Gene annotation
Transcriptome id Sobic.002G321300.1,Sobic.002G321300.3,Sobic.002G321300.2
Synonym Sb02g034950, ATPDR11, PDR11
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
pleiotropic drug resistance protein, putative, expressed
UniProt A0A1B6QEM8 , A0A1W0W6P9 , A0A1B6QEL2
Pfam PF08370 PF00005 PF01061 PF14510 PF08370 PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF307
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT2G36380 : pleiotropic drug resistance 6,pleiotropic drug resistance 11
RAP-DB (Rice) LOC_Os11g37700.1 : pleiotropic drug resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a048236
Brachypodium KQK15967 , KQK15968 , KQK11911 , KQK11913 , KQK11912
Barley HORVU7Hr1G037750.6 , HORVU5Hr1G106850.34 , HORVU5Hr1G106850.33 , HORVU5Hr1G106850.32 , HORVU5Hr1G106850.30 , HORVU5Hr1G106850.35 , HORVU5Hr1G106850.20 , HORVU5Hr1G106850.21 , HORVU5Hr1G106850.22 , HORVU5Hr1G106850.23 , HORVU5Hr1G106850.24 , HORVU5Hr1G106850.25 , HORVU5Hr1G106850.26 , HORVU5Hr1G106850.27 , HORVU5Hr1G106850.28 , HORVU5Hr1G106850.29 , HORVU5Hr1G106850.15 , HORVU5Hr1G106850.14 , HORVU5Hr1G106850.17 , HORVU5Hr1G106850.16 , HORVU5Hr1G106850.11 , HORVU5Hr1G106850.10 , HORVU5Hr1G106850.13 , HORVU5Hr1G106850.12 , HORVU5Hr1G106850.19 , HORVU5Hr1G106850.18 , HORVU7Hr1G037750.19 , HORVU7Hr1G037750.18 , HORVU7Hr1G037750.17 , HORVU7Hr1G037750.16 , HORVU7Hr1G037750.15 , HORVU7Hr1G037750.14 , HORVU7Hr1G037750.12 , HORVU7Hr1G037750.11 , HORVU7Hr1G037750.10 , HORVU5Hr1G106850.1 , HORVU5Hr1G106850.3 , HORVU5Hr1G106850.2 , HORVU5Hr1G106850.5 , HORVU5Hr1G106850.4 , HORVU5Hr1G106850.7 , HORVU5Hr1G106850.6 , HORVU5Hr1G106850.9 , HORVU5Hr1G106850.8 , HORVU5Hr1G124650.9 , HORVU5Hr1G124650.8 , HORVU5Hr1G124650.7 , HORVU5Hr1G124650.6 , HORVU5Hr1G124650.5 , HORVU5Hr1G124650.4 , HORVU5Hr1G124650.3 , HORVU7Hr1G037750.5 , HORVU7Hr1G037750.4 , HORVU7Hr1G037750.3 , HORVU7Hr1G037750.2 , HORVU7Hr1G037750.9 , HORVU7Hr1G037750.8 , HORVU5Hr1G124650.15 , HORVU5Hr1G124650.14 , HORVU5Hr1G124650.13 , HORVU5Hr1G124650.12 , HORVU5Hr1G124650.11 , HORVU5Hr1G124650.10 , HORVU7Hr1G037750.26 , HORVU7Hr1G037750.24 , HORVU7Hr1G037750.25 , HORVU7Hr1G037750.22 , HORVU7Hr1G037750.23 , HORVU7Hr1G037750.20 , HORVU7Hr1G037750.21
Wheat TraesCS5A02G447200 , TraesCS7D02G185700 , TraesCS7D02G185700 , TraesCS5B02G449500 , TraesCS5A02G016200 , TraesCS4A02G331100 , TraesCS7B02G088800 , TraesCS5D02G023400 , TraesCS5D02G564000 , TraesCS5D02G452500 , TraesCS7A02G183900 , TraesCS2D02G051800 , TraesCS2D02G051800 , TraesCS2B02G606700 , TraesCS7B02G000200 , TraesCS5B02G572600 , TraesCS2B02G606700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G160800 integral membrane protein DUF6 containing protein, expressed -
2 Sobic.004G276200 peptide transporter PTR2, putative, expressed -
3 Sobic.002G417300 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
5 Sobic.007G213100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@citrate transporter, putative, expressed K14445: solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
6 Sobic.003G298600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
