G110900 Sobic008G004700--Sobic006G110900 Sobic006G188000 Sobic006G188000 Sobic004G051100--Sobic006G188000 Sobic002G211000 Sobic002G211000 Sobic004G051100--Sobic002G211000 Sobic007G034300 Sobic007G034300 Sobic004G051100--Sobic007G034300 Sobic010G245200 Sobic010G245200 Sobic004G051100--Sobic010G245200 Sobic005G202500 Sobic005G202500 Sobic004G051100--Sobic005G202500 Sobic004G051100--Sobic001G517700 Sobic002G370600 Sobic002G370600 Sobic004G051100--Sobic002G370600 Sobic004G283100 Sobic004G283100 Sobic004G051100--Sobic004G283100 Sobic004G051100--Sobic007G053800 Sobic002G112400 Sobic002G112400 Sobic003G284800--Sobic002G112400 Sobic009G062400 Sobic009G062400 Sobic003G284800--Sobic009G062400 Sobic003G253300 Sobic003G253300 Sobic003G284800--Sobic003G253300 Sobic006G265900 Sobic006G265900 Sobic003G284800--Sobic006G265900 Sobic003G284800--Sobic002G061900 Sobic003G284800--Sobic006G097500 Sobic003G284800--Sobic007G053800 Sobic001G128600 Sobic001G128600 Sobic003G284800--Sobic001G128600 Sobic008G006100 Sobic008G006100 Sobic003G284800--Sobic008G006100 Sobic006G201100 Sobic006G201100 Sobic002G046900--Sobic006G201100 Sobic005G175600 Sobic005G175600 Sobic002G046900--Sobic005G175600 Sobic002G046900--Sobic010G035500 Sobic002G046900--Sobic006G110900 Sobic004G224500 Sobic004G224500 Sobic002G046900--Sobic004G224500 Sobic002G046900--Sobic006G123500 Sobic010G207500 Sobic010G207500 Sobic002G046900--Sobic010G207500 Sobic001G404500 Sobic001G404500 Sobic002G046900--Sobic001G404500 Sobic005G203300 Sobic005G203300 Sobic002G046900--Sobic005G203300 Sobic007G169100--Sobic003G328100 Sobic007G169100--Sobic002G061900 Sobic007G169100--Sobic006G097500 Sobic007G169100--Sobic006G265900 Sobic007G169100--Sobic010G231500 Sobic007G169100--Sobic006G140700 Sobic006G063900 Sobic006G063900 Sobic007G169100--Sobic006G063900 Sobic005G028800 Sobic005G028800 Sobic007G169100--Sobic005G028800 Sobic007G169100--Sobic006G155500
Octagon: transcription factors


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