7 Sobic.010G177800 RALFL28 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
8 Sobic.007G146400 chaperonin Cpn60/TCP-1, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
9 Sobic.010G090301 - -
10 Sobic.008G171000 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
11 Sobic.004G323400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine esterase family protein, putative, expressed -
12 Sobic.009G082000 TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.010G102800 STELAR K+ outward rectifier(PubMedID : 26465154)@similar to Potassium outward rectifying channel(PubMedID : 29862293)@potassium channel SKOR, putative, expressed -
14 Sobic.004G017000 leucine rich repeat protein, putative, expressed -
15 Sobic.009G069300 actin binding protein family(PubMedID : 26465154)@AR791, putative, expressed -
16 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
17 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
18 Sobic.009G183101 - -
19 Sobic.001G413000 ABC transporter family protein, putative, expressed -
20 Sobic.004G006800 expressed protein -


Gene co-expression network
sample Sobic002G321300 Sobic002G321300 Sobic001G160800 Sobic001G160800 Sobic002G321300--Sobic001G160800 Sobic004G276200 Sobic004G276200 Sobic002G321300--Sobic004G276200 Sobic002G417300 Sobic002G417300 Sobic002G321300--Sobic002G417300 Sobic003G339700 Sobic003G339700 Sobic002G321300--Sobic003G339700 Sobic007G213100 Sobic007G213100 Sobic002G321300--Sobic007G213100 Sobic003G298600 Sobic003G298600 Sobic002G321300--Sobic003G298600 Sobic010G177800 Sobic010G177800 Sobic002G321300--Sobic010G177800 Sobic007G146400 Sobic007G146400 Sobic002G321300--Sobic007G146400 Sobic010G090301 Sobic010G090301 Sobic002G321300--Sobic010G090301 Sobic004G207400 Sobic004G207400 Sobic001G160800--Sobic004G207400 Sobic001G160800--Sobic003G339700 Sobic001G160800--Sobic002G417300 Sobic005G028800 Sobic005G028800 Sobic001G160800--Sobic005G028800 Sobic001G160800--Sobic007G146400 Sobic007G124500 Sobic007G124500 Sobic001G160800--Sobic007G124500 Sobic002G225100 Sobic002G225100 Sobic001G160800--Sobic002G225100 Sobic001G509200 Sobic001G509200 Sobic001G160800--Sobic001G509200 Sobic004G271600 Sobic004G271600 Sobic001G160800--Sobic004G271600 Sobic001G391300 Sobic001G391300 Sobic004G276200--Sobic001G391300 Sobic009G183101 Sobic009G183101 Sobic004G276200--Sobic009G183101 Sobic008G014200 Sobic008G014200 Sobic004G276200--Sobic008G014200 Sobic004G276200--Sobic003G339700 Sobic010G212100 Sobic010G212100 Sobic004G276200--Sobic010G212100 Sobic004G097300 Sobic004G097300 Sobic004G276200--Sobic004G097300 Sobic004G276200--Sobic010G090301 Sobic009G069300 Sobic009G069300 Sobic004G276200--Sobic009G069300 Sobic004G276200--Sobic002G321300 Sobic004G323400 Sobic004G323400 Sobic002G417300--Sobic004G323400 Sobic002G417300--Sobic003G339700 Sobic002G417300--Sobic007G146400 Sobic002G417300--Sobic001G160800 Sobic003G425300 Sobic003G425300 Sobic002G417300--Sobic003G425300 Sobic002G275100 Sobic002G275100 Sobic002G417300--Sobic002G275100 Sobic002G295100 Sobic002G295100 Sobic002G417300--Sobic002G295100 Sobic007G121300 Sobic007G121300 Sobic002G417300--Sobic007G121300 Sobic004G189200 Sobic004G189200 Sobic002G417300--Sobic004G189200 Sobic003G339700--Sobic002G417300 Sobic003G381700 Sobic003G381700 Sobic003G339700--Sobic003G381700 Sobic008G187100 Sobic008G187100 Sobic003G339700--Sobic008G187100 Sobic003G339700--Sobic007G146400 Sobic003G339700--Sobic001G160800 Sobic003G334000 Sobic003G334000 Sobic003G339700--Sobic003G334000 Sobic001G057700 Sobic001G057700 Sobic003G339700--Sobic001G057700 Sobic003G339700--Sobic009G069300 Sobic006G066800 Sobic006G066800 Sobic003G339700--Sobic006G066800 Sobic007G213100--Sobic002G321300 Sobic003G051000 Sobic003G051000 Sobic007G213100--Sobic003G051000 Sobic007G213100--Sobic007G146400 Sobic007G213100--Sobic003G339700 Sobic007G213100--Sobic001G160800 Sobic001G284475 Sobic001G284475 Sobic007G213100--Sobic001G284475 Sobic007G213100--Sobic009G069300 Sobic010G251300 Sobic010G251300 Sobic007G213100--Sobic010G251300 Sobic008G171000 Sobic008G171000 Sobic007G213100--Sobic008G171000 Sobic005G087900 Sobic005G087900 Sobic003G298600--Sobic005G087900 Sobic003G298600--Sobic003G339700 Sobic003G298600--Sobic007G146400 Sobic002G211800 Sobic002G211800 Sobic003G298600--Sobic002G211800 Sobic003G362600 Sobic003G362600 Sobic003G298600--Sobic003G362600 Sobic009G066900 Sobic009G066900 Sobic003G298600--Sobic009G066900 Sobic010G186700 Sobic010G186700 Sobic003G298600--Sobic010G186700 Sobic001G251200 Sobic001G251200 Sobic003G298600--Sobic001G251200 Sobic002G110300 Sobic002G110300 Sobic003G298600--Sobic002G110300 Sobic006G145700 Sobic006G145700 Sobic010G177800--Sobic006G145700 Sobic010G178000 Sobic010G178000 Sobic010G177800--Sobic010G178000 Sobic003G397600 Sobic003G397600 Sobic010G177800--Sobic003G397600 Sobic008G046400 Sobic008G046400 Sobic010G177800--Sobic008G046400 Sobic007G215500 Sobic007G215500 Sobic010G177800--Sobic007G215500 Sobic008G115700 Sobic008G115700 Sobic010G177800--Sobic008G115700 Sobic006G041000 Sobic006G041000 Sobic010G177800--Sobic006G041000 Sobic003G188200 Sobic003G188200 Sobic010G177800--Sobic003G188200 Sobic002G108500 Sobic002G108500 Sobic010G177800--Sobic002G108500 Sobic007G146400--Sobic001G057700 Sobic005G132000 Sobic005G132000 Sobic007G146400--Sobic005G132000 Sobic006G257800 Sobic006G257800 Sobic007G146400--Sobic006G257800 Sobic002G383600 Sobic002G383600 Sobic007G146400--Sobic002G383600 Sobic006G051800 Sobic006G051800 Sobic007G146400--Sobic006G051800 Sobic009G074400 Sobic009G074400 Sobic007G146400--Sobic009G074400 Sobic004G231900 Sobic004G231900 Sobic007G146400--Sobic004G231900 Sobic007G146400--Sobic003G339700 Sobic007G146400--Sobic002G417300 Sobic010G090301--Sobic002G417300 Sobic010G090301--Sobic004G276200 Sobic010G090301--Sobic004G323400 Sobic010G090301--Sobic009G183101 Sobic001G426800 Sobic001G426800 Sobic010G090301--Sobic001G426800 Sobic010G090301--Sobic002G321300 Sobic010G090301--Sobic003G339700 Sobic010G090301--Sobic008G014200 Sobic010G090301--Sobic007G146400
Octagon: transcription factors


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